|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at ACJE01000016.1:1575211..1577342+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >ASPNIDRAFT_120567-T1 ID=ASPNIDRAFT_120567-T1|Name=ASPNIDRAFT_120567-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=2132bp|location=Sequence derived from alignment at ACJE01000016.1:1575211..1577342+ (Aspergillus niger ATCC 1015) GCCGCACGAAGCCTCAATGGTTGCTGGACATGCCGTGTCCGCCGGAAGAA
ATGCGATGAGACTCGCCCGGCATGCACCCGATGCATCTCCTTGGACCTCG
AGTGCCACGGATACGGTCCGCGGCCGTATTGGATGGACAATGGGACCCTG
CAAAATGAGCAAGCCTCGAAGTTCCGGCAGATGGTTAGTCAGGCCCGGTC
AAGAAAGAGAAGACAGAAACTTCTCCTTTCTACTCGCCCATCAGCCCGCA
ATACCGGTAAGGGTCTCCATCTACAGATGTCAAGCAAAGGACCCGCACTA
AGATCGATTACTCCAGTCTACCCTTTCTTCAATGTAGCCCCAGACGAACT
GCACGGTCTAACCCGAGACAGCAATGTGGCTGCTATTAATAATAGTACGC
TGGTGTACAGCACCGTGCCTCTCCACCAGCTCCCCACCCCTGAAGGCACC
TCGGTCTTCCCTGAGGAAGACTATACCACGTTCTCGAAGCAGCTAGAGTG
GGCGCACAACCCTTCGTCTCCCTCATCGTCAGTAGAAGGGCTCCTAACCC
CAAACGTGCTGGAAACGCAAGAGCCCGGAATTACATGGGGTGACATGATG
AACTCGGACGATTTTGGCTTGGCCATGAGTAAATCCTCCCTGTCGGACTT
GGATGACTTGATGTGGAGCGCATCCCTGGATAGCCCCCACCTGCAGAAAG
AACCTACTTTGTCTCCTGACCCGACAAGCCTGCAACCGACGTCCGGCATG
CATATGCCGGCAGCTGCAACCTGCGGACAGACCATCTCGTGGCCCGGGAC
ACCCCTTGACCCCATCCCGGGAAGCAGATCCGAGGATGAGTTACTGATGC
ACTACTTGGACCGGGTCTTCTACATTCAGTATCCATTTTACCACACCCAA
GACCGACAAGGGAGAGGTTGGCTTCTCTCACTTCTGCGGCGCATCAAACC
CGCATACTATGCGAGTCTGGCTCTCAGCGAGCTCGACTTGCTCTCGACAT
CGCTTCCTAAAAGTGAGCTCCCGGCACGACTGGCGCAATTACGTACCAAA
GATGGCTATCACGACCTGGCTCTTCAGGGAATGCAGCGCATCATGGCCGA
CTCGTTTAGCTGGAATGCACAGAGCCAAATTACGCACAGTCTTGAGGGAC
TTGTTTCAATACTTCAACTTCTGTATTGGGAGGTAGGTGGCTCAACCTGA
TGATACAGTGCGATTGAACGTACTGACTTCTTCAGATATTTGCTGGCGGA
ACTAAGAACTGGCAATGGCTTCTTCGGCTAGCTGGCAATCTGATGCCTGT
GTTCATGCAGGTGCGGATGTCTTCTACACCTCATGAGACATCGAGTCAGA
TCTGCCCAAGTATACCGCTAGACAAGCAGAGCCCGTCCCCCGAAGACGAC
TCTACTGCGAGACTCCTCCTTGGTTCTCTCGTGTCGTTGGATATTATCGC
TTCTGCTTCTACCCGGCGGGTTCCCTTTCTGGATATTGATCATGTCCAGG
TACTGGGCCGCTTCGGGATTTCTCTAGAAAGTCTAATAGGGTGTCGGAAC
