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Sequences
The following sequences are available for this feature:
mRNA from alignment at ACJE01000021.1:1431348..1434622- Legend: polypeptideCDSexonthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >ASPNIDRAFT_119246-T1 ID=ASPNIDRAFT_119246-T1|Name=ASPNIDRAFT_119246-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=3275bp|location=Sequence derived from alignment at ACJE01000021.1:1431348..1434622- (Aspergillus niger ATCC 1015)
ATGGCGGCACTTGGCGATGATAGGATTCCGCCGGAGATGGACGACGCAGC
TTCCCAGTTCCGCCCGCGGAGACATGACGATGACGATGATGCTTCCGGAG
ACGACGATGTAGAGAGCACAACTAGTGCTCAGGCAGCCGACAACAAGAAT
CATCAGGGGCATTTTGAGGAGGAGAAAGAACTCCCGCCACATGCATGCGC
GTGAGTATATCGTGGCGTTTGCTCTGTTACATCTTGACTGACTTGGAGCT
CTTCCACAGGTATTGCGGCATTCATAACCCGAGCAGCGTAGTCAAGTGCC
TGGCCTGCAGCAAGTGGTTCTGCAGCGCCCGCGGTAACACCTCGTCCTCC
CATATTGTCAATCACCTCGTTCGGGCCCGCCACAAGGAAGTTCAGTTGCA
TCCGGCCTCATCGCTTGGGGATACGATATTGGAATGCTACAATTGCGGGA
CTAAGAACGTTTTTCTGCTTGGGTTCATTCCGGCCAAGTCTGACACGGTC
GTCGTATTGCTATGCCGTCAACCATGCGCCGCTATGCCATCTTCTAAGGA
TATGAACTGGGATACCTCCCGCTGGCAACCATTGATTGAAGACCGTTCGT
TCTTGCCATGGCTGGTTGCTGCCCCGTCCGACCAGGAACAGCTCCGCGCT
CGCCACCTCAGTCCGCAGTTGATTGCTAAGCTGGAAGAGATGTGGAAGGA
AAATTCTCAAGCGACATTCTCGGATTTGGAGAAGGCCACGGCTGTGGACG
ATGAGCCAGCACCTGTGCTTCTGCGTTATGATGATGCTTTCCAGTATCAG
AACATTTTTGGGCCTTTGGTCAAGATTGAGGCCGACTATGACCGCAAGTT
GAAGGAATCCCAATCGCAGGATGGACTGATCGTGCGCTGGGACCTTGGTC
TCAACAACAAGCATCTGGCTAGCTTCATTTTGCCTAAGCTCGAACTTGGC
GATGTTAAATTGGCCGTGGGAGATGAAATGCGCCTCAAGTATACCGGCGA
ACTGCGGCCCAAATGGGAAGGAGTTGGATATGTCATTAAAATTCCGAACA
ACCAGTCCGATGAAGTGACGATTGAGTTACGCGCAAAGGGTGATCATAAG
TCTGTGCCTACAGAGTGCACGCACAATTTCACAGTTGACTACGTCTGGAA
GTCTACATCATTTGATCGTATGCAGCTGGCTATGAAAACATTTGCCGTGG
ATGAGATGAGTGTGTCTGGTTACATTTTCCATCGCCTTCTCGGACACGAA
GTCGCAGCCGCGCCGATGAAGACCCAAATGCCGAAGAAGTTCAGCGTTCC
GGGACTTCCAGAACTCAACGGTAGTCAGATTAACGCTGTGAAGAGCGTGC
TGCAGAGACCTTTGAGTTTGATTCAAGGACCTCCGGGAACGGGAAAGACT
