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Sequences
The following sequences are available for this feature:
mRNA from alignment at ACJE01000020.1:448693..451209- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >ASPNIDRAFT_120052-T1 ID=ASPNIDRAFT_120052-T1|Name=ASPNIDRAFT_120052-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=2517bp|location=Sequence derived from alignment at ACJE01000020.1:448693..451209- (Aspergillus niger ATCC 1015)
CATGGTAAAGGTCGTTTGGATAAGTGGTATCGCCTGGCGAAGGAGAAGGG
ATACAGAGCGAGAGCTGCTTTCAAGCTGATCCAGCTGAACAAGAAGTATG
GCTTTCTGGAGAAGAGCAAAGTCGTTCTCGATCTTTGCGCGGCACCCGGT
GTGAGTACAACCCCTCAGTTTGATTTCTAACGCCTGGTCTGGTGGCTGAC
CATTCTCGCAACACAGTCGTGGTGTCAAGTTGCTGCAGAATGCATGCCCG
CACAGAGTATCATCGTCGGTGTCGATCTTGCGCCTATTAAGCCGATTCCC
CGAGTCATTACCTTCCAGAGCGATATCACGACCGAGAAGTGTCGCACAAC
AATCAGACAGCACCTGAAGCACTGGAAGGCTGATACCGTTCTTCACGATG
GTGCCCCCAATGTCGGTACCGCATGGGTTCAGGATGCTTTCTCTCAGGCA
GAGCTGGTGTTGCAGTCTTTGAAGTTGGCTACGGAGTTCTTGGCGGAAGG
CGGTACATTCGTTACGAAGGTCTTCAGATCCAAGGACTACAATCCGCTTT
TGTGGGTTTTCAAGCAACTTTTTGCATCCGTGGAGGCAACGAAACCCCCG
TCTTCTCGAAATGTTTCCGCAGAAATCTTCGTTGTTTGTCGGAATTACAA
GGCACCAAAGCGCATTGATCCGAAGTTCCTCGATCCTAAGCACGTCTTCG
CAGAACTTGCGGACCCTACCCCCAACAATGAGGCTAAGGTGTTCAACCCG
GAGAAGAAGAAGCGCAAGAGAGAGGGTTACGAAGAGGGCGATTATACGCA
ATTCAAGGAGATCCCAGTTACCGAGTTCATCAACACCACTGATCCGATTG
CCATCCTGGGTTCATACAACAAACTCAGTTTTCAACAGTCACCAAGTGGC
GACCTTGCTCTCGCCACACTGGAGAGACTGGAAGATACGACCGACGAGAT
CAAAGCCTGCTGTGAGGATCTCAAGGTTCTGGGTAAGAAGGAGTTCCGAA
ACCTGCTCAGGTGGCGACTGAAAGTGCGGGAGAAGTTTGGTCTCGCTGTG
AAGAAGGGGGCCCAAACCAAGGAGGATGAGACTGAAGAAGTGGCGGAGGT
CGCTCCCATGGATGATGAGCTGGCCATTCAAGAGGAGTTGATGCGCCTTC
GTGAGAAGGAAACCTCAAAGCAAAAGAAAGAGCGCCGCAAGGAGAACGAG
AGGAAGCGCAAGGAAATCGTCCGGTTACAGATGCACATGACGACCCCCAT
GGATATCGGAAAGGAGCAACTGGGACCTAATGGCGAGGATGCTACATTCT
CGCTCAAGCGCGCCGAGAGAGGCGGAGTTAGGGACACCATTGCCGCCGGC
CATGAAGCGTCGATTGAAAGTGATAGCGAGGACAGTGCTTCCGAGTCTGA
GACCGAGGAGAGCGATGACGAGGAAGACCGTCTGGAGCGGGAACTTGACA
