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ASPNIDRAFT_124656-T1, ASPNIDRAFT_124656-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_124656-T1
Unique NameASPNIDRAFT_124656-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000003.1:229562..231030+

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_124656-T1 ID=ASPNIDRAFT_124656-T1|Name=ASPNIDRAFT_124656-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=1469bp|location=Sequence derived from alignment at ACJE01000003.1:229562..231030+ (Aspergillus niger ATCC 1015)
ATGCCTCTCCCCCAAATCCTAGTCGGCAAAGTCGCCGCCATTACAGGCGG
TTTAACCGGTATTGGCAGGGTAAGGCGAGCAGACACAAGCAAATGAACTC
ACAGTCATCCCCAAGGCCAGTCTAACATGATCTTCTTTTTAGGCCATCGC
TCTCGAATACCTCCGCCACGGCGCAAAAGTAGCCGTAAACCACCTCGGCG
GATCCAAAGAAGAGCCCCTCATCGAAGCGATGCGCAAAGACGTATCTGAG
ATTATCGGGTCCAATAACGACAGTGAGCAGAGCAGCAGCAGATTCATCCT
CGTTGCAGGAGACGTAACACAGCCCGAGACGGGGCGGGAGTTCGTAGCCA
AAGCCGTGGAAGCCTTTGGACGACTCGATGTGTTCGTGAGTAATGCGGGA
GTGTGCAAGTTCGAGGAGTTTCTCGAGTAAGTGGTCAACCCACCCCCTTA
ATAACTTTCCTTTTGTTTGTCTACCGTCTGGAAGAGCCATTTCTAACTGC
CTTATGTTGGCCTACTGTGTAGAGTCGACCCCCCTCTCCTCGGCCACACA
ATCAACACCAACCTCTGTGGCGCATTCTGGGCAACACAAGCAGCAGCACG
GCAAATGGCGCTGGCTCAATCGCCACCGGGAGGCTCCATTATCGGGATTA
GTTCTATCTCTGCACTTGTTGGGGGTGGACAGCAGACGCATTACACGCCC
ACCAAGGCGGGGGTGCTTAGTCTTATGCAGTCGTGTGCGGTGGCATTGGG
CAAATACGGCATCAGATGTAATGCGCTGCTGCCGGGAACGATCCGGACTC
AGCTGAATGATGAGGATATGAGTGATCCGGTGAAGAGGACGTATATGGAG
GGCAGGATTCCGTTGGGACGGTTGGGTCAGCCACCGGATTTGGCGGGGCC
GGCGGTGTTTTTGGCTTGTGAGGAGTTGAGTGGTTATGTGGTAAGTTTTC
TTCTCTCAGCTTTATGTTGGATGTTCTGGAAGAGGCTGCTAATGTGAATC
AATAGACTGGGGCGCAGATACTTGTGGATGGGGGGCTTTTCGTGAATCTT
CAGTAAATGAAACGATATTATTGTGATGATCTCTCTGATGTGGACATACT
TGGTTATGGCGATCGGTGTACATACATACTTCTAGCATATGAATCGAATC
AAGTACTACTATCTAGATTTCAATCGCATATGCTTTGACTGCAACTCCTC
CCCATACACCCTCCTTCTGCTCCTGCGACAAGCCCCTCTTCTCCAAGATG
CCCTCCACCACACTCCTCCACCGTCTCCAGGCGACTGCACTGCCGCCTCC
ACCCACATTACACACCGGCCAGTCAGACCCAAACATGACTCTCTCCGGCC
CAAATGCATCAAAGACCACGTCCGTCCACAGCTGGACCTGGTCGACTAGG
GCAGCAATATCCGGCTCCGATTCCGCCGTCAGCGGGGGAAGCTCCGAGAA
TCCACCGGAAAGCTTCATA
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Coding sequence (CDS) from alignment at ACJE01000003.1:229562..231030+

>ASPNIDRAFT_124656-T1 ID=ASPNIDRAFT_124656-T1|Name=ASPNIDRAFT_124656-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=5545bp|location=Sequence derived from alignment at ACJE01000003.1:229562..231030+ (Aspergillus niger ATCC 1015)