GTCACCTCGGCTACGATCATCTACCATCTTGCGAAGATCAACGGTGGTCA
GGTGTTGGTGTGCGCCCCCTCGAACGTTGCGGTTGACCAACTTTGTGAGC
GTATCCATCGGACAGGTCTGAAGACTGTGCGTGTGACAGCTAAATCGCGA
GAGGATGTTGAATCGCCGGTTGGCTTCTTGTCCTTGCACGAACAAGTCCG
CATCAACGATACCAACATCGAACTCATTAAGCTCAATCAGCTCAAGGCCG
AGCTTGGAGAGTTGTCCAGTCAAGATGAGAAACGACTGAAACAGCTGACC
CGCTCGGCGGAGCGCGAGATCTTGAATAACGCCGACGTAATCTGCTGTAC
TTGCGTTGGTGCTGGTGATCCTCGTCTGGCGAAGCTCAAGTTCCGTACCG
TCCTGATTGACGAATCGACCCAGTCGGCTGAGCCAGAATGTATGATTCCC
TTGGTTCTCGGATGCAAGCAAGTAGTCCTTGTCGGCGATCACCAACAGCT
GGGACCTGTCATCATGAACAAGAAGGCAGCTAAGGCTGGTCTTAACCAGT
CACTTTTCGAACGTCTCGTCATTCTTGGCTGCTCCCCTATTCGTCTTAAC
GTTCAGTACCGTATGCACCCGTGCCTGTCGGAGTTCCCGTCGAACATGTT
CTATGAAGGTTCTCTACAGAACGGTATCTCTTCGTTTGAGCGTCTCCGCC
GTGACGTCGACTTCCCCTGGCCCATTGCCGATAACCCTATGATGTTCTGG
TCGAACCTGGGTAACGAGGAGATTTCGGCCTCCGGAACCTCTTACCTTAA
CCGCACTGAAGCGACGAACGTGGAGAAAATTGTCACCCGCTTCTTCAAAG
CTGGAGTGCAGCCCCAGGACATTGGTATTATCACTCCTTATGAGGGTCAG
CGCAGCTACATTGTTAGCTCTATGCAAGCTAATGGCACCTTCAAGAAAGA
GCATTACAAGGAGATCGAGGTGGCTTCGGTCGATGCCTTCCAGGGTCGTG
AGAAGGACTTCATCATCCTTTCTTGTGTGCGTTCCAACGACCACCAGGGT
ATTGGTTTCTTAAGTGATCCTCGCCGTCTCAACGTCGCTCTCACTCGTGC
CAAGTATGGTCTGGCCATCCTTGGAAACCCGAAGGTCTTGTCGAAGCATC
CTTTGTGGAACTGTCTCCTGCAGCATTTCAAGGAAAGGCACTGCCTGGTT
GAGGGACCCTTGTCTAACCTGCAAGAGTCTTTGATCCAATTCAGCCGACC
TAAGCAGGCATACCGGGGTCCCCAGCGGTTCCAGATGGCTTACAACCATG
CTTCTAATGTTACCAGCGGGTTGATGAATGGAAGGAACGGTCAGCGCAAT
GACTTCCATGACACCGGCTCAGTGGTTGGTTACATCCCCGATGATGTCTC
TTCCGTCCACTCCTCTGCCCTGGGCGGGGTTGGCATTCCCTCTGGTTATC
CTCCCATGTTCCAGAATTTCGCGGACGCGTGGCCCGCTCTTCCCGGAGCC
CGTCGGGCCAATGGTAACCGTATGAAGGGAGCACCTAGCATTGCCGGAGA
ATCTGTGGCAGCCACCGAGTCCGATGTTACTGGAAGCATCATTGATGGGA
AGAGCGTCGACCAAGGTGGTGTCAGCCTTGCTGGCTTGAGCATCAACGAT
ATGGGCAAGCAGCCCAGTCTCAGTCAGTCCGATCGGCTGAAGCGCTACGT
GGAATCCGGAGGCCGGGAGCCTTACAAGCCCGGTGTTCCCGATAACGGCA
GCATTTTTGGCGGAAGCTCTGCTAGCATTCGTGTCACTCGTGGTGTGCCA
GGCCACATTCACGATGACGATGATACGCGCAGTGTTTCGACTGCATTCGC