ACCTGTACGAGCAATACCAGGACCGCAAGGAAGACCGGGACACGAAGTTA
CGGGCAAAGAAGGCCAGGAAGGACTTCGAAGCCGACTCCTGGGACGGCTT
TTCCGATTCTGACAAGGAAGAAGGTGAAGACTCCGATGATGAGGGTCTTG
GAGTTAGCTCTGCCGTCGACAAAGCTCCCAAGTCAGCTTCCCTTTCCAAC
AGTGCCTCGCTATTCTTCGACCAAGATATATTCCAAGGCCTAGAAGACAT
TGACGATGTGGAGGACGAAGATGAGGAAGTGGAGGATGAAGATAGCGCCA
TCGAAGTTAAGGAGGATCGGCCTAAGGGCAAGGAGTCTGAAAAGAAAAAG
GCAAAGGAATCGAAGAAACCTGTGCAGGCGATGGAAGACTCGGACGAAGA
AGATCTTGAAGAGCTTGAGGATCCACGGAAAAAGAATGGACAGCTCGGTA
AGTTCGCAGAATGCGGCATATCATTGCATTGTACCCTGGATAACTAATGC
TGACTCTACTATGTAGATATCGATATCATCACTGCGGAAGCCATGGCACT
CGCTCAGCAGATGGCCACTGGAGAGAAGAAGTCTCATGATGTGGTTGATG
ATGGCTTTAACCGATTTGCTTTCCGTGATAGTGATGGTCTCCCCGAGTGG
TTCCTTGACGACGAGAACAAGCACAGTGTCCAGAACCGTCCTATCACCAA
GGCGGCCGCAGCCGCAATCAAGGAGAAGATGCGCGCCATCAACGCTCGGC
CCATCAAGAAGGTTATGGAAGCCAAGGGCCGCAAGAAGATGAAGGCCGCC
CAGCGACTGGAGAAACTGCGCAAGAAGTCTGCACTTTTGGCAGATGACGA
AGCTCTCAGCGAGCGTGATAAGTCGCAGGCCATTGCGAGGTTGATGAGCA
GGGCTACCAAGAAGAAGCCCAAGCAGCAGGTGAAGTTGGTGGTTGCCAAG
GGAAACAACAGGGGTATTTCTGGACGTCCTCGTGGTGTCAAGGGCAAGTA
CAAGATTGTGGATTCTCGTATGAAGAAGGATATCCGGGCTCAGAAGCGCC
TTGCCAAGAAGAAGAAG back to topCoding sequence (CDS) from alignment at ACJE01000020.1:448693..451209- >ASPNIDRAFT_120052-T1 ID=ASPNIDRAFT_120052-T1|Name=ASPNIDRAFT_120052-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=7146bp|location=Sequence derived from alignment at ACJE01000020.1:448693..451209- (Aspergillus niger ATCC 1015)
ATATCGATATCATCACTGCGGAAGCCATGGCACTCGCTCAGCAGATGGCC
ACTGGAGAGAAGAAGTCTCATGATGTGGTTGATGATGGCTTTAACCGATT
TGCTTTCCGTGATAGTGATGGTCTCCCCGAGTGGTTCCTTGACGACGAGA
ACAAGCACAGTGTCCAGAACCGTCCTATCACCAAGGCGGCCGCAGCCGCA
ATCAAGGAGAAGATGCGCGCCATCAACGCTCGGCCCATCAAGAAGGTTAT
GGAAGCCAAGGGCCGCAAGAAGATGAAGGCCGCCCAGCGACTGGAGAAAC
TGCGCAAGAAGTCTGCACTTTTGGCAGATGACGAAGCTCTCAGCGAGCGT
GATAAGTCGCAGGCCATTGCGAGGTTGATGAGCAGGGCTACCAAGAAGAA
GCCCAAGCAGCAGGTGAAGTTGGTGGTTGCCAAGGGAAACAACAGGGGTA
TTTCTGGACGTCCTCGTGGTGTCAAGGGCAAGTACAAGATTGTGGATTCT
