You are here

Home

ASPNIDRAFT_123681-T1, ASPNIDRAFT_123681-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_123681-T1
Unique NameASPNIDRAFT_123681-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000013.1:776338..777434+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_123681-T1 ID=ASPNIDRAFT_123681-T1|Name=ASPNIDRAFT_123681-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=1097bp|location=Sequence derived from alignment at ACJE01000013.1:776338..777434+ (Aspergillus niger ATCC 1015)
ATGGCCGCCAGTGAGCTCGGGAGACATAACTTTGCAACCTCAGCTGTCCA
GCTAATGGCTGACTGGGGGTTTGATGGGCTAGATATAGATTGGGAGGCAC
GTCACCATGCTTAATCCATCGAAGCAAGCTTACGAGTGCATCTTTAGTAT
CCGGAAAACGAAACCGAGGCGAATAACATGGTAATGCTTCTAAAACAAGT
CCGAGAGGTGAACTGCGAAGCGCTGATAAAGTCGGACGAAATTTTCTGAT
ATTATGCATTTATGCAGGAACTTGACTACTACAGTGACACAAATTCTTTG
AGAAAGCATTTCCTCCTTACAGTTGCTGCACCTGCGGGTCTGCAAATATC
TCTTGCTCTCCGTTTCCTAGAGATGTCTTTTCTGACAATGGTACTACAGG
TTCGGCCAACTACAACATCTTGAAAAAGCAGGAGATGGATCGCTACGTCG
ATTTCTGGAACTTAATGAGCTATGACTATGCTGGCAGCTGGGATTCAATT
AGTGGCCACATGGCCAATCTCTTTGAGTCTACTGATCGACCCGCGTCTAC
TCCTTCTAACACCGATCAGGCAATTGATAGTTACCTCAATGCTAACATAT
CTTCTAGAAAGATTGTCCTCGGGCTGCCGCTATATGGCCGTGGGTTTTCG
AATACGAACGGCCCTGGCCAAGCTTTCACTGGTATTCCTGAGGGCGACTG
GGAGGAGGGTGTTTATGACTATAAGTCACTCCCGCTCAGTGGAGATAATG
TGACCGTATTAGAGGATATTGGGGCAAGCTATAGTTATAGTTCGCAGAAT
CGGCTGATGGTTAGTTATGATACTCCGGAAATAATAAGACGCAAGGCGAA
ATATATCATTGAAAAGGGCCTTGGGGGCGGGATGTGGTGGGAGGTCTCGG
GGGATGAAGAGGGGGAGGACAGTTTGATATCGATAGTGAGTATCTCTCAA
CCACCAGAAAGGCAGTTCTCACATGAACTATAGCTCGTCGAATCCCTGGG
TGGATCAAGAGCATTGGAAAAATCTGAGAATATGTTGATATATCCTGTAT
CGTCCTACAAAAACATTAGGGATGGTTGGTTAAGGCAGAAAACATGA
back to top

