You are here

Home

ASPNIDRAFT_122980-T1, ASPNIDRAFT_122980-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_122980-T1
Unique NameASPNIDRAFT_122980-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000002.1:1208849..1210434-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_122980-T1 ID=ASPNIDRAFT_122980-T1|Name=ASPNIDRAFT_122980-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=1586bp|location=Sequence derived from alignment at ACJE01000002.1:1208849..1210434- (Aspergillus niger ATCC 1015)
GTTTCGGGAGAAGCACCGCAAGTGCCCGTCGTCTCGCCCAAGAGCGGTAT
GTCTCAACCTCGAAAGCCTCAATGCGACGTAATGCGGCTAATGCTCGACT
AGGCAGCGTCTTTGAGAAGCGACTGATCGAAGCCTACATCGCGGAGAATG
GAAAGGACCCCGTGAATGGAGAAGAGCTCTCCACAGACGACCTCATTGAT
GTCAAATCCCAGCGCGTCGTCCGCCCCAGACCTCCCACCCTCACATCCAT
TCCTTCGTTGCTCAGTGTTTTCCAAGAAGAATGGGATGCCCTGGCTCTCG
AGACCTACACATTGCGACAGACCTTGGCGCAGACCCGCCAGGAATTGAGC
TCCGCGCTCTACCAGCACGATGCCGCCGTTCGCGTGATTGCTCGTTTGAC
AAAGGAGAGAGACGAGGCCCGTGATGCCCTATCCAAGGTCACCGTCGGTG
CCAGGAGTGCTGCTGCCTCCGGTGGTGAAGCTATGCAGGTTGATTCGACC
GGTCTGCCCGAGGCCGTTCTGGCACGTGTTGAGAGCACACAGGCATCGTA
AGTTGCTATGTATAGGATTCCACTGTGTTTGGCATATCTAACAACATACA
GGCTGTCTAAGACACGTCGTAAGCGCCCGGTTCCGGAAGGCTGGGCTACG
GGTGATGCCATCTCCACATTCAAGCCTACGGAGAGCTCCAACCCTCTTTA
CCCCGGCAGCAAGGCATTCGCCGTCAACTCGTCGGGAGAGCTGGCACTCA
TCGGCGGTGCGGACGGTGCCGTTGGCATCTATTCCATTCCCCAGAAGCAG
GTTGTTCAGAATCTGCAGGCAAACGGACCAGTTACCGATGCCGCTTGGGC
AGGCGAGAAGGCTATTGTGGCATCGTCTACGGGCTCCGTGAAGGTCTTCG
AGCACGGCAACGAGGTCGCCAACTTCAACTCCCATGCTGGAGCCGCAACG
GCGCTTGCCGTGCATGCTACCGGTGACATTGTTGCCTCGGTTGGCGCTGA
TAAGAGCTATGTTCTGTATGACCTTACGACGAACTCGGTAATCACTCAGA
TTTTCAGTGACGCATGTGAGTAGCCCGATGATGGATTATATATCCGGATA
TGACTGACTTTTCCTTCCTCTATAGCTCTTCTCTCGGTCAAGATTCACCC
TGATGGTCATTTGGTTGCTGCTGGTGGCGTGGACGGGCAAATCAAGATCT
TCGATATTAAGACTGGCGCGTCCGCTGCCACATTCACCATGTCTGGGCCT
GTGAAGTCTCTTTTCTTCTCCGAGAACGGTGTTTTCCTGGCCGCGGTTAC
CGAGAACTCGACCACTGTGTCCATTTGGGATCTCCGTAGCGCACAGGAGA
GCAAGGTTCTGGAGACGGGCAGTCAGGTTGACTCGATTAACTGGGATTAC
ACTGGACAGTTCCTTCTGACCGCAGGACCTAGTGGCTTGACCGTGCATCA
ATACACCAAGGCATCCAAGTCGTGGTCCGAGCCCTTGCGGAGTGCGGTGC
CCGCGGTTGCGGCGGCTTGGGGCTCTGCCGCCCAGGCTATCGTGGCGTTG
AATAGCGAGGGAGGCGTGACGGAGCTGACGGCACAG
back to top

Coding sequence (CDS) from alignment at ACJE01000002.1:1208849..1210434-

>ASPNIDRAFT_122980-T1 ID=ASPNIDRAFT_122980-T1|Name=ASPNIDRAFT_122980-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=5664bp|location=Sequence derived from alignment at ACJE01000002.1:1208849..1210434- (Aspergillus niger ATCC 1015)
