You are here

Home

ASPNIDRAFT_122329-T1, ASPNIDRAFT_122329-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_122329-T1
Unique NameASPNIDRAFT_122329-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000021.1:646838..648417-

Legend: polypeptideCDSexonthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_122329-T1 ID=ASPNIDRAFT_122329-T1|Name=ASPNIDRAFT_122329-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=1580bp|location=Sequence derived from alignment at ACJE01000021.1:646838..648417- (Aspergillus niger ATCC 1015)
TCCATGTCTCGATCCTTCAACGGGTGCAAACGATGTAAAGCCCGGCGGCA
GAAATGCGACGAGCAGCGTCCCAGTTGTGGTCGCTGCATGTCGGCCGGCA
CGCAATGTCGATATGCGATGCAGCTGCAGTGGGGGGGCCGAGCCTTTTCG
CGCTCAAGGTTTGGAGCCTGCGTGGGAACAGGAGGCATGCAAAAACTAGG
TGGGTGAATGCCATGTAGCCTGTTGTATACCGGGATATACTGATCTAACT
TTGCTACTCGCAATCAGAGTACTCCCCGGGCGAATTCATCTACACCACCA
AAGCTGCGGCTGCTCTTTCTCCGGGCACAATAGCAACATCTCCTTCTACC
CAACCGACGAACACCACCTTAGTCCGCCATATTGATCCGTTCGCCTCCCT
CTCTACCGATCAGAAATCCCTCCTACACCACTTCCTCAATGATGCCTCTC
AGATCACGGCTTGTCATTCCGGCATGCAGCGCGATATCTGCAAGATGCTC
GTCCCTATGGCCCTTCAGACCCCGTCCCTCCTCTACGCAACCATGGCCCT
CTCCGCTATCCACCTCCAAGCCCTCCACAACCAATCTGAAAACGTCAAGT
CTGCACCCGAAATCGCACGCTTTATGGCCCTCAGTTTAGAACATTTCAGA
ACGGAACTACAGAACCCTGCGAGCAGGGGATCGGATGCGCTGCTTGCAAC
CGCCCGGACCCTCTGCCTCGCCGAGATTCATTCCGGTGCAATTCACCCCA
ATTCCTGGCGCGCACATATCGAAGGTGCCCGGGCTCTGATGGAGGCCTCG
GATCAGAGCGGGGCGCTGTCCCCCAAGTCGCCGGAGGGGTTCAGACGGTA
TCTAGATAGATGGTATCGGTCAATTGTGTCGCTGACAGCGTTGACGGGGA
ATGGGCCGCCCATAGGTGAAGCTACGGATCAGCTGGTCTCCATTGGACCA
AACCAGTCGGCCTCGCCGGATTACTTGGATGATTACTGGGGTTTTACGGT
AAACTTGGCCACAATCTTCCGGAGGATTGGGGCTGTCGCGTGGCGGGAGC
ATCAGAGTCGGGGCCAGGAAGGTGATGAGAGTTCTGTCCAAGGGAACGAG
ATCAGCGTACACAACGAAGCTGCAGCGCTGGAGTCGTCGCTCCGCCATCT
CATGGAACAAGAAGTGGCTTCGCAGCCCGCATTCTACCCTGGCGTCGTGG
AGGGTCTTTCTGCGGAATGTATCCAACAGCTCATGCTCTGTAACGAGGCC
TTCCAACTCAGTGCTCTCATTCAGATCCATCGTCGACTGCGAAAGACACC
AGCGTCTGCACCGGTGGTGCAGGAGTCGGTTAAGAGGATCCTTGAATGCA
CGGCTCAAATCGGGCCGTCTCCGGGACTGAGCCCGTGGGTAATGCTGACT
ACCCCGCTATTCATCGCTGGGTGTGAGGCGCGCGGAGAAGACCGTGAGCA
AGTGCGACGGCTACTGTCCTCGCTGCACGATACCATTCGAGTACCAAATG
TGTTGCAGTCATTGAAGTTTCTGGAACAGTATTGGGCGAATCAGTTGGAT
GAGAACGAGGGGTGGAGTCAATATCTCGGT
back to top