CAGTCAGGTTGGGGGCAACTATGAT back to topCoding sequence (CDS) from alignment at ACJE01000021.1:1431348..1434622- >ASPNIDRAFT_119246-T1 ID=ASPNIDRAFT_119246-T1|Name=ASPNIDRAFT_119246-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=6428bp|location=Sequence derived from alignment at ACJE01000021.1:1431348..1434622- (Aspergillus niger ATCC 1015)
GTATTGCGGCATTCATAACCCGAGCAGCGTAGTCAAGTGCCTGGCCTGCA
GCAAGTGGTTCTGCAGCGCCCGCGGTAACACCTCGTCCTCCCATATTGTC
AATCACCTCGTTCGGGCCCGCCACAAGGAAGTTCAGTTGCATCCGGCCTC
ATCGCTTGGGGATACGATATTGGAATGCTACAATTGCGGGACTAAGAACG
TTTTTCTGCTTGGGTTCATTCCGGCCAAGTCTGACACGGTCGTCGTATTG
CTATGCCGTCAACCATGCGCCGCTATGCCATCTTCTAAGGATATGAACTG
GGATACCTCCCGCTGGCAACCATTGATTGAAGACCGTTCGTTCTTGCCAT
GGCTGGTTGCTGCCCCGTCCGACCAGGAACAGCTCCGCGCTCGCCACCTC
AGTCCGCAGTTGATTGCTAAGCTGGAAGAGATGTGGAAGGAAAATTCTCA
AGCGACATTCTCGGATTTGGAGAAGGCCACGGCTGTGGACGATGAGCCAG
CACCTGTGCTTCTGCGTTATGATGATGCTTTCCAGTATCAGAACATTTTT
GGGCCTTTGGTCAAGATTGAGGCCGACTATGACCGCAAGTTGAAGGAATC
CCAATCGCAGGATGGACTGATCGTGCGCTGGGACCTTGGTCTCAACAACA
AGCATCTGGCTAGCTTCATTTTGCCTAAGCTCGAACTTGGCGATGTTAAA
TTGGCCGTGGGAGATGAAATGCGCCTCAAGTATACCGGCGAACTGCGGCC
CAAATGGGAAGGAGTTGGATATGTCATTAAAATTCCGAACAACCAGTCCG
ATGAAGTGACGATTGAGTTACGCGCAAAGGGTGATCATAAGTCTGTGCCT
ACAGAGTGCACGCACAATTTCACAGTTGACTACGTCTGGAAGTCTACATC
ATTTGATCGTATGCAGCTGGCTATGAAAACATTTGCCGTGGATGAGATGA
GTGTGTCTGGTTACATTTTCCATCGCCTTCTCGGACACGAAGTCGCAGCC
GCGCCGATGAAGACCCAAATGCCGAAGAAGTTCAGCGTTCCGGGACTTCC
AGAACTCAACGGTAGTCAGATTAACGCTGTGAAGAGCGTGCTGCAGAGAC
CTTTGAGTTTGATTCAAGGACCTCCGGGAACGGGAAAGACTGTCACCTCG
GCTACGATCATCTACCATCTTGCGAAGATCAACGGTGGTCAGGTGTTGGT
GTGCGCCCCCTCGAACGTTGCGGTTGACCAACTTTGTGAGCGTATCCATC
GGACAGGTCTGAAGACTGTGCGTGTGACAGCTAAATCGCGAGAGGATGTT
GAATCGCCGGTTGGCTTCTTGTCCTTGCACGAACAAGTCCGCATCAACGA
TACCAACATCGAACTCATTAAGCTCAATCAGCTCAAGGCCGAGCTTGGAG
AGTTGTCCAGTCAAGATGAGAAACGACTGAAACAGCTGACCCGCTCGGCG
GAGCGCGAGATCTTGAATAACGCCGACGTAATCTGCTGTACTTGCGTTGG
TGCTGGTGATCCTCGTCTGGCGAAGCTCAAGTTCCGTACCGTCCTGATTG
ACGAATCGACCCAGTCGGCTGAGCCAGAATGTATGATTCCCTTGGTTCTC
GGATGCAAGCAAGTAGTCCTTGTCGGCGATCACCAACAGCTGGGACCTGT
