You are here

Home

ASPNIDRAFT_121183-T1, ASPNIDRAFT_121183-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_121183-T1
Unique NameASPNIDRAFT_121183-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000010.1:1443823..1445480+

Legend: exonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_121183-T1 ID=ASPNIDRAFT_121183-T1|Name=ASPNIDRAFT_121183-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=1658bp|location=Sequence derived from alignment at ACJE01000010.1:1443823..1445480+ (Aspergillus niger ATCC 1015)
CTGCCCTGGCTATCTATAGACCAGTCCCTGACCATAGAACTTCCTAGACG
GATTGGGCAAACGTCAAAACGACTTCATCTAGCTAGGAATCATGCGTTGC
CTTCGGTAGACATTCTGCTGCCATGCTGTGGTGAACCAATAGATATTATT
CACGATACCATACGCGCGGCGTGTGTCATTGACTACCCTCAATCTGCATT
CCGGATTCTCGTCCTCGATGATGGAAATTCTCTCGAGCTACGACAGTCGG
TAGAAGAGTTGCGTCATACCTGGCCAAACCTTCTTTACTATAGCAGAGGA
ACTAGACCAAGTCAGAAAGTCTTTGCAAAAGCAGGAAACCTGAACTTTGG
CCTATTTGATATCCAGGGAGGAATGGACAAGCCGCCCGAGTTCATCGCCT
CGTTCGATTCGGACTTTCTGCCTGCTCCCAACTTTCTGCGAGCCACGCTT
CCTCATCTGTTGGGGGATGAGAATGTTGGACTGGTAGCTGCCAGGCAAGA
CTACTATAACCTTCCCCCAGGGGACCCACTTGGTCAAAGCCTGGCAGTTT
ATTGGGAGATATTTTTGCCCAGGATGAACGAAATGGGGACGAGTATAGCA
TCAACTACAGGATGTGTTATGCGCCGCGATCTAGCCGTCAAAGTGGGCGG
ATTCCCGACTATAAACGAAGTGGAGGATATCACTCTATCGATGATTTTGC
CAGCGTATGGGAAGCGCGTCGTAGCCGTCGATGAAATGCTGCAGCTTGGA
CGCGTGCCATCCTCGTTGGAAGGTCATGTCCGGCAGAACCGACGATGGAT
CACTGGCTTGACACAGATGATCGCAACTCCCTGGGCACCATCCAGGCAGT
CTATCCCGATTTCGTCGAGATACTACATGGCATTATTTGGTATTCAGTGG
CTTTGGTCACCTCTGAGTCAGTGTGTCGGTTGTGCAATAATCGCTCCTGC
GTTAATATCACGCCAAGCGCTTGTGCCACCCCATTTACTCCAGGTCCAGA
TCCCATTATCCCTGGTAGCTTTCGGACTCGTTTTCCTGTACGAATGGCTC
AAGGCTGCAGCAACGGGGTTTCGATTGTCTGCATTTGCTCATTTCTATGA
TCTGTGGTTATGTGCAGGTAGGTCTGCCGTCTATCAACCCGATATGGTAG
ATACAACGTACTAACAGCCGCCAAAGACCGACTGTATACTCTCATTCAAT
ATCATATTCTCGGGTCACAGGCCGGTAGGTCCTTGGTGACTGGCAGTGCC
GAGAACAACTGGAACAATCCCACCAAGGTCCCCACGCGAGTGAGACAGTT
GAAAAGGGATCTATGGGATTCCGGGGTCGGCTTCAACGTCCTTTTCGTGT
TTGGTGTCCTCGCGGGAATCTTCCATTCGGTACTGGGCGCCATCGAGAGA
TATCCCGACTGGCATTTTCATACGATGACCACCTTGCTGTACCCTCCTGT
TGTTCTTATGTGCTACATAAGTCTTACCTGTCACCTAGTCCCACTGTTAT
GCGTGATGTGGCCGCCTCAGTATCCTCCTCGGAGAGCAGTCCTAGAAACT
CATCCGAGTGACCCCCGTGCCGTATTCCCCTCGGAGGCAGTTCGACAATA
CAACGTGCGCCAGAGGCATGCGCCTCTCGGTTATCGTCGACATCTAGTAT
TAATCCCG
back to top

