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Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000022.1:3795026..3796086+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_48215-T1 ID=CAN33_48215-T1|Name=CAN33_48215-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1061bp|location=Sequence derived from alignment at NKJJ01000022.1:3795026..3796086+ (Aspergillus niger FDAARGOS_311)
ATGTGGGGAGATCATGCGCAAATTCAGCGTAGAAAGAAAAACTGCCTGCG
AAACTTCCAGTCGGCCCCGCAACCCCGCTAACCGTTTCACCAACAGGTAA
AAAGCGCTTCGAACTCGCCTGCTACAAGAACAAACTCCTCGAGTACCGCT
CCGGAGCAGAGAAGGATCTCGACAATGTCCTCCAAGTCCCCACGATCTTC
CTGTCGGTTTCCAAAGCGCAAACAGCCCCATCCGCCGAGTTAACAAAGGC
CTTCGGCGCCGACACGCCTGCAGATGAGATCCGGCAAGAAATTCTACGAA
AGGGTGAAGTGCAAGTTGGCGAGCGTGAGCGCAAGGAAATCATCGAGCGC
GTGGAGAAGGAGGTGTTGGATATCGTATCAGGACGGCTTGTTGATCCTAC
GACGAAGCGAGTCTATACCCCCGGAATGATTTCCAAGGCCTTGGACCAGC
TCAGCTCGGCTAGTGGTCAACAGCAGTCGCAAACGTCTGGCAATGGGGAG
ACTAATGGGGACGACAGCGAGGAGAGCCGCCCGAGGAAACCGCTCTGGAC
GGGTGTGACGGCCAACAAGTCGGCGAAGAGTCAAGCGCTTGAAGCTATGA
AGGCGCTTATTGCATGGCAACCTATCCCTGTGATGCGGGCGCGGATGCGC
CTCCGTGTCACCTGTCCTGTGTCACTGTTGAAGCAGAGTGTTAAGGGTGG
TGCGGCCGGTGGTGCTGCCGCGGGTGGTAAAGAAAAGGAGGCGCCGTCCA
AGAGCGGCTCCAAGTCGAACAAGAAGGGTGGAAAGGGGTCCAAGAAAGCC
CGTCAGCAGGAATCCGAGGATGAGGCAGGTGGATCTGACGCAGAGTCCGC
ACCTGCCAAGGGTCCGAGCAATGTCAAGGATAAGATCCTGAGCTATATCG
AATCTATTGAGGCTCAGGAGGTTGTCGGCGGAGACGAGTGGGAGATCATT
GGCTTTGCTGAGCCGGGAGCTTTCAAGGGATTGAATGAATTTGTGGGCAA
CGAGACCCGGGGCAGAGGACGTGTGGAGGTGCTGGATATGACGGTGACCC
ATGAAGAGTAA back to topCoding sequence (CDS) from alignment at NKJJ01000022.1:3795026..3796086+ >CAN33_48215-T1 ID=CAN33_48215-T1|Name=CAN33_48215-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=1986bp|location=Sequence derived from alignment at NKJJ01000022.1:3795026..3796086+ (Aspergillus niger FDAARGOS_311)
ATGTGGGGAGATCATGCGCAAATTCAGCGTAAAAAGCGCTTCGAACTCGC
CTGCTACAAGAACAAACTCCTCGAGTACCGCTCCGGAGCAGAGAAGGATC
TCGACAATGTCCTCCAAGTCCCCACGATCTTCCTGTCGGTTTCCAAAGCG
CAAACAGCCCCATCCGCCGAGTTAACAAAGGCCTTCGGCGCCGACACGCC
TGCAGATGAGATCCGGCAAGAAATTCTACGAAAGGGTGAAGTGCAAGTTG
GCGAGCGTGAGCGCAAGGAAATCATCGAGCGCGTGGAGAAGGAGGTGTTG
GATATCGTATCAGGACGGCTTGTTGATCCTACGACGAAGCGAGTCTATAC
CCCCGGAATGATTTCCAAGGCCTTGGACCAGCTCAGCTCGGCTAGTGGTC