TCAATCATGGCCCTGATCGCGGATGTTTCTGCGCTGGATCAATGGAAGAA
AGAGTCTGAGGCGGCTCGTAAGCTCAGCATCATTGAATTAGCACAGCGTG
GTGGGCAATTAGAGCAGCGCCTACGACGAGAACTCGCCGATCTCGAGCAG
ATGTCCGCTTCAGAGCCATTTGCAGCATGGGGCTCTTCCGCTACCCCGGG
CGTTTCTCGGCCTCACCCAGGAATTAACAAGGCGTTTGGGCTCGGAGCCA
TCGCCTATCTCCATGTTGTGCTCTCCGGGGCTCATCCTGAGCTGCCGGAG
ATTGCACAAACTGTTTCCGAGGCCATTCTTGTGTTCCAGGTGCTTCGGGA
TCAGCGACTCCTGTCGAGTGTGGTGTGGCCTTTTTGCATCGTGGGCTGTT
TAGCGCAGCCCGAACAACAGCCTTCTTTCCGGGAGCTCTTCACGACGGCG
GAGGCCACGGAGGGAACACTGGCAGAGGCATATCGAGTGATGGAGGAATG
TTGGAAGGCTAGGAAAAGTCGCACATTGGATTGCGACTGGGTTTCAGTGA
TGAATGAGCGGGGGGATTATGTGTTGCTTCGA back to topCoding sequence (CDS) from alignment at ACJE01000016.1:1575211..1577342+ >ASPNIDRAFT_120567-T1 ID=ASPNIDRAFT_120567-T1|Name=ASPNIDRAFT_120567-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=4156bp|location=Sequence derived from alignment at ACJE01000016.1:1575211..1577342+ (Aspergillus niger ATCC 1015) GCCGCACGAAGCCTCAATGGTTGCTGGACATGCCGTGTCCGCCGGAAGAA ATGCGATGAGACTCGCCCGGCATGCACCCGATGCATCTCCTTGGACCTCG AGTGCCACGGATACGGTCCGCGGCCGTATTGGATGGACAATGGGACCCTG CAAAATGAGCAAGCCTCGAAGTTCCGGCAGATGGTTAGTCAGGCCCGGTC AAGAAAGAGAAGACAGAAACTTCTCCTTTCTACTCGCCCATCAGCCCGCA ATACCGGTAAGGGTCTCCATCTACAGATGTCAAGCAAAGGACCCGCACTA AGATCGATTACTCCAGTCTACCCTTTCTTCAATGTAGCCCCAGACGAACT GCACGGTCTAACCCGAGACAGCAATGTGGCTGCTATTAATAATAGTACGC TGGTGTACAGCACCGTGCCTCTCCACCAGCTCCCCACCCCTGAAGGCACC TCGGTCTTCCCTGAGGAAGACTATACCACGTTCTCGAAGCAGCTAGAGTG GGCGCACAACCCTTCGTCTCCCTCATCGTCAGTAGAAGGGCTCCTAACCC CAAACGTGCTGGAAACGCAAGAGCCCGGAATTACATGGGGTGACATGATG AACTCGGACGATTTTGGCTTGGCCATGAGTAAATCCTCCCTGTCGGACTT GGATGACTTGATGTGGAGCGCATCCCTGGATAGCCCCCACCTGCAGAAAG AACCTACTTTGTCTCCTGACCCGACAAGCCTGCAACCGACGTCCGGCATG CATATGCCGGCAGCTGCAACCTGCGGACAGACCATCTCGTGGCCCGGGAC ACCCCTTGACCCCATCCCGGGAAGCAGATCCGAGGATGAGTTACTGATGC ACTACTTGGACCGGGTCTTCTACATTCAGTATCCATTTTACCACACCCAA GACCGACAAGGGAGAGGTTGGCTTCTCTCACTTCTGCGGCGCATCAAACC CGCATACTATGCGAGTCTGGCTCTCAGCGAGCTCGACTTGCTCTCGACAT CGCTTCCTAAAAGTGAGCTCCCGGCACGACTGGCGCAATTACGTACCAAA