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CAN33_45435-T1, CAN33_45435-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_45435-T1
Unique NameCAN33_45435-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000022.1:2021970..2022626+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_45435-T1 ID=CAN33_45435-T1|Name=CAN33_45435-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=657bp|location=Sequence derived from alignment at NKJJ01000022.1:2021970..2022626+ (Aspergillus niger FDAARGOS_311)
ATGACTCAACCCAACCCTTACGTTCTGGCCGCCGACAACCCGGGCGCCGT
CCTGACTCTGTTGCAGTCCAACCCCTCCATCGCCTCGAACCAGGACGAGC
ACGGATATTCATTACTCCATGCTGCGGCTTCATACGGACACATCGACCTG
CTACGCGCCCTTGTCAAGGACTACAACGTGGACGTCAACCTGCTCGACGA
GGACGGTGAAACCTGCCTGTTTGTGACGGAAAGCCTCGACATTGCGAAGT
GCCTTGTTGAGGAATTGGGCGTGGACTACAACAAGAGAAACGACGAGGGC
CTCGCAGCCTATGAGACTATCGAGAGCGATGGCTCGTTCCCGCAAATCGC
TGCTTACCTGCGGCAAGTCGCCGGTGTGCCAGAACCTGCCGCTGACTCGG
CTGACGACGCACTAAACCCGGCCCCTCCGCTTCCCCCGAATATCCAGATG
AACCTGGGCACGGTGTCGGAACAGGAGGCGAGTGCAGGAATGGATGAGGT
CGACCCGGAGTTCAAGCGGCGCATCGATGAGCTTGCGGCGCGGGAGGATT
TCCACAGCGAAGCTACGCAGAATCAGCTGCGCCAGTTGGTCATGGATGCT
ATTTCGGGGTCCGGCATTAACACTCAGGAGCGGGATGTGCGGCGCAGGAC
GGATTAA
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Coding sequence (CDS) from alignment at NKJJ01000022.1:2021970..2022626+

>CAN33_45435-T1 ID=CAN33_45435-T1|Name=CAN33_45435-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=657bp|location=Sequence derived from alignment at NKJJ01000022.1:2021970..2022626+ (Aspergillus niger FDAARGOS_311)
ATGACTCAACCCAACCCTTACGTTCTGGCCGCCGACAACCCGGGCGCCGT
CCTGACTCTGTTGCAGTCCAACCCCTCCATCGCCTCGAACCAGGACGAGC
ACGGATATTCATTACTCCATGCTGCGGCTTCATACGGACACATCGACCTG
CTACGCGCCCTTGTCAAGGACTACAACGTGGACGTCAACCTGCTCGACGA
GGACGGTGAAACCTGCCTGTTTGTGACGGAAAGCCTCGACATTGCGAAGT
GCCTTGTTGAGGAATTGGGCGTGGACTACAACAAGAGAAACGACGAGGGC
CTCGCAGCCTATGAGACTATCGAGAGCGATGGCTCGTTCCCGCAAATCGC
TGCTTACCTGCGGCAAGTCGCCGGTGTGCCAGAACCTGCCGCTGACTCGG
CTGACGACGCACTAAACCCGGCCCCTCCGCTTCCCCCGAATATCCAGATG
AACCTGGGCACGGTGTCGGAACAGGAGGCGAGTGCAGGAATGGATGAGGT
CGACCCGGAGTTCAAGCGGCGCATCGATGAGCTTGCGGCGCGGGAGGATT
TCCACAGCGAAGCTACGCAGAATCAGCTGCGCCAGTTGGTCATGGATGCT
ATTTCGGGGTCCGGCATTAACACTCAGGAGCGGGATGTGCGGCGCAGGAC
GGATTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_45435CAN33_45435Aspergillus niger FDAARGOS_311gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_45435-T1.exon1CAN33_45435-T1.exon1Aspergillus niger FDAARGOS_311exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_45435-T1.cdsCAN33_45435-T1.cdsAspergillus niger FDAARGOS_311CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_45435-T1CAN33_45435-T1-proteinAspergillus niger FDAARGOS_311polypeptide


Properties
Property NameValue
NoteBUSCO:EOG09265313
DBxrefInterPro:IPR020683
DBxrefInterPro:IPR036770
DBxrefInterPro:IPR002110
DBxrefPFAM:PF13857
DBxrefPFAM:PF13637
DBxrefPFAM:PF13606
DBxrefPFAM:PF12796
ProductAnkyrin repeats (many copies) family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000022.1supercontigNKJJ01000022.1:2021970..2022626 +
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