Coding sequence (CDS) from alignment at ACJE01000010.1:1443823..1445480+

>ASPNIDRAFT_121183-T1 ID=ASPNIDRAFT_121183-T1|Name=ASPNIDRAFT_121183-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=3184bp|location=Sequence derived from alignment at ACJE01000010.1:1443823..1445480+ (Aspergillus niger ATCC 1015)
CTGCCCTGGCTATCTATAGACCAGTCCCTGACCATAGAACTTCCTAGACG
GATTGGGCAAACGTCAAAACGACTTCATCTAGCTAGGAATCATGCGTTGC
CTTCGGTAGACATTCTGCTGCCATGCTGTGGTGAACCAATAGATATTATT
CACGATACCATACGCGCGGCGTGTGTCATTGACTACCCTCAATCTGCATT
CCGGATTCTCGTCCTCGATGATGGAAATTCTCTCGAGCTACGACAGTCGG
TAGAAGAGTTGCGTCATACCTGGCCAAACCTTCTTTACTATAGCAGAGGA
ACTAGACCAAGTCAGAAAGTCTTTGCAAAAGCAGGAAACCTGAACTTTGG
CCTATTTGATATCCAGGGAGGAATGGACAAGCCGCCCGAGTTCATCGCCT
CGTTCGATTCGGACTTTCTGCCTGCTCCCAACTTTCTGCGAGCCACGCTT
CCTCATCTGTTGGGGGATGAGAATGTTGGACTGGTAGCTGCCAGGCAAGA
CTACTATAACCTTCCCCCAGGGGACCCACTTGGTCAAAGCCTGGCAGTTT
ATTGGGAGATATTTTTGCCCAGGATGAACGAAATGGGGACGAGTATAGCA
TCAACTACAGGATGTGTTATGCGCCGCGATCTAGCCGTCAAAGTGGGCGG
ATTCCCGACTATAAACGAAGTGGAGGATATCACTCTATCGATGATTTTGC
CAGCGTATGGGAAGCGCGTCGTAGCCGTCGATGAAATGCTGCAGCTTGGA
CGCGTGCCATCCTCGTTGGAAGGTCATGTCCGGCAGAACCGACGATGGAT
CACTGGCTTGACACAGATGATCGCAACTCCCTGGGCACCATCCAGGCAGT
CTATCCCGATTTCGTCGAGATACTACATGGCATTATTTGGTATTCAGTGG
CTTTGGTCACCTCTGAGTCAGTGTGTCGGTTGTGCAATAATCGCTCCTGC
GTTAATATCACGCCAAGCGCTTGTGCCACCCCATTTACTCCAGGTCCAGA
TCCCATTATCCCTGGTAGCTTTCGGACTCGTTTTCCTGTACGAATGGCTC
AAGGCTGCAGCAACGGGGTTTCGATTGTCTGCATTTGCTCATTTCTATGA
TCTGTGGTTATGTGCAGACCGACTGTATACTCTCATTCAATATCATATTC
TCGGGTCACAGGCCGGTAGGTCCTTGGTGACTGGCAGTGCCGAGAACAAC
TGGAACAATCCCACCAAGGTCCCCACGCGAGTGAGACAGTTGAAAAGGGA
TCTATGGGATTCCGGGGTCGGCTTCAACGTCCTTTTCGTGTTTGGTGTCC
TCGCGGGAATCTTCCATTCGGTACTGGGCGCCATCGAGAGATATCCCGAC
TGGCATTTTCATACGATGACCACCTTGCTGTACCCTCCTGTTGTTCTTAT
GTGCTACATAAGTCTTACCTGTCACCTAGTCCCACTGTTATGCGTGATGT
GGCCGCCTCAGTATCCTCCTCGGAGAGCAGTCCTAGAAACTCATCCGAGT
GACCCCCGTGCCGTATTCCCCTCGGAGGCAGTTCGACAATACAACGTGCG
CCAGAGGCATGCGCCTCTCGGTTATCGTCGACATCTAGTATTCTGCCCTG
GCTATCTATAGACCAGTCCCTGACCATAGAACTTCCTAGACGGATTGGGC
AAACGTCAAAACGACTTCATCTAGCTAGGAATCATGCGTTGCCTTCGGTA
GACATTCTGCTGCCATGCTGTGGTGAACCAATAGATATTATTCACGATAC
CATACGCGCGGCGTGTGTCATTGACTACCCTCAATCTGCATTCCGGATTC
TCGTCCTCGATGATGGAAATTCTCTCGAGCTACGACAGTCGGTAGAAGAG
TTGCGTCATACCTGGCCAAACCTTCTTTACTATAGCAGAGGAACTAGACC