CATCATGAACAAGAAGGCAGCTAAGGCTGGTCTTAACCAGTCACTTTTCG
AACGTCTCGTCATTCTTGGCTGCTCCCCTATTCGTCTTAACGTTCAGTAC
CGTATGCACCCGTGCCTGTCGGAGTTCCCGTCGAACATGTTCTATGAAGG
TTCTCTACAGAACGGTATCTCTTCGTTTGAGCGTCTCCGCCGTGACGTCG
ACTTCCCCTGGCCCATTGCCGATAACCCTATGATGTTCTGGTCGAACCTG
GGTAACGAGGAGATTTCGGCCTCCGGAACCTCTTACCTTAACCGCACTGA
AGCGACGAACGTGGAGAAAATTGTCACCCGCTTCTTCAAAGCTGGAGTGC
AGCCCCAGGACATTGGTATTATCACTCCTTATGAGGGTCAGCGCAGCTAC
ATTGTTAGCTCTATGCAAGCTAATGGCACCTTCAAGAAAGAGCATTACAA
GGAGATCGAGGTGGCTTCGGTCGATGCCTTCCAGGGTCGTGAGAAGGACT
TCATCATCCTTTCTTGTGTGCGTTCCAACGACCACCAGGGTATTGGTTTC
TTAAGTGATCCTCGCCGTCTCAACGTCGCTCTCACTCGTGCCAAGTATGG
TCTGGCCATCCTTGGAAACCCGAAGGTCTTGTCGAAGCATCCTTTGTGGA
ACTGTCTCCTGCAGCATTTCAAGGAAAGGCACTGCCTGGTTGAGGGACCC
TTGTCTAACCTGCAAGAGTCTTTGATCCAATTCAGCCGACCTAAGCAGGC
ATACCGGGGTCCCCAGCGGTTCCAGATGGCTTACAACCATGCTTCTAATG
TTACCAGCGGGTTGATGAATGGAAGGAACGGTCAGCGCAATGACTTCCAT
GACACCGGCTCAGTGGTTGGTTACATCCCCGATGATGTCTCTTCCGTCCA
CTCCTCTGCCCTGGGCGGGGTTGGCATTCCCTCTGGTTATCCTCCCATGT
TCCAGAATTTCGCGGACGCGTGGCCCGCTCTTCCCGGAGCCCGTCGGGCC
AATGGTAACCGTATGAAGGGAGCACCTAGCATTGCCGGAGAATCTGTGGC
AGCCACCGAGTCCGATGTTACTGGAAGCATCATTGATGGGAAGAGCGTCG
ACCAAGGTGGTGTCAGCCTTGCTGGCTTGAGCATCAACGATATGGGCAAG
CAGCCCAGTCTCAGTCAGTCCGATCGGCTGAAGCGCTACGTGGAATCCGG
AGGCCGGGAGCCTTACAAGCCCGGTGTTCCCGATAACGGCAGCATTTTTG
GCGGAAGCTCTGCTAGCATTCGTGTCACTCGTGGTGTGCCAGGCCACATT
CACGATGACGATGATACGCGCAGTGTTTCGACTGCATTCGCCAGTCAGGT
TGGGGGCAACTATGATGGCGGCACTTGGCGATGATAGGATTCCGCCGGAG
ATGGACGACGCAGCTTCCCAGTTCCGCCCGCGGAGACATGACGATGACGA
TGATGCTTCCGGAGACGACGATGTAGAGAGCACAACTAGTGCTCAGGCAG
CCGACAACAAGAATCATCAGGGGCATTTTGAGGAGGAGAAAGAACTCCCG
CCACATGCATGCGCGTATTGCGGCATTCATAACCCGAGCAGCGTAGTCAA
GTGCCTGGCCTGCAGCAAGTGGTTCTGCAGCGCCCGCGGTAACACCTCGT
CCTCCCATATTGTCAATCACCTCGTTCGGGCCCGCCACAAGGAAGTTCAG
TTGCATCCGGCCTCATCGCTTGGGGATACGATATTGGAATGCTACAATTG
CGGGACTAAGAACGTTTTTCTGCTTGGGTTCATTCCGGCCAAGTCTGACA
CGGTCGTCGTATTGCTATGCCGTCAACCATGCGCCGCTATGCCATCTTCT
AAGGATATGAACTGGGATACCTCCCGCTGGCAACCATTGATTGAAGACCG