Coding sequence (CDS) from alignment at ACJE01000013.1:776338..777434+

>ASPNIDRAFT_123681-T1 ID=ASPNIDRAFT_123681-T1|Name=ASPNIDRAFT_123681-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=2250bp|location=Sequence derived from alignment at ACJE01000013.1:776338..777434+ (Aspergillus niger ATCC 1015)
ATGGCCGCCAGTGAGCTCGGGAGACATAACTTTGCAACCTCAGCTGTCCA
GCTAATGGCTGACTGGGGGTTTGATGGGCTAGATATAGATTGGGAGGCAC
GTTCGGCCAACTACAACATCTTGAAAAAGCAGGAGATGGATCGCTACGTC
GATTTCTGGAACTTAATGAGCTATGACTATGCTGGCAGCTGGGATTCAAT
TAGTGGCCACATGGCCAATCTCTTTGAGTCTACTGATCGACCCGCGTCTA
CTCCTTCTAACACCGATCAGGCAATTGATAGTTACCTCAATGCTAACATA
TCTTCTAGAAAGATTGTCCTCGGGCTGCCGCTATATGGCCGTGGGTTTTC
GAATACGAACGGCCCTGGCCAAGCTTTCACTGGTATTCCTGAGGGCGACT
GGGAGGAGGGTGTTTATGACTATAAGTCACTCCCGCTCAGTGGAGATAAT
GTGACCGTATTAGAGGATATTGGGGCAAGCTATAGTTATAGTTCGCAGAA
TCGGCTGATGGTTAGTTATGATACTCCGGAAATAATAAGACGCAAGGCGA
AATATATCATTGAAAAGGGCCTTGGGGGCGGGATGTGGTGGGAGGTCTCG
GGGGATGAAGAGGGGGAGGACAGTTTGATATCGATACTCGTCGAATCCCT
GGGTGGATCAAGAGCATTGGAAAAATCTGAGAATATGTTGATATATCCTG
TATCGTCCTACAAAAACATTAGGGATGGTTGGTTAAGGCAGAAAACATGA
ATGGCCGCCAGTGAGCTCGGGAGACATAACTTTGCAACCTCAGCTGTCCA
GCTAATGGCTGACTGGGGGTTTGATGGGCTAGATATAGATTGGGAGGCAC
GTTCGGCCAACTACAACATCTTGAAAAAGCAGGAGATGGATCGCTACGTC
GATTTCTGGAACTTAATGAGCTATGACTATGCTGGCAGCTGGGATTCAAT
TAGTGGCCACATGGCCAATCTCTTTGAGTCTACTGATCGACCCGCGTCTA
CTCCTTCTAACACCGATCAGGCAATTGATAGTTACCTCAATGCTAACATA
TCTTCTAGAAAGATTGTCCTCGGGCTGCCGCTATATGGCCGTGGGTTTTC
GAATACGAACGGCCCTGGCCAAGCTTTCACTGGTATTCCTGAGGGCGACT
GGGAGGAGGGTGTTTATGACTATAAGTCACTCCCGCTCAGTGGAGATAAT
GTGACCGTATTAGAGGATATTGGGGCAAGCTATAGTTATAGTTCGCAGAA
TCGGCTGATGGTTAGTTATGATACTCCGGAAATAATAAGACGCAAGGCGA
AATATATCATTGAAAAGGGCCTTGGGGGCGGGATGTGGTGGGAGGTCTCG
GGGGATGAAGAGGGGGAGGACAGTTTGATATCGATACTCGTCGAATCCCT
GGGTGGATCAAGAGCATTGGAAAAATCTGAGAATATGTTGATATATCCTG
TATCGTCCTACAAAAACATTAGGGATGGTTGGTTAAGGCAGAAAACATGA
ATGGCCGCCAGTGAGCTCGGGAGACATAACTTTGCAACCTCAGCTGTCCA
GCTAATGGCTGACTGGGGGTTTGATGGGCTAGATATAGATTGGGAGGCAC
GTTCGGCCAACTACAACATCTTGAAAAAGCAGGAGATGGATCGCTACGTC
GATTTCTGGAACTTAATGAGCTATGACTATGCTGGCAGCTGGGATTCAAT
TAGTGGCCACATGGCCAATCTCTTTGAGTCTACTGATCGACCCGCGTCTA
CTCCTTCTAACACCGATCAGGCAATTGATAGTTACCTCAATGCTAACATA
TCTTCTAGAAAGATTGTCCTCGGGCTGCCGCTATATGGCCGTGGGTTTTC
GAATACGAACGGCCCTGGCCAAGCTTTCACTGGTATTCCTGAGGGCGACT
GGGAGGAGGGTGTTTATGACTATAAGTCACTCCCGCTCAGTGGAGATAAT
GTGACCGTATTAGAGGATATTGGGGCAAGCTATAGTTATAGTTCGCAGAA
TCGGCTGATGGTTAGTTATGATACTCCGGAAATAATAAGACGCAAGGCGA
AATATATCATTGAAAAGGGCCTTGGGGGCGGGATGTGGTGGGAGGTCTCG
GGGGATGAAGAGGGGGAGGACAGTTTGATATCGATACTCGTCGAATCCCT
GGGTGGATCAAGAGCATTGGAAAAATCTGAGAATATGTTGATATATCCTG
TATCGTCCTACAAAAACATTAGGGATGGTTGGTTAAGGCAGAAAACATGA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0005975carbohydrate metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0004553hydrolase activity, hydrolyzing O-glycosyl compounds
GO:0008061chitin binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ASPNIDRAFT_123681ASPNIDRAFT_123681Aspergillus niger ATCC 1015gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_123681-T1.exon1ASPNIDRAFT_123681-T1.exon1Aspergillus niger ATCC 1015exon
ASPNIDRAFT_123681-T1.exon2ASPNIDRAFT_123681-T1.exon2Aspergillus niger ATCC 1015exon
ASPNIDRAFT_123681-T1.exon3ASPNIDRAFT_123681-T1.exon3Aspergillus niger ATCC 1015exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_123681-T1.cdsASPNIDRAFT_123681-T1.cdsAspergillus niger ATCC 1015CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_123681-T1ASPNIDRAFT_123681-T1-proteinAspergillus niger ATCC 1015polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR017853
DBxrefInterPro:IPR001579
DBxrefInterPro:IPR029070
DBxrefInterPro:IPR001223
DBxrefInterPro:IPR011583
DBxrefPFAM:PF00704
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000013.1supercontigACJE01000013.1:776338..777434 +
Powered by Drupal