AACAGCAGTCGCAAACGTCTGGCAATGGGGAGACTAATGGGGACGACAGC
GAGGAGAGCCGCCCGAGGAAACCGCTCTGGACGGGTGTGACGGCCAACAA
GTCGGCGAAGAGTCAAGCGCTTGAAGCTATGAAGGCGCTTATTGCATGGC
AACCTATCCCTGTGATGCGGGCGCGGATGCGCCTCCGTGTCACCTGTCCT
GTGTCACTGTTGAAGCAGAGTGTTAAGGGTGGTGCGGCCGGTGGTGCTGC
CGCGGGTGGTAAAGAAAAGGAGGCGCCGTCCAAGAGCGGCTCCAAGTCGA
ACAAGAAGGGTGGAAAGGGGTCCAAGAAAGCCCGTCAGCAGGAATCCGAG
GATGAGGCAGGTGGATCTGACGCAGAGTCCGCACCTGCCAAGGGTCCGAG
CAATGTCAAGGATAAGATCCTGAGCTATATCGAATCTATTGAGGCTCAGG
AGGTTGTCGGCGGAGACGAGTGGGAGATCATTGGCTTTGCTGAGCCGGGA
GCTTTCAAGGGATTGAATGAATTTGTGGGCAACGAGACCCGGGGCAGAGG
ACGTGTGGAGGTGCTGGATATGACGGTGACCCATGAAGAGTAAATGTGGG
GAGATCATGCGCAAATTCAGCGTAAAAAGCGCTTCGAACTCGCCTGCTAC
AAGAACAAACTCCTCGAGTACCGCTCCGGAGCAGAGAAGGATCTCGACAA
TGTCCTCCAAGTCCCCACGATCTTCCTGTCGGTTTCCAAAGCGCAAACAG
CCCCATCCGCCGAGTTAACAAAGGCCTTCGGCGCCGACACGCCTGCAGAT
GAGATCCGGCAAGAAATTCTACGAAAGGGTGAAGTGCAAGTTGGCGAGCG
TGAGCGCAAGGAAATCATCGAGCGCGTGGAGAAGGAGGTGTTGGATATCG
TATCAGGACGGCTTGTTGATCCTACGACGAAGCGAGTCTATACCCCCGGA
ATGATTTCCAAGGCCTTGGACCAGCTCAGCTCGGCTAGTGGTCAACAGCA
GTCGCAAACGTCTGGCAATGGGGAGACTAATGGGGACGACAGCGAGGAGA
GCCGCCCGAGGAAACCGCTCTGGACGGGTGTGACGGCCAACAAGTCGGCG
AAGAGTCAAGCGCTTGAAGCTATGAAGGCGCTTATTGCATGGCAACCTAT
CCCTGTGATGCGGGCGCGGATGCGCCTCCGTGTCACCTGTCCTGTGTCAC
TGTTGAAGCAGAGTGTTAAGGGTGGTGCGGCCGGTGGTGCTGCCGCGGGT
GGTAAAGAAAAGGAGGCGCCGTCCAAGAGCGGCTCCAAGTCGAACAAGAA
GGGTGGAAAGGGGTCCAAGAAAGCCCGTCAGCAGGAATCCGAGGATGAGG
CAGGTGGATCTGACGCAGAGTCCGCACCTGCCAAGGGTCCGAGCAATGTC
AAGGATAAGATCCTGAGCTATATCGAATCTATTGAGGCTCAGGAGGTTGT
CGGCGGAGACGAGTGGGAGATCATTGGCTTTGCTGAGCCGGGAGCTTTCA
AGGGATTGAATGAATTTGTGGGCAACGAGACCCGGGGCAGAGGACGTGTG
GAGGTGCTGGATATGACGGTGACCCATGAAGAGTAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0042254 | ribosome biogenesis |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG0926400M |
| DBxref | InterPro:IPR019783 |
| DBxref | InterPro:IPR037188 |
| DBxref | InterPro:IPR036786 |
| DBxref | InterPro:IPR018978 |
| DBxref | PFAM:PF09377 |
| DBxref | PFAM:PF01172 |
| Product | SBDS protein C-terminal domain family protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| NKJJ01000022.1 | supercontig | NKJJ01000022.1:3795026..3796086 + |
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