GATGGCTATCACGACCTGGCTCTTCAGGGAATGCAGCGCATCATGGCCGA CTCGTTTAGCTGGAATGCACAGAGCCAAATTACGCACAGTCTTGAGGGAC TTGTTTCAATACTTCAACTTCTGTATTGGGAGATATTTGCTGGCGGAACT AAGAACTGGCAATGGCTTCTTCGGCTAGCTGGCAATCTGATGCCTGTGTT CATGCAGGTGCGGATGTCTTCTACACCTCATGAGACATCGAGTCAGATCT GCCCAAGTATACCGCTAGACAAGCAGAGCCCGTCCCCCGAAGACGACTCT ACTGCGAGACTCCTCCTTGGTTCTCTCGTGTCGTTGGATATTATCGCTTC TGCTTCTACCCGGCGGGTTCCCTTTCTGGATATTGATCATGTCCAGGTAC TGGGCCGCTTCGGGATTTCTCTAGAAAGTCTAATAGGGTGTCGGAACTCA ATCATGGCCCTGATCGCGGATGTTTCTGCGCTGGATCAATGGAAGAAAGA GTCTGAGGCGGCTCGTAAGCTCAGCATCATTGAATTAGCACAGCGTGGTG GGCAATTAGAGCAGCGCCTACGACGAGAACTCGCCGATCTCGAGCAGATG TCCGCTTCAGAGCCATTTGCAGCATGGGGCTCTTCCGCTACCCCGGGCGT TTCTCGGCCTCACCCAGGAATTAACAAGGCGTTTGGGCTCGGAGCCATCG CCTATCTCCATGTTGTGCTCTCCGGGGCTCATCCTGAGCTGCCGGAGATT GCACAAACTGTTTCCGAGGCCATTCTTGTGTTCCAGGTGCTTCGGGATCA GCGACTCCTGTCGAGTGTGGTGTGGCCTTTTTGCATCGTGGGCTGTTTAG CGCAGCCCGAACAACAGCCTTCTTTCCGGGAGCTCTTCACGACGGCGGAG GCCACGGAGGGAACACTGGCAGAGGCATATCGAGTGATGGAGGAATGTTG GAAGGCTAGGAAAAGTCGCACATTGGATTGCGACTGGGTTTCAGTGATGA ATGAGCGGGGGGATTATGTGTTGCTTCGGCCGCACGAAGCCTCAATGGTT GCTGGACATGCCGTGTCCGCCGGAAGAAATGCGATGAGACTCGCCCGGCA TGCACCCGATGCATCTCCTTGGACCTCGAGTGCCACGGATACGGTCCGCG GCCGTATTGGATGGACAATGGGACCCTGCAAAATGAGCAAGCCTCGAAGT TCCGGCAGATGGTTAGTCAGGCCCGGTCAAGAAAGAGAAGACAGAAACTT CTCCTTTCTACTCGCCCATCAGCCCGCAATACCGGTAAGGGTCTCCATCT ACAGATGTCAAGCAAAGGACCCGCACTAAGATCGATTACTCCAGTCTACC CTTTCTTCAATGTAGCCCCAGACGAACTGCACGGTCTAACCCGAGACAGC AATGTGGCTGCTATTAATAATAGTACGCTGGTGTACAGCACCGTGCCTCT CCACCAGCTCCCCACCCCTGAAGGCACCTCGGTCTTCCCTGAGGAAGACT ATACCACGTTCTCGAAGCAGCTAGAGTGGGCGCACAACCCTTCGTCTCCC TCATCGTCAGTAGAAGGGCTCCTAACCCCAAACGTGCTGGAAACGCAAGA GCCCGGAATTACATGGGGTGACATGATGAACTCGGACGATTTTGGCTTGG CCATGAGTAAATCCTCCCTGTCGGACTTGGATGACTTGATGTGGAGCGCA TCCCTGGATAGCCCCCACCTGCAGAAAGAACCTACTTTGTCTCCTGACCC GACAAGCCTGCAACCGACGTCCGGCATGCATATGCCGGCAGCTGCAACCT GCGGACAGACCATCTCGTGGCCCGGGACACCCCTTGACCCCATCCCGGGA AGCAGATCCGAGGATGAGTTACTGATGCACTACTTGGACCGGGTCTTCTA