AAGTCAGAAAGTCTTTGCAAAAGCAGGAAACCTGAACTTTGGCCTATTTG
ATATCCAGGGAGGAATGGACAAGCCGCCCGAGTTCATCGCCTCGTTCGAT
TCGGACTTTCTGCCTGCTCCCAACTTTCTGCGAGCCACGCTTCCTCATCT
GTTGGGGGATGAGAATGTTGGACTGGTAGCTGCCAGGCAAGACTACTATA
ACCTTCCCCCAGGGGACCCACTTGGTCAAAGCCTGGCAGTTTATTGGGAG
ATATTTTTGCCCAGGATGAACGAAATGGGGACGAGTATAGCATCAACTAC
AGGATGTGTTATGCGCCGCGATCTAGCCGTCAAAGTGGGCGGATTCCCGA
CTATAAACGAAGTGGAGGATATCACTCTATCGATGATTTTGCCAGCGTAT
GGGAAGCGCGTCGTAGCCGTCGATGAAATGCTGCAGCTTGGACGCGTGCC
ATCCTCGTTGGAAGGTCATGTCCGGCAGAACCGACGATGGATCACTGGCT
TGACACAGATGATCGCAACTCCCTGGGCACCATCCAGGCAGTCTATCCCG
ATTTCGTCGAGATACTACATGGCATTATTTGGTATTCAGTGGCTTTGGTC
ACCTCTGAGTCAGTGTGTCGGTTGTGCAATAATCGCTCCTGCGTTAATAT
CACGCCAAGCGCTTGTGCCACCCCATTTACTCCAGGTCCAGATCCCATTA
TCCCTGGTAGCTTTCGGACTCGTTTTCCTGTACGAATGGCTCAAGGCTGC
AGCAACGGGGTTTCGATTGTCTGCATTTGCTCATTTCTATGATCTGTGGT
TATGTGCAGACCGACTGTATACTCTCATTCAATATCATATTCTCGGGTCA
CAGGCCGGTAGGTCCTTGGTGACTGGCAGTGCCGAGAACAACTGGAACAA
TCCCACCAAGGTCCCCACGCGAGTGAGACAGTTGAAAAGGGATCTATGGG
ATTCCGGGGTCGGCTTCAACGTCCTTTTCGTGTTTGGTGTCCTCGCGGGA
ATCTTCCATTCGGTACTGGGCGCCATCGAGAGATATCCCGACTGGCATTT
TCATACGATGACCACCTTGCTGTACCCTCCTGTTGTTCTTATGTGCTACA
TAAGTCTTACCTGTCACCTAGTCCCACTGTTATGCGTGATGTGGCCGCCT
CAGTATCCTCCTCGGAGAGCAGTCCTAGAAACTCATCCGAGTGACCCCCG
TGCCGTATTCCCCTCGGAGGCAGTTCGACAATACAACGTGCGCCAGAGGC
ATGCGCCTCTCGGTTATCGTCGACATCTAGTATT
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ASPNIDRAFT_121183ASPNIDRAFT_121183Aspergillus niger ATCC 1015gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_121183-T1.exon1ASPNIDRAFT_121183-T1.exon1Aspergillus niger ATCC 1015exon
ASPNIDRAFT_121183-T1.exon2ASPNIDRAFT_121183-T1.exon2Aspergillus niger ATCC 1015exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_121183-T1.cdsASPNIDRAFT_121183-T1.cdsAspergillus niger ATCC 1015CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_121183-T1.utr3p1ASPNIDRAFT_121183-T1.utr3p1Aspergillus niger ATCC 1015three_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_121183-T1ASPNIDRAFT_121183-T1-proteinAspergillus niger ATCC 1015polypeptide


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR029044
DBxrefPFAM:PF13632
DBxrefPFAM:PF13506
DBxrefPFAM:PF13641
DBxrefPFAM:PF00535
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000010.1supercontigACJE01000010.1:1443823..1445480 +
Powered by Drupal