CTCTTCTCTCGGTCAAGATTCACCCTGATGGTCATTTGGTTGCTGCTGGT
GGCGTGGACGGGCAAATCAAGATCTTCGATATTAAGACTGGCGCGTCCGC
TGCCACATTCACCATGTCTGGGCCTGTGAAGTCTCTTTTCTTCTCCGAGA
ACGGTGTTTTCCTGGCCGCGGTTACCGAGAACTCGACCACTGTGTCCATT
TGGGATCTCCGTAGCGCACAGGAGAGCAAGGTTCTGGAGACGGGCAGTCA
GGTTGACTCGATTAACTGGGATTACACTGGACAGTTCCTTCTGACCGCAG
GACCTAGTGGCTTGACCGTGCATCAATACACCAAGGCATCCAAGTCGTGG
TCCGAGCCCTTGCGGAGTGCGGTGCCCGCGGTTGCGGCGGCTTGGGGCTC
TGCCGCCCAGGCTATCGTGGCGTTGAATAGCGAGGGAGGCGTGACGGAGC
TGACGGCACAGGCTGTCTAAGACACGTCGTAAGCGCCCGGTTCCGGAAGG
CTGGGCTACGGGTGATGCCATCTCCACATTCAAGCCTACGGAGAGCTCCA
ACCCTCTTTACCCCGGCAGCAAGGCATTCGCCGTCAACTCGTCGGGAGAG
CTGGCACTCATCGGCGGTGCGGACGGTGCCGTTGGCATCTATTCCATTCC
CCAGAAGCAGGTTGTTCAGAATCTGCAGGCAAACGGACCAGTTACCGATG
CCGCTTGGGCAGGCGAGAAGGCTATTGTGGCATCGTCTACGGGCTCCGTG
AAGGTCTTCGAGCACGGCAACGAGGTCGCCAACTTCAACTCCCATGCTGG
AGCCGCAACGGCGCTTGCCGTGCATGCTACCGGTGACATTGTTGCCTCGG
TTGGCGCTGATAAGAGCTATGTTCTGTATGACCTTACGACGAACTCGGTA
ATCACTCAGATTTTCAGTGACGCATCGTCTTTGAGAAGCGACTGATCGAA
GCCTACATCGCGGAGAATGGAAAGGACCCCGTGAATGGAGAAGAGCTCTC
CACAGACGACCTCATTGATGTCAAATCCCAGCGCGTCGTCCGCCCCAGAC
CTCCCACCCTCACATCCATTCCTTCGTTGCTCAGTGTTTTCCAAGAAGAA
TGGGATGCCCTGGCTCTCGAGACCTACACATTGCGACAGACCTTGGCGCA
GACCCGCCAGGAATTGAGCTCCGCGCTCTACCAGCACGATGCCGCCGTTC
GCGTGATTGCTCGTTTGACAAAGGAGAGAGACGAGGCCCGTGATGCCCTA
TCCAAGGTCACCGTCGGTGCCAGGAGTGCTGCTGCCTCCGGTGGTGAAGC
TATGCAGGTTGATTCGACCGGTCTGCCCGAGGCCGTTCTGGCACGTGTTG
AGAGCACACAGGCATCGTTTCGGGAGAAGCACCGCAAGTGCCCGTCGTCT
CGCCCAAGAGCGGTATCTCTTCTCTCGGTCAAGATTCACCCTGATGGTCA
TTTGGTTGCTGCTGGTGGCGTGGACGGGCAAATCAAGATCTTCGATATTA
AGACTGGCGCGTCCGCTGCCACATTCACCATGTCTGGGCCTGTGAAGTCT
CTTTTCTTCTCCGAGAACGGTGTTTTCCTGGCCGCGGTTACCGAGAACTC
GACCACTGTGTCCATTTGGGATCTCCGTAGCGCACAGGAGAGCAAGGTTC
TGGAGACGGGCAGTCAGGTTGACTCGATTAACTGGGATTACACTGGACAG
TTCCTTCTGACCGCAGGACCTAGTGGCTTGACCGTGCATCAATACACCAA
GGCATCCAAGTCGTGGTCCGAGCCCTTGCGGAGTGCGGTGCCCGCGGTTG
CGGCGGCTTGGGGCTCTGCCGCCCAGGCTATCGTGGCGTTGAATAGCGAG
GGAGGCGTGACGGAGCTGACGGCACAGGCTGTCTAAGACACGTCGTAAGC
GCCCGGTTCCGGAAGGCTGGGCTACGGGTGATGCCATCTCCACATTCAAG
CCTACGGAGAGCTCCAACCCTCTTTACCCCGGCAGCAAGGCATTCGCCGT
CAACTCGTCGGGAGAGCTGGCACTCATCGGCGGTGCGGACGGTGCCGTTG
GCATCTATTCCATTCCCCAGAAGCAGGTTGTTCAGAATCTGCAGGCAAAC
GGACCAGTTACCGATGCCGCTTGGGCAGGCGAGAAGGCTATTGTGGCATC
GTCTACGGGCTCCGTGAAGGTCTTCGAGCACGGCAACGAGGTCGCCAACT
TCAACTCCCATGCTGGAGCCGCAACGGCGCTTGCCGTGCATGCTACCGGT
GACATTGTTGCCTCGGTTGGCGCTGATAAGAGCTATGTTCTGTATGACCT