CATTCAGTATCCATTTTACCACACCCAAGACCGACAAGGGAGAGGTTGGC TTCTCTCACTTCTGCGGCGCATCAAACCCGCATACTATGCGAGTCTGGCT CTCAGCGAGCTCGACTTGCTCTCGACATCGCTTCCTAAAAGTGAGCTCCC GGCACGACTGGCGCAATTACGTACCAAAGATGGCTATCACGACCTGGCTC TTCAGGGAATGCAGCGCATCATGGCCGACTCGTTTAGCTGGAATGCACAG AGCCAAATTACGCACAGTCTTGAGGGACTTGTTTCAATACTTCAACTTCT GTATTGGGAGATATTTGCTGGCGGAACTAAGAACTGGCAATGGCTTCTTC GGCTAGCTGGCAATCTGATGCCTGTGTTCATGCAGGTGCGGATGTCTTCT ACACCTCATGAGACATCGAGTCAGATCTGCCCAAGTATACCGCTAGACAA GCAGAGCCCGTCCCCCGAAGACGACTCTACTGCGAGACTCCTCCTTGGTT CTCTCGTGTCGTTGGATATTATCGCTTCTGCTTCTACCCGGCGGGTTCCC TTTCTGGATATTGATCATGTCCAGGTACTGGGCCGCTTCGGGATTTCTCT AGAAAGTCTAATAGGGTGTCGGAACTCAATCATGGCCCTGATCGCGGATG TTTCTGCGCTGGATCAATGGAAGAAAGAGTCTGAGGCGGCTCGTAAGCTC AGCATCATTGAATTAGCACAGCGTGGTGGGCAATTAGAGCAGCGCCTACG ACGAGAACTCGCCGATCTCGAGCAGATGTCCGCTTCAGAGCCATTTGCAG CATGGGGCTCTTCCGCTACCCCGGGCGTTTCTCGGCCTCACCCAGGAATT AACAAGGCGTTTGGGCTCGGAGCCATCGCCTATCTCCATGTTGTGCTCTC CGGGGCTCATCCTGAGCTGCCGGAGATTGCACAAACTGTTTCCGAGGCCA TTCTTGTGTTCCAGGTGCTTCGGGATCAGCGACTCCTGTCGAGTGTGGTG TGGCCTTTTTGCATCGTGGGCTGTTTAGCGCAGCCCGAACAACAGCCTTC TTTCCGGGAGCTCTTCACGACGGCGGAGGCCACGGAGGGAACACTGGCAG AGGCATATCGAGTGATGGAGGAATGTTGGAAGGCTAGGAAAAGTCGCACA TTGGATTGCGACTGGGTTTCAGTGATGAATGAGCGGGGGGATTATGTGTT GCTTCG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
| GO:0005634 | nucleus |
Vocabulary: Molecular Function
| Term | Definition |
| GO:0008270 | zinc ion binding |
| GO:0000981 | DNA-binding transcription factor activity, RNA polymerase II-specific |
Vocabulary: Biological Process
| Term | Definition |
| GO:0006355 | regulation of transcription, DNA-templated |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
| Note | antiSMASH:Cluster_10000161.6 |
| Note | EggNog:ENOG41 |
| DBxref | InterPro:IPR021858 |
| DBxref | InterPro:IPR036864 |
| DBxref | InterPro:IPR001138 |
| DBxref | PFAM:PF00172 |
| DBxref | PFAM:PF11951 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
| ACJE01000016.1 | supercontig | ACJE01000016.1:1575211..1577342 + |
|