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ASPNIDRAFT_123651-T1, ASPNIDRAFT_123651-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_123651-T1
Unique NameASPNIDRAFT_123651-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000021.1:3149714..3151132-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_123651-T1 ID=ASPNIDRAFT_123651-T1|Name=ASPNIDRAFT_123651-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=1419bp|location=Sequence derived from alignment at ACJE01000021.1:3149714..3151132- (Aspergillus niger ATCC 1015)
ATGCGCGCCAGCATTCTACCGTTGACTCTGTTCTTGGCCACTCTGGCCGG
GGCGCAACTCTCCGGCCCCGTTGGCCCGCTAGTGGACTACAGCACCAAAG
CCAGAAACCAGACCTGCAATATCATCGATTACGGGGCTGTCGCAGATGGT
AAAACGGATATATCGCAGGCTCTACTTGATGCCTGGGGAAACTGTTCCGT
GGGGGGACTGGTCTACATCCCACCCGGTAACTACTCGCTGGCCGAGGACA
TTGAGCTCAAGCACGGCCAGTCCTCTGCAATTCAGCTAGACGGTGTGGTT
ATGCGCGGACACCGCGGCTCGTACCAGATGATCCTTATCCGTGACTGCAA
TGACTTCGAATTTTTCAGCGGCAATTCCCGCGGGGCCATTCAGGGCTTTG
GTTACGAATATCTGCAGAATGACACCTACGGCGAGAGACTCTTGCGCATC
CAAGAGGTTAACAATTTCTCGGTGCATGGATTCGCACTAATTGACTCGCC
TTCCTACTACATTGTTTTCGATACGGTCACCAGTGGGGAGGTATATAACA
TCTTGATCCGCGGCGTGACATCTGTGGGAGCGACAGATGCTATCGACGTA
TGGGGAGAGAACATGTGGTTCCATGACATTGAAGTGAGCAACGGCGATGA
ATGTGTCACCGTCAAGTCTCCGGCGCACAATTATCTGATTGAGAACATCT
ACTGCAATCTCAGTGGTGGGACCGCGATTGGATCCTTAGGCACGGGCACC
AACATTTCCGACATCCACTACCGCAATCTCTACATGAACCAAGCAGATGC
GTGCTTTCTGAAATCCAACAATGGGGATGGGATTGTCAAAAATATCATCT
GGGAGAATGTCATAGTCCACGGCGGTCCGTACCCGCTGGCCATAGACGAG
GCCTGGGGAGATGATCGAGGATCCGTAGGAGTTCAAGTGTCCAACCTCAC
ATTCCGAGTAAGTACACGATAATATTTCAATGTCTTAAGAGATCCTAATT
TGCTTTGTTATATAGAACTGGCACGGAGAATCCGTGAGCGCCTCACGCCC
AGTCATCCGCCTACAATGTGACTCCGACGTCCCGTGCTACGATATTACCA
TCGAAAACGTGAACCTGTGGGCCAACGACAGCAACTATGTGGTTTGGCAG
TGCGAGAACGCCTATGGAGATGGGGCCTGTCTCTCTAGTGCAGAGGGAAC
AAAAGATTTGAAAACCTTTACCAGCAAACAAACTATAACTGCCACCCCGT
ATGTGACTTGTCCATTCTTTTCCACCGAAATTGCTAACAAGAAGATAGGT
CCTATGCTGCGCCAACCATGGCAGCTGACTTCACCTCTAATCTGCCATCA
ACGAGCCCTTTTACTATTCCTCCCATGCCGACAAGTTTCTACCCCGGTGC
TACTCCCATCTCAACCCTC
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Coding sequence (CDS) from alignment at ACJE01000021.1:3149714..3151132-

>ASPNIDRAFT_123651-T1 ID=ASPNIDRAFT_123651-T1|Name=ASPNIDRAFT_123651-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=3933bp|location=Sequence derived from alignment at ACJE01000021.1:3149714..3151132- (Aspergillus niger ATCC 1015)
GTCCTATGCTGCGCCAACCATGGCAGCTGACTTCACCTCTAATCTGCCAT
CAACGAGCCCTTTTACTATTCCTCCCATGCCGACAAGTTTCTACCCCGGT
GCTACTCCCATCTCAACCCTCAACTGGCACGGAGAATCCGTGAGCGCCTC