CGTATGAAGAAGGATATCCGGGCTCAGAAGCGCCTTGCCAAGAAGAAGAA
GTCGTGGTGTCAAGTTGCTGCAGAATGCATGCCCGCACAGAGTATCATCG
TCGGTGTCGATCTTGCGCCTATTAAGCCGATTCCCCGAGTCATTACCTTC
CAGAGCGATATCACGACCGAGAAGTGTCGCACAACAATCAGACAGCACCT
GAAGCACTGGAAGGCTGATACCGTTCTTCACGATGGTGCCCCCAATGTCG
GTACCGCATGGGTTCAGGATGCTTTCTCTCAGGCAGAGCTGGTGTTGCAG
TCTTTGAAGTTGGCTACGGAGTTCTTGGCGGAAGGCGGTACATTCGTTAC
GAAGGTCTTCAGATCCAAGGACTACAATCCGCTTTTGTGGGTTTTCAAGC
AACTTTTTGCATCCGTGGAGGCAACGAAACCCCCGTCTTCTCGAAATGTT
TCCGCAGAAATCTTCGTTGTTTGTCGGAATTACAAGGCACCAAAGCGCAT
TGATCCGAAGTTCCTCGATCCTAAGCACGTCTTCGCAGAACTTGCGGACC
CTACCCCCAACAATGAGGCTAAGGTGTTCAACCCGGAGAAGAAGAAGCGC
AAGAGAGAGGGTTACGAAGAGGGCGATTATACGCAATTCAAGGAGATCCC
AGTTACCGAGTTCATCAACACCACTGATCCGATTGCCATCCTGGGTTCAT
ACAACAAACTCAGTTTTCAACAGTCACCAAGTGGCGACCTTGCTCTCGCC
ACACTGGAGAGACTGGAAGATACGACCGACGAGATCAAAGCCTGCTGTGA
GGATCTCAAGGTTCTGGGTAAGAAGGAGTTCCGAAACCTGCTCAGGTGGC
GACTGAAAGTGCGGGAGAAGTTTGGTCTCGCTGTGAAGAAGGGGGCCCAA
ACCAAGGAGGATGAGACTGAAGAAGTGGCGGAGGTCGCTCCCATGGATGA
TGAGCTGGCCATTCAAGAGGAGTTGATGCGCCTTCGTGAGAAGGAAACCT
CAAAGCAAAAGAAAGAGCGCCGCAAGGAGAACGAGAGGAAGCGCAAGGAA
ATCGTCCGGTTACAGATGCACATGACGACCCCCATGGATATCGGAAAGGA
GCAACTGGGACCTAATGGCGAGGATGCTACATTCTCGCTCAAGCGCGCCG
AGAGAGGCGGAGTTAGGGACACCATTGCCGCCGGCCATGAAGCGTCGATT
GAAAGTGATAGCGAGGACAGTGCTTCCGAGTCTGAGACCGAGGAGAGCGA
TGACGAGGAAGACCGTCTGGAGCGGGAACTTGACAACCTGTACGAGCAAT
ACCAGGACCGCAAGGAAGACCGGGACACGAAGTTACGGGCAAAGAAGGCC
AGGAAGGACTTCGAAGCCGACTCCTGGGACGGCTTTTCCGATTCTGACAA
GGAAGAAGGTGAAGACTCCGATGATGAGGGTCTTGGAGTTAGCTCTGCCG
TCGACAAAGCTCCCAAGTCAGCTTCCCTTTCCAACAGTGCCTCGCTATTC
TTCGACCAAGATATATTCCAAGGCCTAGAAGACATTGACGATGTGGAGGA
CGAAGATGAGGAAGTGGAGGATGAAGATAGCGCCATCGAAGTTAAGGAGG
ATCGGCCTAAGGGCAAGGAGTCTGAAAAGAAAAAGGCAAAGGAATCGAAG
AAACCTGTGCAGGCGATGGAAGACTCGGACGAAGAAGATCTTGAAGAGCT
TGAGGATCCACGGAAAAAGAATGGACAGCTCGCATGGTAAAGGTCGTTTG
GATAAGTGGTATCGCCTGGCGAAGGAGAAGGGATACAGAGCGAGAGCTGC
TTTCAAGCTGATCCAGCTGAACAAGAAGTATGGCTTTCTGGAGAAGAGCA
AAGTCGTTCTCGATCTTTGCGCGGCACCCGGTATATCGATATCATCACTG