Coding sequence (CDS) from alignment at ACJE01000021.1:646838..648417-

>ASPNIDRAFT_122329-T1 ID=ASPNIDRAFT_122329-T1|Name=ASPNIDRAFT_122329-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=2808bp|location=Sequence derived from alignment at ACJE01000021.1:646838..648417- (Aspergillus niger ATCC 1015)
TCCGCCATATTGATCCGTTCGCCTCCCTCTCTACCGATCAGAAATCCCTC
CTACACCACTTCCTCAATGATGCCTCTCAGATCACGGCTTGTCATTCCGG
CATGCAGCGCGATATCTGCAAGATGCTCGTCCCTATGGCCCTTCAGACCC
CGTCCCTCCTCTACGCAACCATGGCCCTCTCCGCTATCCACCTCCAAGCC
CTCCACAACCAATCTGAAAACGTCAAGTCTGCACCCGAAATCGCACGCTT
TATGGCCCTCAGTTTAGAACATTTCAGAACGGAACTACAGAACCCTGCGA
GCAGGGGATCGGATGCGCTGCTTGCAACCGCCCGGACCCTCTGCCTCGCC
GAGATTCATTCCGGTGCAATTCACCCCAATTCCTGGCGCGCACATATCGA
AGGTGCCCGGGCTCTGATGGAGGCCTCGGATCAGAGCGGGGCGCTGTCCC
CCAAGTCGCCGGAGGGGTTCAGACGGTATCTAGATAGATGGTATCGGTCA
ATTGTGTCGCTGACAGCGTTGACGGGGAATGGGCCGCCCATAGGTGAAGC
TACGGATCAGCTGGTCTCCATTGGACCAAACCAGTCGGCCTCGCCGGATT
ACTTGGATGATTACTGGGGTTTTACGGTAAACTTGGCCACAATCTTCCGG
AGGATTGGGGCTGTCGCGTGGCGGGAGCATCAGAGTCGGGGCCAGGAAGG
TGATGAGAGTTCTGTCCAAGGGAACGAGATCAGCGTACACAACGAAGCTG
CAGCGCTGGAGTCGTCGCTCCGCCATCTCATGGAACAAGAAGTGGCTTCG
CAGCCCGCATTCTACCCTGGCGTCGTGGAGGGTCTTTCTGCGGAATGTAT
CCAACAGCTCATGCTCTGTAACGAGGCCTTCCAACTCAGTGCTCTCATTC
AGATCCATCGTCGACTGCGAAAGACACCAGCGTCTGCACCGGTGGTGCAG
GAGTCGGTTAAGAGGATCCTTGAATGCACGGCTCAAATCGGGCCGTCTCC
GGGACTGAGCCCGTGGGTAATGCTGACTACCCCGCTATTCATCGCTGGGT
GTGAGGCGCGCGGAGAAGACCGTGAGCAAGTGCGACGGCTACTGTCCTCG
CTGCACGATACCATTCGAGTACCAAATGTGTTGCAGTCATTGAAGTTTCT
GGAACAGTATTGGGCGAATCAGTTGGATGAGAACGAGGGGTGGAGTCAAT
ATCTCTCCATGTCTCGATCCTTCAACGGGTGCAAACGATGTAAAGCCCGG
CGGCAGAAATGCGACGAGCAGCGTCCCAGTTGTGGTCGCTGCATGTCGGC
CGGCACGCAATGTCGATATGCGATGCAGCTGCAGTGGGGGGGCCGAGCCT
TTTCGCGCTCAAGGTTTGGAGCCTGCGTGGGAACAGGAGGCATGCAAAAA
CTAGTCCGCCATATTGATCCGTTCGCCTCCCTCTCTACCGATCAGAAATC
CCTCCTACACCACTTCCTCAATGATGCCTCTCAGATCACGGCTTGTCATT
CCGGCATGCAGCGCGATATCTGCAAGATGCTCGTCCCTATGGCCCTTCAG
ACCCCGTCCCTCCTCTACGCAACCATGGCCCTCTCCGCTATCCACCTCCA
AGCCCTCCACAACCAATCTGAAAACGTCAAGTCTGCACCCGAAATCGCAC
GCTTTATGGCCCTCAGTTTAGAACATTTCAGAACGGAACTACAGAACCCT
GCGAGCAGGGGATCGGATGCGCTGCTTGCAACCGCCCGGACCCTCTGCCT
CGCCGAGATTCATTCCGGTGCAATTCACCCCAATTCCTGGCGCGCACATA
TCGAAGGTGCCCGGGCTCTGATGGAGGCCTCGGATCAGAGCGGGGCGCTG