ACGCCCAGTCATCCGCCTACAATGTGACTCCGACGTCCCGTGCTACGATA
TTACCATCGAAAACGTGAACCTGTGGGCCAACGACAGCAACTATGTGGTT
TGGCAGTGCGAGAACGCCTATGGAGATGGGGCCTGTCTCTCTAGTGCAGA
GGGAACAAAAGATTTGAAAACCTTTACCAGCAAACAAACTATAACTGCCA
CCCCATGCGCGCCAGCATTCTACCGTTGACTCTGTTCTTGGCCACTCTGG
CCGGGGCGCAACTCTCCGGCCCCGTTGGCCCGCTAGTGGACTACAGCACC
AAAGCCAGAAACCAGACCTGCAATATCATCGATTACGGGGCTGTCGCAGA
TGGTAAAACGGATATATCGCAGGCTCTACTTGATGCCTGGGGAAACTGTT
CCGTGGGGGGACTGGTCTACATCCCACCCGGTAACTACTCGCTGGCCGAG
GACATTGAGCTCAAGCACGGCCAGTCCTCTGCAATTCAGCTAGACGGTGT
GGTTATGCGCGGACACCGCGGCTCGTACCAGATGATCCTTATCCGTGACT
GCAATGACTTCGAATTTTTCAGCGGCAATTCCCGCGGGGCCATTCAGGGC
TTTGGTTACGAATATCTGCAGAATGACACCTACGGCGAGAGACTCTTGCG
CATCCAAGAGGTTAACAATTTCTCGGTGCATGGATTCGCACTAATTGACT
CGCCTTCCTACTACATTGTTTTCGATACGGTCACCAGTGGGGAGGTATAT
AACATCTTGATCCGCGGCGTGACATCTGTGGGAGCGACAGATGCTATCGA
CGTATGGGGAGAGAACATGTGGTTCCATGACATTGAAGTGAGCAACGGCG
ATGAATGTGTCACCGTCAAGTCTCCGGCGCACAATTATCTGATTGAGAAC
ATCTACTGCAATCTCAGTGGTGGGACCGCGATTGGATCCTTAGGCACGGG
CACCAACATTTCCGACATCCACTACCGCAATCTCTACATGAACCAAGCAG
ATGCGTGCTTTCTGAAATCCAACAATGGGGATGGGATTGTCAAAAATATC
ATCTGGGAGAATGTCATAGTCCACGGCGGTCCGTACCCGCTGGCCATAGA
CGAGGCCTGGGGAGATGATCGAGGATCCGTAGGAGTTCAAGTGTCCAACC
TCACATTCCGAGTCCTATGCTGCGCCAACCATGGCAGCTGACTTCACCTC
TAATCTGCCATCAACGAGCCCTTTTACTATTCCTCCCATGCCGACAAGTT
TCTACCCCGGTGCTACTCCCATCTCAACCCTCAACTGGCACGGAGAATCC
GTGAGCGCCTCACGCCCAGTCATCCGCCTACAATGTGACTCCGACGTCCC
GTGCTACGATATTACCATCGAAAACGTGAACCTGTGGGCCAACGACAGCA
ACTATGTGGTTTGGCAGTGCGAGAACGCCTATGGAGATGGGGCCTGTCTC
TCTAGTGCAGAGGGAACAAAAGATTTGAAAACCTTTACCAGCAAACAAAC
TATAACTGCCACCCCATGCGCGCCAGCATTCTACCGTTGACTCTGTTCTT
GGCCACTCTGGCCGGGGCGCAACTCTCCGGCCCCGTTGGCCCGCTAGTGG
ACTACAGCACCAAAGCCAGAAACCAGACCTGCAATATCATCGATTACGGG
GCTGTCGCAGATGGTAAAACGGATATATCGCAGGCTCTACTTGATGCCTG
GGGAAACTGTTCCGTGGGGGGACTGGTCTACATCCCACCCGGTAACTACT
CGCTGGCCGAGGACATTGAGCTCAAGCACGGCCAGTCCTCTGCAATTCAG
CTAGACGGTGTGGTTATGCGCGGACACCGCGGCTCGTACCAGATGATCCT
TATCCGTGACTGCAATGACTTCGAATTTTTCAGCGGCAATTCCCGCGGGG
CCATTCAGGGCTTTGGTTACGAATATCTGCAGAATGACACCTACGGCGAG
AGACTCTTGCGCATCCAAGAGGTTAACAATTTCTCGGTGCATGGATTCGC
ACTAATTGACTCGCCTTCCTACTACATTGTTTTCGATACGGTCACCAGTG
GGGAGGTATATAACATCTTGATCCGCGGCGTGACATCTGTGGGAGCGACA
GATGCTATCGACGTATGGGGAGAGAACATGTGGTTCCATGACATTGAAGT
GAGCAACGGCGATGAATGTGTCACCGTCAAGTCTCCGGCGCACAATTATC
TGATTGAGAACATCTACTGCAATCTCAGTGGTGGGACCGCGATTGGATCC
TTAGGCACGGGCACCAACATTTCCGACATCCACTACCGCAATCTCTACAT
GAACCAAGCAGATGCGTGCTTTCTGAAATCCAACAATGGGGATGGGATTG
TCAAAAATATCATCTGGGAGAATGTCATAGTCCACGGCGGTCCGTACCCG
CTGGCCATAGACGAGGCCTGGGGAGATGATCGAGGATCCGTAGGAGTTCA