CGGAAGCCATGGCACTCGCTCAGCAGATGGCCACTGGAGAGAAGAAGTCT
CATGATGTGGTTGATGATGGCTTTAACCGATTTGCTTTCCGTGATAGTGA
TGGTCTCCCCGAGTGGTTCCTTGACGACGAGAACAAGCACAGTGTCCAGA
ACCGTCCTATCACCAAGGCGGCCGCAGCCGCAATCAAGGAGAAGATGCGC
GCCATCAACGCTCGGCCCATCAAGAAGGTTATGGAAGCCAAGGGCCGCAA
GAAGATGAAGGCCGCCCAGCGACTGGAGAAACTGCGCAAGAAGTCTGCAC
TTTTGGCAGATGACGAAGCTCTCAGCGAGCGTGATAAGTCGCAGGCCATT
GCGAGGTTGATGAGCAGGGCTACCAAGAAGAAGCCCAAGCAGCAGGTGAA
GTTGGTGGTTGCCAAGGGAAACAACAGGGGTATTTCTGGACGTCCTCGTG
GTGTCAAGGGCAAGTACAAGATTGTGGATTCTCGTATGAAGAAGGATATC
CGGGCTCAGAAGCGCCTTGCCAAGAAGAAGAAGTCGTGGTGTCAAGTTGC
TGCAGAATGCATGCCCGCACAGAGTATCATCGTCGGTGTCGATCTTGCGC
CTATTAAGCCGATTCCCCGAGTCATTACCTTCCAGAGCGATATCACGACC
GAGAAGTGTCGCACAACAATCAGACAGCACCTGAAGCACTGGAAGGCTGA
TACCGTTCTTCACGATGGTGCCCCCAATGTCGGTACCGCATGGGTTCAGG
ATGCTTTCTCTCAGGCAGAGCTGGTGTTGCAGTCTTTGAAGTTGGCTACG
GAGTTCTTGGCGGAAGGCGGTACATTCGTTACGAAGGTCTTCAGATCCAA
GGACTACAATCCGCTTTTGTGGGTTTTCAAGCAACTTTTTGCATCCGTGG
AGGCAACGAAACCCCCGTCTTCTCGAAATGTTTCCGCAGAAATCTTCGTT
GTTTGTCGGAATTACAAGGCACCAAAGCGCATTGATCCGAAGTTCCTCGA
TCCTAAGCACGTCTTCGCAGAACTTGCGGACCCTACCCCCAACAATGAGG
CTAAGGTGTTCAACCCGGAGAAGAAGAAGCGCAAGAGAGAGGGTTACGAA
GAGGGCGATTATACGCAATTCAAGGAGATCCCAGTTACCGAGTTCATCAA
CACCACTGATCCGATTGCCATCCTGGGTTCATACAACAAACTCAGTTTTC
AACAGTCACCAAGTGGCGACCTTGCTCTCGCCACACTGGAGAGACTGGAA
GATACGACCGACGAGATCAAAGCCTGCTGTGAGGATCTCAAGGTTCTGGG
TAAGAAGGAGTTCCGAAACCTGCTCAGGTGGCGACTGAAAGTGCGGGAGA
AGTTTGGTCTCGCTGTGAAGAAGGGGGCCCAAACCAAGGAGGATGAGACT
GAAGAAGTGGCGGAGGTCGCTCCCATGGATGATGAGCTGGCCATTCAAGA
GGAGTTGATGCGCCTTCGTGAGAAGGAAACCTCAAAGCAAAAGAAAGAGC
GCCGCAAGGAGAACGAGAGGAAGCGCAAGGAAATCGTCCGGTTACAGATG
CACATGACGACCCCCATGGATATCGGAAAGGAGCAACTGGGACCTAATGG
CGAGGATGCTACATTCTCGCTCAAGCGCGCCGAGAGAGGCGGAGTTAGGG
ACACCATTGCCGCCGGCCATGAAGCGTCGATTGAAAGTGATAGCGAGGAC
AGTGCTTCCGAGTCTGAGACCGAGGAGAGCGATGACGAGGAAGACCGTCT
GGAGCGGGAACTTGACAACCTGTACGAGCAATACCAGGACCGCAAGGAAG
ACCGGGACACGAAGTTACGGGCAAAGAAGGCCAGGAAGGACTTCGAAGCC
GACTCCTGGGACGGCTTTTCCGATTCTGACAAGGAAGAAGGTGAAGACTC