TCCCCCAAGTCGCCGGAGGGGTTCAGACGGTATCTAGATAGATGGTATCG
GTCAATTGTGTCGCTGACAGCGTTGACGGGGAATGGGCCGCCCATAGGTG
AAGCTACGGATCAGCTGGTCTCCATTGGACCAAACCAGTCGGCCTCGCCG
GATTACTTGGATGATTACTGGGGTTTTACGGTAAACTTGGCCACAATCTT
CCGGAGGATTGGGGCTGTCGCGTGGCGGGAGCATCAGAGTCGGGGCCAGG
AAGGTGATGAGAGTTCTGTCCAAGGGAACGAGATCAGCGTACACAACGAA
GCTGCAGCGCTGGAGTCGTCGCTCCGCCATCTCATGGAACAAGAAGTGGC
TTCGCAGCCCGCATTCTACCCTGGCGTCGTGGAGGGTCTTTCTGCGGAAT
GTATCCAACAGCTCATGCTCTGTAACGAGGCCTTCCAACTCAGTGCTCTC
ATTCAGATCCATCGTCGACTGCGAAAGACACCAGCGTCTGCACCGGTGGT
GCAGGAGTCGGTTAAGAGGATCCTTGAATGCACGGCTCAAATCGGGCCGT
CTCCGGGACTGAGCCCGTGGGTAATGCTGACTACCCCGCTATTCATCGCT
GGGTGTGAGGCGCGCGGAGAAGACCGTGAGCAAGTGCGACGGCTACTGTC
CTCGCTGCACGATACCATTCGAGTACCAAATGTGTTGCAGTCATTGAAGT
TTCTGGAACAGTATTGGGCGAATCAGTTGGATGAGAACGAGGGGTGGAGT
CAATATCTCTCCATGTCTCGATCCTTCAACGGGTGCAAACGATGTAAAGC
CCGGCGGCAGAAATGCGACGAGCAGCGTCCCAGTTGTGGTCGCTGCATGT
CGGCCGGCACGCAATGTCGATATGCGATGCAGCTGCAGTGGGGGGGCCGA
GCCTTTTCGCGCTCAAGGTTTGGAGCCTGCGTGGGAACAGGAGGCATGCA
AAAACTAG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
Vocabulary: Molecular Function
TermDefinition
GO:0008270zinc ion binding
GO:0000981DNA-binding transcription factor activity, RNA polymerase II-specific
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ASPNIDRAFT_122329ASPNIDRAFT_122329Aspergillus niger ATCC 1015gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_122329-T1ASPNIDRAFT_122329-T1-proteinAspergillus niger ATCC 1015polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_122329-T1.cdsASPNIDRAFT_122329-T1.cdsAspergillus niger ATCC 1015CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_122329-T1.utr3p1ASPNIDRAFT_122329-T1.utr3p1Aspergillus niger ATCC 1015three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_122329-T1.exon2ASPNIDRAFT_122329-T1.exon2Aspergillus niger ATCC 1015exon
ASPNIDRAFT_122329-T1.exon1ASPNIDRAFT_122329-T1.exon1Aspergillus niger ATCC 1015exon


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR021858
DBxrefInterPro:IPR036864
DBxrefInterPro:IPR001138
DBxrefPFAM:PF00172
DBxrefPFAM:PF11951
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000021.1supercontigACJE01000021.1:646838..648417 -
Powered by Drupal