AGTGTCCAACCTCACATTCCGAGTCCTATGCTGCGCCAACCATGGCAGCT
GACTTCACCTCTAATCTGCCATCAACGAGCCCTTTTACTATTCCTCCCAT
GCCGACAAGTTTCTACCCCGGTGCTACTCCCATCTCAACCCTCAACTGGC
ACGGAGAATCCGTGAGCGCCTCACGCCCAGTCATCCGCCTACAATGTGAC
TCCGACGTCCCGTGCTACGATATTACCATCGAAAACGTGAACCTGTGGGC
CAACGACAGCAACTATGTGGTTTGGCAGTGCGAGAACGCCTATGGAGATG
GGGCCTGTCTCTCTAGTGCAGAGGGAACAAAAGATTTGAAAACCTTTACC
AGCAAACAAACTATAACTGCCACCCCATGCGCGCCAGCATTCTACCGTTG
ACTCTGTTCTTGGCCACTCTGGCCGGGGCGCAACTCTCCGGCCCCGTTGG
CCCGCTAGTGGACTACAGCACCAAAGCCAGAAACCAGACCTGCAATATCA
TCGATTACGGGGCTGTCGCAGATGGTAAAACGGATATATCGCAGGCTCTA
CTTGATGCCTGGGGAAACTGTTCCGTGGGGGGACTGGTCTACATCCCACC
CGGTAACTACTCGCTGGCCGAGGACATTGAGCTCAAGCACGGCCAGTCCT
CTGCAATTCAGCTAGACGGTGTGGTTATGCGCGGACACCGCGGCTCGTAC
CAGATGATCCTTATCCGTGACTGCAATGACTTCGAATTTTTCAGCGGCAA
TTCCCGCGGGGCCATTCAGGGCTTTGGTTACGAATATCTGCAGAATGACA
CCTACGGCGAGAGACTCTTGCGCATCCAAGAGGTTAACAATTTCTCGGTG
CATGGATTCGCACTAATTGACTCGCCTTCCTACTACATTGTTTTCGATAC
GGTCACCAGTGGGGAGGTATATAACATCTTGATCCGCGGCGTGACATCTG
TGGGAGCGACAGATGCTATCGACGTATGGGGAGAGAACATGTGGTTCCAT
GACATTGAAGTGAGCAACGGCGATGAATGTGTCACCGTCAAGTCTCCGGC
GCACAATTATCTGATTGAGAACATCTACTGCAATCTCAGTGGTGGGACCG
CGATTGGATCCTTAGGCACGGGCACCAACATTTCCGACATCCACTACCGC
AATCTCTACATGAACCAAGCAGATGCGTGCTTTCTGAAATCCAACAATGG
GGATGGGATTGTCAAAAATATCATCTGGGAGAATGTCATAGTCCACGGCG
GTCCGTACCCGCTGGCCATAGACGAGGCCTGGGGAGATGATCGAGGATCC
GTAGGAGTTCAAGTGTCCAACCTCACATTCCGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0005975carbohydrate metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0004650polygalacturonase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ASPNIDRAFT_123651ASPNIDRAFT_123651Aspergillus niger ATCC 1015gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_123651-T1ASPNIDRAFT_123651-T1-proteinAspergillus niger ATCC 1015polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_123651-T1.cdsASPNIDRAFT_123651-T1.cdsAspergillus niger ATCC 1015CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_123651-T1.exon3ASPNIDRAFT_123651-T1.exon3Aspergillus niger ATCC 1015exon
ASPNIDRAFT_123651-T1.exon2ASPNIDRAFT_123651-T1.exon2Aspergillus niger ATCC 1015exon
ASPNIDRAFT_123651-T1.exon1ASPNIDRAFT_123651-T1.exon1Aspergillus niger ATCC 1015exon


Properties
Property NameValue
NoteSECRETED:SignalP(1-18)
NoteCAZy:GH28
DBxrefInterPro:IPR011050
DBxrefInterPro:IPR000743
DBxrefInterPro:IPR012334
DBxrefPFAM:PF12708
DBxrefPFAM:PF00295
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000021.1supercontigACJE01000021.1:3149714..3151132 -
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