TACGACGAACTCGGTAATCACTCAGATTTTCAGTGACGCATCGTCTTTGA
GAAGCGACTGATCGAAGCCTACATCGCGGAGAATGGAAAGGACCCCGTGA
ATGGAGAAGAGCTCTCCACAGACGACCTCATTGATGTCAAATCCCAGCGC
GTCGTCCGCCCCAGACCTCCCACCCTCACATCCATTCCTTCGTTGCTCAG
TGTTTTCCAAGAAGAATGGGATGCCCTGGCTCTCGAGACCTACACATTGC
GACAGACCTTGGCGCAGACCCGCCAGGAATTGAGCTCCGCGCTCTACCAG
CACGATGCCGCCGTTCGCGTGATTGCTCGTTTGACAAAGGAGAGAGACGA
GGCCCGTGATGCCCTATCCAAGGTCACCGTCGGTGCCAGGAGTGCTGCTG
CCTCCGGTGGTGAAGCTATGCAGGTTGATTCGACCGGTCTGCCCGAGGCC
GTTCTGGCACGTGTTGAGAGCACACAGGCATCGTTTCGGGAGAAGCACCG
CAAGTGCCCGTCGTCTCGCCCAAGAGCGGTATCTCTTCTCTCGGTCAAGA
TTCACCCTGATGGTCATTTGGTTGCTGCTGGTGGCGTGGACGGGCAAATC
AAGATCTTCGATATTAAGACTGGCGCGTCCGCTGCCACATTCACCATGTC
TGGGCCTGTGAAGTCTCTTTTCTTCTCCGAGAACGGTGTTTTCCTGGCCG
CGGTTACCGAGAACTCGACCACTGTGTCCATTTGGGATCTCCGTAGCGCA
CAGGAGAGCAAGGTTCTGGAGACGGGCAGTCAGGTTGACTCGATTAACTG
GGATTACACTGGACAGTTCCTTCTGACCGCAGGACCTAGTGGCTTGACCG
TGCATCAATACACCAAGGCATCCAAGTCGTGGTCCGAGCCCTTGCGGAGT
GCGGTGCCCGCGGTTGCGGCGGCTTGGGGCTCTGCCGCCCAGGCTATCGT
GGCGTTGAATAGCGAGGGAGGCGTGACGGAGCTGACGGCACAGGCTGTCT
AAGACACGTCGTAAGCGCCCGGTTCCGGAAGGCTGGGCTACGGGTGATGC
CATCTCCACATTCAAGCCTACGGAGAGCTCCAACCCTCTTTACCCCGGCA
GCAAGGCATTCGCCGTCAACTCGTCGGGAGAGCTGGCACTCATCGGCGGT
GCGGACGGTGCCGTTGGCATCTATTCCATTCCCCAGAAGCAGGTTGTTCA
GAATCTGCAGGCAAACGGACCAGTTACCGATGCCGCTTGGGCAGGCGAGA
AGGCTATTGTGGCATCGTCTACGGGCTCCGTGAAGGTCTTCGAGCACGGC
AACGAGGTCGCCAACTTCAACTCCCATGCTGGAGCCGCAACGGCGCTTGC
CGTGCATGCTACCGGTGACATTGTTGCCTCGGTTGGCGCTGATAAGAGCT
ATGTTCTGTATGACCTTACGACGAACTCGGTAATCACTCAGATTTTCAGT
GACGCATCGTCTTTGAGAAGCGACTGATCGAAGCCTACATCGCGGAGAAT
GGAAAGGACCCCGTGAATGGAGAAGAGCTCTCCACAGACGACCTCATTGA
TGTCAAATCCCAGCGCGTCGTCCGCCCCAGACCTCCCACCCTCACATCCA
TTCCTTCGTTGCTCAGTGTTTTCCAAGAAGAATGGGATGCCCTGGCTCTC
GAGACCTACACATTGCGACAGACCTTGGCGCAGACCCGCCAGGAATTGAG
CTCCGCGCTCTACCAGCACGATGCCGCCGTTCGCGTGATTGCTCGTTTGA
CAAAGGAGAGAGACGAGGCCCGTGATGCCCTATCCAAGGTCACCGTCGGT
GCCAGGAGTGCTGCTGCCTCCGGTGGTGAAGCTATGCAGGTTGATTCGAC
CGGTCTGCCCGAGGCCGTTCTGGCACGTGTTGAGAGCACACAGGCATCGT
TTCGGGAGAAGCACCGCAAGTGCCCGTCGTCTCGCCCAAGAGCGGTATCT
CTTCTCTCGGTCAAGATTCACCCTGATGGTCATTTGGTTGCTGCTGGTGG
CGTGGACGGGCAAATCAAGATCTTCGATATTAAGACTGGCGCGTCCGCTG
CCACATTCACCATGTCTGGGCCTGTGAAGTCTCTTTTCTTCTCCGAGAAC
GGTGTTTTCCTGGCCGCGGTTACCGAGAACTCGACCACTGTGTCCATTTG
GGATCTCCGTAGCGCACAGGAGAGCAAGGTTCTGGAGACGGGCAGTCAGG
TTGACTCGATTAACTGGGATTACACTGGACAGTTCCTTCTGACCGCAGGA
CCTAGTGGCTTGACCGTGCATCAATACACCAAGGCATCCAAGTCGTGGTC