CGATGATGAGGGTCTTGGAGTTAGCTCTGCCGTCGACAAAGCTCCCAAGT
CAGCTTCCCTTTCCAACAGTGCCTCGCTATTCTTCGACCAAGATATATTC
CAAGGCCTAGAAGACATTGACGATGTGGAGGACGAAGATGAGGAAGTGGA
GGATGAAGATAGCGCCATCGAAGTTAAGGAGGATCGGCCTAAGGGCAAGG
AGTCTGAAAAGAAAAAGGCAAAGGAATCGAAGAAACCTGTGCAGGCGATG
GAAGACTCGGACGAAGAAGATCTTGAAGAGCTTGAGGATCCACGGAAAAA
GAATGGACAGCTCGCATGGTAAAGGTCGTTTGGATAAGTGGTATCGCCTG
GCGAAGGAGAAGGGATACAGAGCGAGAGCTGCTTTCAAGCTGATCCAGCT
GAACAAGAAGTATGGCTTTCTGGAGAAGAGCAAAGTCGTTCTCGATCTTT
GCGCGGCACCCGGTATATCGATATCATCACTGCGGAAGCCATGGCACTCG
CTCAGCAGATGGCCACTGGAGAGAAGAAGTCTCATGATGTGGTTGATGAT
GGCTTTAACCGATTTGCTTTCCGTGATAGTGATGGTCTCCCCGAGTGGTT
CCTTGACGACGAGAACAAGCACAGTGTCCAGAACCGTCCTATCACCAAGG
CGGCCGCAGCCGCAATCAAGGAGAAGATGCGCGCCATCAACGCTCGGCCC
ATCAAGAAGGTTATGGAAGCCAAGGGCCGCAAGAAGATGAAGGCCGCCCA
GCGACTGGAGAAACTGCGCAAGAAGTCTGCACTTTTGGCAGATGACGAAG
CTCTCAGCGAGCGTGATAAGTCGCAGGCCATTGCGAGGTTGATGAGCAGG
GCTACCAAGAAGAAGCCCAAGCAGCAGGTGAAGTTGGTGGTTGCCAAGGG
AAACAACAGGGGTATTTCTGGACGTCCTCGTGGTGTCAAGGGCAAGTACA
AGATTGTGGATTCTCGTATGAAGAAGGATATCCGGGCTCAGAAGCGCCTT
GCCAAGAAGAAGAAGTCGTGGTGTCAAGTTGCTGCAGAATGCATGCCCGC
ACAGAGTATCATCGTCGGTGTCGATCTTGCGCCTATTAAGCCGATTCCCC
GAGTCATTACCTTCCAGAGCGATATCACGACCGAGAAGTGTCGCACAACA
ATCAGACAGCACCTGAAGCACTGGAAGGCTGATACCGTTCTTCACGATGG
TGCCCCCAATGTCGGTACCGCATGGGTTCAGGATGCTTTCTCTCAGGCAG
AGCTGGTGTTGCAGTCTTTGAAGTTGGCTACGGAGTTCTTGGCGGAAGGC
GGTACATTCGTTACGAAGGTCTTCAGATCCAAGGACTACAATCCGCTTTT
GTGGGTTTTCAAGCAACTTTTTGCATCCGTGGAGGCAACGAAACCCCCGT
CTTCTCGAAATGTTTCCGCAGAAATCTTCGTTGTTTGTCGGAATTACAAG
GCACCAAAGCGCATTGATCCGAAGTTCCTCGATCCTAAGCACGTCTTCGC
AGAACTTGCGGACCCTACCCCCAACAATGAGGCTAAGGTGTTCAACCCGG
AGAAGAAGAAGCGCAAGAGAGAGGGTTACGAAGAGGGCGATTATACGCAA
TTCAAGGAGATCCCAGTTACCGAGTTCATCAACACCACTGATCCGATTGC
CATCCTGGGTTCATACAACAAACTCAGTTTTCAACAGTCACCAAGTGGCG
ACCTTGCTCTCGCCACACTGGAGAGACTGGAAGATACGACCGACGAGATC
AAAGCCTGCTGTGAGGATCTCAAGGTTCTGGGTAAGAAGGAGTTCCGAAA
CCTGCTCAGGTGGCGACTGAAAGTGCGGGAGAAGTTTGGTCTCGCTGTGA
AGAAGGGGGCCCAAACCAAGGAGGATGAGACTGAAGAAGTGGCGGAGGTC