TTCGTTCTTGCCATGGCTGGTTGCTGCCCCGTCCGACCAGGAACAGCTCC
GCGCTCGCCACCTCAGTCCGCAGTTGATTGCTAAGCTGGAAGAGATGTGG
AAGGAAAATTCTCAAGCGACATTCTCGGATTTGGAGAAGGCCACGGCTGT
GGACGATGAGCCAGCACCTGTGCTTCTGCGTTATGATGATGCTTTCCAGT
ATCAGAACATTTTTGGGCCTTTGGTCAAGATTGAGGCCGACTATGACCGC
AAGTTGAAGGAATCCCAATCGCAGGATGGACTGATCGTGCGCTGGGACCT
TGGTCTCAACAACAAGCATCTGGCTAGCTTCATTTTGCCTAAGCTCGAAC
TTGGCGATGTTAAATTGGCCGTGGGAGATGAAATGCGCCTCAAGTATACC
GGCGAACTGCGGCCCAAATGGGAAGGAGTTGGATATGTCATTAAAATTCC
GAACAACCAGTCCGATGAAGTGACGATTGAGTTACGCGCAAAGGGTGATC
ATAAGTCTGTGCCTACAGAGTGCACGCACAATTTCACAGTTGACTACGTC
TGGAAGTCTACATCATTTGATCGTATGCAGCTGGCTATGAAAACATTTGC
CGTGGATGAGATGAGTGTGTCTGGTTACATTTTCCATCGCCTTCTCGGAC
ACGAAGTCGCAGCCGCGCCGATGAAGACCCAAATGCCGAAGAAGTTCAGC
GTTCCGGGACTTCCAGAACTCAACGGTAGTCAGATTAACGCTGTGAAGAG
CGTGCTGCAGAGACCTTTGAGTTTGATTCAAGGACCTCCGGGAACGGGAA
AGACTGTCACCTCGGCTACGATCATCTACCATCTTGCGAAGATCAACGGT
GGTCAGGTGTTGGTGTGCGCCCCCTCGAACGTTGCGGTTGACCAACTTTG
TGAGCGTATCCATCGGACAGGTCTGAAGACTGTGCGTGTGACAGCTAAAT
CGCGAGAGGATGTTGAATCGCCGGTTGGCTTCTTGTCCTTGCACGAACAA
GTCCGCATCAACGATACCAACATCGAACTCATTAAGCTCAATCAGCTCAA
GGCCGAGCTTGGAGAGTTGTCCAGTCAAGATGAGAAACGACTGAAACAGC
TGACCCGCTCGGCGGAGCGCGAGATCTTGAATAACGCCGACGTAATCTGC
TGTACTTGCGTTGGTGCTGGTGATCCTCGTCTGGCGAAGCTCAAGTTCCG
TACCGTCCTGATTGACGAATCGACCCAGTCGGCTGAGCCAGAATGTATGA
TTCCCTTGGTTCTCGGATGCAAGCAAGTAGTCCTTGTCGGCGATCACCAA
CAGCTGGGACCTGTCATCATGAACAAGAAGGCAGCTAAGGCTGGTCTTAA
CCAGTCACTTTTCGAACGTCTCGTCATTCTTGGCTGCTCCCCTATTCGTC
TTAACGTTCAGTACCGTATGCACCCGTGCCTGTCGGAGTTCCCGTCGAAC
ATGTTCTATGAAGGTTCTCTACAGAACGGTATCTCTTCGTTTGAGCGTCT
CCGCCGTGACGTCGACTTCCCCTGGCCCATTGCCGATAACCCTATGATGT
TCTGGTCGAACCTGGGTAACGAGGAGATTTCGGCCTCCGGAACCTCTTAC
CTTAACCGCACTGAAGCGACGAACGTGGAGAAAATTGTCACCCGCTTCTT
CAAAGCTGGAGTGCAGCCCCAGGACATTGGTATTATCACTCCTTATGAGG
GTCAGCGCAGCTACATTGTTAGCTCTATGCAAGCTAATGGCACCTTCAAG
AAAGAGCATTACAAGGAGATCGAGGTGGCTTCGGTCGATGCCTTCCAGGG
TCGTGAGAAGGACTTCATCATCCTTTCTTGTGTGCGTTCCAACGACCACC
AGGGTATTGGTTTCTTAAGTGATCCTCGCCGTCTCAACGTCGCTCTCACT