ATGCCTCTCCCCCAAATCCTAGTCGGCAAAGTCGCCGCCATTACAGGCGG
TTTAACCGGTATTGGCAGGGCCATCGCTCTCGAATACCTCCGCCACGGCG
CAAAAGTAGCCGTAAACCACCTCGGCGGATCCAAAGAAGAGCCCCTCATC
GAAGCGATGCGCAAAGACGTATCTGAGATTATCGGGTCCAATAACGACAG
TGAGCAGAGCAGCAGCAGATTCATCCTCGTTGCAGGAGACGTAACACAGC
CCGAGACGGGGCGGGAGTTCGTAGCCAAAGCCGTGGAAGCCTTTGGACGA
CTCGATGTGTTCGTGAGTAATGCGGGAGTGTGCAAGTTCGAGGAGTTTCT
CGAAGTCGACCCCCCTCTCCTCGGCCACACAATCAACACCAACCTCTGTG
GCGCATTCTGGGCAACACAAGCAGCAGCACGGCAAATGGCGCTGGCTCAA
TCGCCACCGGGAGGCTCCATTATCGGGATTAGTTCTATCTCTGCACTTGT
TGGGGGTGGACAGCAGACGCATTACACGCCCACCAAGGCGGGGGTGCTTA
GTCTTATGCAGTCGTGTGCGGTGGCATTGGGCAAATACGGCATCAGATGT
AATGCGCTGCTGCCGGGAACGATCCGGACTCAGCTGAATGATGAGGATAT
GAGTGATCCGGTGAAGAGGACGTATATGGAGGGCAGGATTCCGTTGGGAC
GGTTGGGTCAGCCACCGGATTTGGCGGGGCCGGCGGTGTTTTTGGCTTGT
GAGGAGTTGAGTGGTTATGTGACTGGGGCGCAGATACTTGTGGATGGGGG
GCTTTTCATTTCAATCGCATATGCTTTGACTGCAACTCCTCCCCATACAC
CCTCCTTCTGCTCCTGCGACAAGCCCCTCTTCTCCAAGATGCCCTCCACC
ACACTCCTCCACCGTCTCCAGGCGACTGCACTGCCGCCTCCACCCACATT
ACACACCGGCCAGTCAGACCCAAACATGACTCTCTCCGGCCCAAATGCAT
CAAAGACCACGTCCGTCCACAGCTGGACCTGGTCGACTAGGGCAGCAATA
TCCGGCTCCGATTCCGCCGTCAGCGGGGGAAGCTCCGAGAATCCACCGGA
AAGCTTCATATGCCTCTCCCCCAAATCCTAGTCGGCAAAGTCGCCGCCAT
TACAGGCGGTTTAACCGGTATTGGCAGGGCCATCGCTCTCGAATACCTCC
GCCACGGCGCAAAAGTAGCCGTAAACCACCTCGGCGGATCCAAAGAAGAG
CCCCTCATCGAAGCGATGCGCAAAGACGTATCTGAGATTATCGGGTCCAA
TAACGACAGTGAGCAGAGCAGCAGCAGATTCATCCTCGTTGCAGGAGACG
TAACACAGCCCGAGACGGGGCGGGAGTTCGTAGCCAAAGCCGTGGAAGCC
TTTGGACGACTCGATGTGTTCGTGAGTAATGCGGGAGTGTGCAAGTTCGA
GGAGTTTCTCGAAGTCGACCCCCCTCTCCTCGGCCACACAATCAACACCA
ACCTCTGTGGCGCATTCTGGGCAACACAAGCAGCAGCACGGCAAATGGCG
CTGGCTCAATCGCCACCGGGAGGCTCCATTATCGGGATTAGTTCTATCTC
TGCACTTGTTGGGGGTGGACAGCAGACGCATTACACGCCCACCAAGGCGG
GGGTGCTTAGTCTTATGCAGTCGTGTGCGGTGGCATTGGGCAAATACGGC
ATCAGATGTAATGCGCTGCTGCCGGGAACGATCCGGACTCAGCTGAATGA
TGAGGATATGAGTGATCCGGTGAAGAGGACGTATATGGAGGGCAGGATTC
CGTTGGGACGGTTGGGTCAGCCACCGGATTTGGCGGGGCCGGCGGTGTTT
TTGGCTTGTGAGGAGTTGAGTGGTTATGTGACTGGGGCGCAGATACTTGT
GGATGGGGGGCTTTTCATTTCAATCGCATATGCTTTGACTGCAACTCCTC
CCCATACACCCTCCTTCTGCTCCTGCGACAAGCCCCTCTTCTCCAAGATG
CCCTCCACCACACTCCTCCACCGTCTCCAGGCGACTGCACTGCCGCCTCC
ACCCACATTACACACCGGCCAGTCAGACCCAAACATGACTCTCTCCGGCC
CAAATGCATCAAAGACCACGTCCGTCCACAGCTGGACCTGGTCGACTAGG