CGAGCCCTTGCGGAGTGCGGTGCCCGCGGTTGCGGCGGCTTGGGGCTCTG
CCGCCCAGGCTATCGTGGCGTTGAATAGCGAGGGAGGCGTGACGGAGCTG
ACGGCACAGGCTGTCTAAGACACGTCGTAAGCGCCCGGTTCCGGAAGGCT
GGGCTACGGGTGATGCCATCTCCACATTCAAGCCTACGGAGAGCTCCAAC
CCTCTTTACCCCGGCAGCAAGGCATTCGCCGTCAACTCGTCGGGAGAGCT
GGCACTCATCGGCGGTGCGGACGGTGCCGTTGGCATCTATTCCATTCCCC
AGAAGCAGGTTGTTCAGAATCTGCAGGCAAACGGACCAGTTACCGATGCC
GCTTGGGCAGGCGAGAAGGCTATTGTGGCATCGTCTACGGGCTCCGTGAA
GGTCTTCGAGCACGGCAACGAGGTCGCCAACTTCAACTCCCATGCTGGAG
CCGCAACGGCGCTTGCCGTGCATGCTACCGGTGACATTGTTGCCTCGGTT
GGCGCTGATAAGAGCTATGTTCTGTATGACCTTACGACGAACTCGGTAAT
CACTCAGATTTTCAGTGACGCATCGTCTTTGAGAAGCGACTGATCGAAGC
CTACATCGCGGAGAATGGAAAGGACCCCGTGAATGGAGAAGAGCTCTCCA
CAGACGACCTCATTGATGTCAAATCCCAGCGCGTCGTCCGCCCCAGACCT
CCCACCCTCACATCCATTCCTTCGTTGCTCAGTGTTTTCCAAGAAGAATG
GGATGCCCTGGCTCTCGAGACCTACACATTGCGACAGACCTTGGCGCAGA
CCCGCCAGGAATTGAGCTCCGCGCTCTACCAGCACGATGCCGCCGTTCGC
GTGATTGCTCGTTTGACAAAGGAGAGAGACGAGGCCCGTGATGCCCTATC
CAAGGTCACCGTCGGTGCCAGGAGTGCTGCTGCCTCCGGTGGTGAAGCTA
TGCAGGTTGATTCGACCGGTCTGCCCGAGGCCGTTCTGGCACGTGTTGAG
AGCACACAGGCATCGTTTCGGGAGAAGCACCGCAAGTGCCCGTCGTCTCG
CCCAAGAGCGGTAT
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0016567protein ubiquitination
Vocabulary: Molecular Function
TermDefinition
GO:0004842ubiquitin-protein transferase activity
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ASPNIDRAFT_122980ASPNIDRAFT_122980Aspergillus niger ATCC 1015gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_122980-T1ASPNIDRAFT_122980-T1-proteinAspergillus niger ATCC 1015polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_122980-T1.cdsASPNIDRAFT_122980-T1.cdsAspergillus niger ATCC 1015CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_122980-T1.exon4ASPNIDRAFT_122980-T1.exon4Aspergillus niger ATCC 1015exon
ASPNIDRAFT_122980-T1.exon3ASPNIDRAFT_122980-T1.exon3Aspergillus niger ATCC 1015exon
ASPNIDRAFT_122980-T1.exon2ASPNIDRAFT_122980-T1.exon2Aspergillus niger ATCC 1015exon
ASPNIDRAFT_122980-T1.exon1ASPNIDRAFT_122980-T1.exon1Aspergillus niger ATCC 1015exon


Properties
Property NameValue
NoteBUSCO:EOG092642I5
DBxrefInterPro:IPR036322
DBxrefInterPro:IPR017986
DBxrefInterPro:IPR013083
DBxrefInterPro:IPR015943
DBxrefInterPro:IPR013915
DBxrefInterPro:IPR003613
DBxrefInterPro:IPR001680
DBxrefPFAM:PF00400
DBxrefPFAM:PF08606
ProductWD-40 repeat protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000002.1supercontigACJE01000002.1:1208849..1210434 -
Powered by Drupal