CGTGCCAAGTATGGTCTGGCCATCCTTGGAAACCCGAAGGTCTTGTCGAA
GCATCCTTTGTGGAACTGTCTCCTGCAGCATTTCAAGGAAAGGCACTGCC
TGGTTGAGGGACCCTTGTCTAACCTGCAAGAGTCTTTGATCCAATTCAGC
CGACCTAAGCAGGCATACCGGGGTCCCCAGCGGTTCCAGATGGCTTACAA
CCATGCTTCTAATGTTACCAGCGGGTTGATGAATGGAAGGAACGGTCAGC
GCAATGACTTCCATGACACCGGCTCAGTGGTTGGTTACATCCCCGATGAT
GTCTCTTCCGTCCACTCCTCTGCCCTGGGCGGGGTTGGCATTCCCTCTGG
TTATCCTCCCATGTTCCAGAATTTCGCGGACGCGTGGCCCGCTCTTCCCG
GAGCCCGTCGGGCCAATGGTAACCGTATGAAGGGAGCACCTAGCATTGCC
GGAGAATCTGTGGCAGCCACCGAGTCCGATGTTACTGGAAGCATCATTGA
TGGGAAGAGCGTCGACCAAGGTGGTGTCAGCCTTGCTGGCTTGAGCATCA
ACGATATGGGCAAGCAGCCCAGTCTCAGTCAGTCCGATCGGCTGAAGCGC
TACGTGGAATCCGGAGGCCGGGAGCCTTACAAGCCCGGTGTTCCCGATAA
CGGCAGCATTTTTGGCGGAAGCTCTGCTAGCATTCGTGTCACTCGTGGTG
TGCCAGGCCACATTCACGATGACGATGATACGCGCAGTGTTTCGACTGCA
TTCGCCAGTCAGGTTGGGGGCAACTATGATGGCGGCACTTGGCGATGATA
GGATTCCGCCGGAGATGGACGACGCAGCTTCCCAGTTCCGCCCGCGGAGA
CATGACGATGACGATGATGCTTCCGGAGACGACGATGTAGAGAGCACAAC
TAGTGCTCAGGCAGCCGACAACAAGAATCATCAGGGGCATTTTGAGGAGG
AGAAAGAACTCCCGCCACATGCATGCGC back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005737 | cytoplasm |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005524 | ATP binding |
| GO:0003677 | DNA binding |
| GO:0004386 | helicase activity |
| GO:0008270 | zinc ion binding |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0000184 | nuclear-transcribed mRNA catabolic process, nonsense-mediated decay |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR027417 |
| DBxref | InterPro:IPR040812 |
| DBxref | InterPro:IPR041679 |
| DBxref | InterPro:IPR018999 |
| DBxref | InterPro:IPR041677 |
| DBxref | InterPro:IPR014001 |
| DBxref | PFAM:PF09416 |
| DBxref | PFAM:PF04851 |
| DBxref | PFAM:PF18141 |
| DBxref | PFAM:PF13604 |
| DBxref | PFAM:PF13245 |
| DBxref | PFAM:PF13087 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ACJE01000021.1 | supercontig | ACJE01000021.1:1431348..1434622 - |
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