GCAGCAATATCCGGCTCCGATTCCGCCGTCAGCGGGGGAAGCTCCGAGAA
TCCACCGGAAAGCTTCATATGCCTCTCCCCCAAATCCTAGTCGGCAAAGT
CGCCGCCATTACAGGCGGTTTAACCGGTATTGGCAGGGCCATCGCTCTCG
AATACCTCCGCCACGGCGCAAAAGTAGCCGTAAACCACCTCGGCGGATCC
AAAGAAGAGCCCCTCATCGAAGCGATGCGCAAAGACGTATCTGAGATTAT
CGGGTCCAATAACGACAGTGAGCAGAGCAGCAGCAGATTCATCCTCGTTG
CAGGAGACGTAACACAGCCCGAGACGGGGCGGGAGTTCGTAGCCAAAGCC
GTGGAAGCCTTTGGACGACTCGATGTGTTCGTGAGTAATGCGGGAGTGTG
CAAGTTCGAGGAGTTTCTCGAAGTCGACCCCCCTCTCCTCGGCCACACAA
TCAACACCAACCTCTGTGGCGCATTCTGGGCAACACAAGCAGCAGCACGG
CAAATGGCGCTGGCTCAATCGCCACCGGGAGGCTCCATTATCGGGATTAG
TTCTATCTCTGCACTTGTTGGGGGTGGACAGCAGACGCATTACACGCCCA
CCAAGGCGGGGGTGCTTAGTCTTATGCAGTCGTGTGCGGTGGCATTGGGC
AAATACGGCATCAGATGTAATGCGCTGCTGCCGGGAACGATCCGGACTCA
GCTGAATGATGAGGATATGAGTGATCCGGTGAAGAGGACGTATATGGAGG
GCAGGATTCCGTTGGGACGGTTGGGTCAGCCACCGGATTTGGCGGGGCCG
GCGGTGTTTTTGGCTTGTGAGGAGTTGAGTGGTTATGTGACTGGGGCGCA
GATACTTGTGGATGGGGGGCTTTTCATTTCAATCGCATATGCTTTGACTG
CAACTCCTCCCCATACACCCTCCTTCTGCTCCTGCGACAAGCCCCTCTTC
TCCAAGATGCCCTCCACCACACTCCTCCACCGTCTCCAGGCGACTGCACT
GCCGCCTCCACCCACATTACACACCGGCCAGTCAGACCCAAACATGACTC
TCTCCGGCCCAAATGCATCAAAGACCACGTCCGTCCACAGCTGGACCTGG
TCGACTAGGGCAGCAATATCCGGCTCCGATTCCGCCGTCAGCGGGGGAAG
CTCCGAGAATCCACCGGAAAGCTTCATATGCCTCTCCCCCAAATCCTAGT
CGGCAAAGTCGCCGCCATTACAGGCGGTTTAACCGGTATTGGCAGGGCCA
TCGCTCTCGAATACCTCCGCCACGGCGCAAAAGTAGCCGTAAACCACCTC
GGCGGATCCAAAGAAGAGCCCCTCATCGAAGCGATGCGCAAAGACGTATC
TGAGATTATCGGGTCCAATAACGACAGTGAGCAGAGCAGCAGCAGATTCA
TCCTCGTTGCAGGAGACGTAACACAGCCCGAGACGGGGCGGGAGTTCGTA
GCCAAAGCCGTGGAAGCCTTTGGACGACTCGATGTGTTCGTGAGTAATGC
GGGAGTGTGCAAGTTCGAGGAGTTTCTCGAAGTCGACCCCCCTCTCCTCG
GCCACACAATCAACACCAACCTCTGTGGCGCATTCTGGGCAACACAAGCA
GCAGCACGGCAAATGGCGCTGGCTCAATCGCCACCGGGAGGCTCCATTAT
CGGGATTAGTTCTATCTCTGCACTTGTTGGGGGTGGACAGCAGACGCATT
ACACGCCCACCAAGGCGGGGGTGCTTAGTCTTATGCAGTCGTGTGCGGTG
GCATTGGGCAAATACGGCATCAGATGTAATGCGCTGCTGCCGGGAACGAT
CCGGACTCAGCTGAATGATGAGGATATGAGTGATCCGGTGAAGAGGACGT
ATATGGAGGGCAGGATTCCGTTGGGACGGTTGGGTCAGCCACCGGATTTG
GCGGGGCCGGCGGTGTTTTTGGCTTGTGAGGAGTTGAGTGGTTATGTGAC
TGGGGCGCAGATACTTGTGGATGGGGGGCTTTTCATTTCAATCGCATATG
CTTTGACTGCAACTCCTCCCCATACACCCTCCTTCTGCTCCTGCGACAAG
CCCCTCTTCTCCAAGATGCCCTCCACCACACTCCTCCACCGTCTCCAGGC
GACTGCACTGCCGCCTCCACCCACATTACACACCGGCCAGTCAGACCCAA
ACATGACTCTCTCCGGCCCAAATGCATCAAAGACCACGTCCGTCCACAGC
TGGACCTGGTCGACTAGGGCAGCAATATCCGGCTCCGATTCCGCCGTCAG