GCTCCCATGGATGATGAGCTGGCCATTCAAGAGGAGTTGATGCGCCTTCG
TGAGAAGGAAACCTCAAAGCAAAAGAAAGAGCGCCGCAAGGAGAACGAGA
GGAAGCGCAAGGAAATCGTCCGGTTACAGATGCACATGACGACCCCCATG
GATATCGGAAAGGAGCAACTGGGACCTAATGGCGAGGATGCTACATTCTC
GCTCAAGCGCGCCGAGAGAGGCGGAGTTAGGGACACCATTGCCGCCGGCC
ATGAAGCGTCGATTGAAAGTGATAGCGAGGACAGTGCTTCCGAGTCTGAG
ACCGAGGAGAGCGATGACGAGGAAGACCGTCTGGAGCGGGAACTTGACAA
CCTGTACGAGCAATACCAGGACCGCAAGGAAGACCGGGACACGAAGTTAC
GGGCAAAGAAGGCCAGGAAGGACTTCGAAGCCGACTCCTGGGACGGCTTT
TCCGATTCTGACAAGGAAGAAGGTGAAGACTCCGATGATGAGGGTCTTGG
AGTTAGCTCTGCCGTCGACAAAGCTCCCAAGTCAGCTTCCCTTTCCAACA
GTGCCTCGCTATTCTTCGACCAAGATATATTCCAAGGCCTAGAAGACATT
GACGATGTGGAGGACGAAGATGAGGAAGTGGAGGATGAAGATAGCGCCAT
CGAAGTTAAGGAGGATCGGCCTAAGGGCAAGGAGTCTGAAAAGAAAAAGG
CAAAGGAATCGAAGAAACCTGTGCAGGCGATGGAAGACTCGGACGAAGAA
GATCTTGAAGAGCTTGAGGATCCACGGAAAAAGAATGGACAGCTCGCATG
GTAAAGGTCGTTTGGATAAGTGGTATCGCCTGGCGAAGGAGAAGGGATAC
AGAGCGAGAGCTGCTTTCAAGCTGATCCAGCTGAACAAGAAGTATGGCTT
TCTGGAGAAGAGCAAAGTCGTTCTCGATCTTTGCGCGGCACCCGGT back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005634 | nucleus |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0008649 | rRNA methyltransferase activity |
| GO:0008168 | methyltransferase activity |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0001510 | RNA methylation |
| GO:0031167 | rRNA methylation |
| GO:0032259 | methylation |
| GO:0006364 | rRNA processing |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG09260V5Q |
| DBxref | InterPro:IPR029063 |
| DBxref | InterPro:IPR015507 |
| DBxref | InterPro:IPR028589 |
| DBxref | InterPro:IPR024576 |
| DBxref | InterPro:IPR002877 |
| DBxref | InterPro:IPR012920 |
| DBxref | PFAM:PF07780 |
| DBxref | PFAM:PF01728 |
| DBxref | PFAM:PF11861 |
| Product | AdoMet-dependent rRNA methyltransferase spb1 |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ACJE01000020.1 | supercontig | ACJE01000020.1:448693..451209 - |
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