CGGGGGAAGCTCCGAGAATCCACCGGAAAGCTTCATATGCCTCTCCCCCA
AATCCTAGTCGGCAAAGTCGCCGCCATTACAGGCGGTTTAACCGGTATTG
GCAGGGCCATCGCTCTCGAATACCTCCGCCACGGCGCAAAAGTAGCCGTA
AACCACCTCGGCGGATCCAAAGAAGAGCCCCTCATCGAAGCGATGCGCAA
AGACGTATCTGAGATTATCGGGTCCAATAACGACAGTGAGCAGAGCAGCA
GCAGATTCATCCTCGTTGCAGGAGACGTAACACAGCCCGAGACGGGGCGG
GAGTTCGTAGCCAAAGCCGTGGAAGCCTTTGGACGACTCGATGTGTTCGT
GAGTAATGCGGGAGTGTGCAAGTTCGAGGAGTTTCTCGAAGTCGACCCCC
CTCTCCTCGGCCACACAATCAACACCAACCTCTGTGGCGCATTCTGGGCA
ACACAAGCAGCAGCACGGCAAATGGCGCTGGCTCAATCGCCACCGGGAGG
CTCCATTATCGGGATTAGTTCTATCTCTGCACTTGTTGGGGGTGGACAGC
AGACGCATTACACGCCCACCAAGGCGGGGGTGCTTAGTCTTATGCAGTCG
TGTGCGGTGGCATTGGGCAAATACGGCATCAGATGTAATGCGCTGCTGCC
GGGAACGATCCGGACTCAGCTGAATGATGAGGATATGAGTGATCCGGTGA
AGAGGACGTATATGGAGGGCAGGATTCCGTTGGGACGGTTGGGTCAGCCA
CCGGATTTGGCGGGGCCGGCGGTGTTTTTGGCTTGTGAGGAGTTGAGTGG
TTATGTGACTGGGGCGCAGATACTTGTGGATGGGGGGCTTTTCATTTCAA
TCGCATATGCTTTGACTGCAACTCCTCCCCATACACCCTCCTTCTGCTCC
TGCGACAAGCCCCTCTTCTCCAAGATGCCCTCCACCACACTCCTCCACCG
TCTCCAGGCGACTGCACTGCCGCCTCCACCCACATTACACACCGGCCAGT
CAGACCCAAACATGACTCTCTCCGGCCCAAATGCATCAAAGACCACGTCC
GTCCACAGCTGGACCTGGTCGACTAGGGCAGCAATATCCGGCTCCGATTC
CGCCGTCAGCGGGGGAAGCTCCGAGAATCCACCGGAAAGCTTCAT
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
DHG2ASPNIDRAFT_124656Aspergillus niger ATCC 1015gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_124656-T1ASPNIDRAFT_124656-T1-proteinAspergillus niger ATCC 1015polypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_124656-T1.exon1ASPNIDRAFT_124656-T1.exon1Aspergillus niger ATCC 1015exon
ASPNIDRAFT_124656-T1.exon2ASPNIDRAFT_124656-T1.exon2Aspergillus niger ATCC 1015exon
ASPNIDRAFT_124656-T1.exon3ASPNIDRAFT_124656-T1.exon3Aspergillus niger ATCC 1015exon
ASPNIDRAFT_124656-T1.exon4ASPNIDRAFT_124656-T1.exon4Aspergillus niger ATCC 1015exon
ASPNIDRAFT_124656-T1.exon5ASPNIDRAFT_124656-T1.exon5Aspergillus niger ATCC 1015exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_124656-T1.cdsASPNIDRAFT_124656-T1.cdsAspergillus niger ATCC 1015CDS


Properties
Property NameValue
DBxrefInterPro:IPR036291
DBxrefInterPro:IPR002347
DBxrefPFAM:PF08659
DBxrefPFAM:PF13561
DBxrefPFAM:PF00106
ProductL-rhamnose-1-dehydrogenase
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000003.1supercontigACJE01000003.1:229562..231030 +
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