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Sequences
The following sequences are available for this feature:
mRNA from alignment at ACJE01000013.1:1497626..1498934- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >ASPNIDRAFT_126136-T1 ID=ASPNIDRAFT_126136-T1|Name=ASPNIDRAFT_126136-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=1309bp|location=Sequence derived from alignment at ACJE01000013.1:1497626..1498934- (Aspergillus niger ATCC 1015)
GCCGACTGGGCCGACGACGAGGAGTTCGACGACCCCTCCGCTCTCCCCCC
GCAGCAAATCACGACCAACAAAGATGGCACGAAGACGATCGTCTCCTACC
GATTCAACGACGAAGGCAAGAAGGTGAAGGTGACCCGCCGGATCAAAACG
ACCGTTGTGCGCGAACATGTCAACCCGCAGGTCGCGGAGCGGAGGTCCTG
GGCCAAGTTCGGTCTGGAGAAGGGCAACGCGCCCGGACCTTCGTTCGATA
CGACCTCCGTGGGTGAGAACATTGTTTTCCGGCCCAGCGTCAACTGGAAG
CTTCAGGCGGCTGAGGCGGAGAAGAACGGTGGCGAGAAGGGCAGTGTGAA
GGATCAGCTGAAGGACAAGAAGGTCAAGTGTCGTATTTGCAGTGGCGAGC
ACTTTACTGCTCGCTGTCCCTTCAAGGATACTATGGCTCCTGTCGACGAG
CCCACTGCTGGTGGAGAGGCTGGTGATGAGGATTCTCCGGCTGCTGGCGC
TTTGGGTGCTGGTACTTCTAGCTACGTGCCCCCTCATCTGCGGAAGGGTG
CTGCTGGTGGCGGAGAGAGAATGGCTGGCAAGTATGAGAAGGATGATTTG
GCGACTCTGAGAGTTACGAACGTGAGTTTTCCCATCCCCTCCTTGTTTTG
ATTTACTGTTCTGTGTTTGGCTATTTGCTGGTCTCCCCGGAGGGGTTGGG
GGAGGGGTCGAGGGACAGGGGATGCTAGTTTTCCTCTTTCTGTCTCTTTC
TCTCCTCCTTTCCCTTGCCTGCTCTGCCCTCCCTTTGCCCTCTAAACACT
CCTATTGGTGTCGTTCAGAGGGAGAAAGAAAGAGGCAGCAGCCCTTTCGG
GCAGACACATGGATGTCATGAGAACAGCAATCAGCTTCCTCTAATTTCCT
TGCTTCTATTGCATTTGCTTCCCACGGACACATCACTGACTGACAATAAA
CCCAAACAGGTGAGCGAGTTGGCAGAGGAAGGAGAACTGCGGGATCTGTT
CGAACGCTTCGGTCGTGTCACCAGAGTCTTCCTTGCCAGAGACAGAGAAA
CCCAGAGAGCCAAGGGCTTCGCTTTCATCAGCTTTGCGGATCGGAGCGAT
GCTGCACGTGCTTGCGAGAAGATGGATGGCTGTAAGTTATCCCTCCCGGT
TACGTTTCCATTTTTCGTCATATTCTGTTTTGTTTTTTTCCGCCATCGTT
GCAATGTCAGCAGCAAAGCAAGTTATCGGAATCGCAACTAACATTTCCTC
TTCATCTAGTCGGTTACCGTCACCTTATCCTGCGCGTCGAATTCGCCAAG
CGTGCCACT back to topCoding sequence (CDS) from alignment at ACJE01000013.1:1497626..1498934- >ASPNIDRAFT_126136-T1 ID=ASPNIDRAFT_126136-T1|Name=ASPNIDRAFT_126136-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=2529bp|location=Sequence derived from alignment at ACJE01000013.1:1497626..1498934- (Aspergillus niger ATCC 1015)
TCGGTTACCGTCACCTTATCCTGCGCGTCGAATTCGCCAAGCGTGCCACT
GTGAGCGAGTTGGCAGAGGAAGGAGAACTGCGGGATCTGTTCGAACGCTT
CGGTCGTGTCACCAGAGTCTTCCTTGCCAGAGACAGAGAAACCCAGAGAG
CCAAGGGCTTCGCTTTCATCAGCTTTGCGGATCGGAGCGATGCTGCACGT
GCTTGCGAGAAGATGGATGGCTGCCGACTGGGCCGACGACGAGGAGTTCG
ACGACCCCTCCGCTCTCCCCCCGCAGCAAATCACGACCAACAAAGATGGC
ACGAAGACGATCGTCTCCTACCGATTCAACGACGAAGGCAAGAAGGTGAA
GGTGACCCGCCGGATCAAAACGACCGTTGTGCGCGAACATGTCAACCCGC
AGGTCGCGGAGCGGAGGTCCTGGGCCAAGTTCGGTCTGGAGAAGGGCAAC
GCGCCCGGACCTTCGTTCGATACGACCTCCGTGGGTGAGAACATTGTTTT
CCGGCCCAGCGTCAACTGGAAGCTTCAGGCGGCTGAGGCGGAGAAGAACG
GTGGCGAGAAGGGCAGTGTGAAGGATCAGCTGAAGGACAAGAAGGTCAAG
TGTCGTATTTGCAGTGGCGAGCACTTTACTGCTCGCTGTCCCTTCAAGGA
TACTATGGCTCCTGTCGACGAGCCCACTGCTGGTGGAGAGGCTGGTGATG
AGGATTCTCCGGCTGCTGGCGCTTTGGGTGCTGGTACTTCTAGCTACGTG
CCCCCTCATCTGCGGAAGGGTGCTGCTGGTGGCGGAGAGAGAATGGCTGG
CAAGTATGAGAAGGATGATTTGGCGACTCTGAGAGTTACGAACTCGGTTA
CCGTCACCTTATCCTGCGCGTCGAATTCGCCAAGCGTGCCACTGTGAGCG
AGTTGGCAGAGGAAGGAGAACTGCGGGATCTGTTCGAACGCTTCGGTCGT
GTCACCAGAGTCTTCCTTGCCAGAGACAGAGAAACCCAGAGAGCCAAGGG
CTTCGCTTTCATCAGCTTTGCGGATCGGAGCGATGCTGCACGTGCTTGCG
AGAAGATGGATGGCTGCCGACTGGGCCGACGACGAGGAGTTCGACGACCC
CTCCGCTCTCCCCCCGCAGCAAATCACGACCAACAAAGATGGCACGAAGA
CGATCGTCTCCTACCGATTCAACGACGAAGGCAAGAAGGTGAAGGTGACC
CGCCGGATCAAAACGACCGTTGTGCGCGAACATGTCAACCCGCAGGTCGC
GGAGCGGAGGTCCTGGGCCAAGTTCGGTCTGGAGAAGGGCAACGCGCCCG
GACCTTCGTTCGATACGACCTCCGTGGGTGAGAACATTGTTTTCCGGCCC
AGCGTCAACTGGAAGCTTCAGGCGGCTGAGGCGGAGAAGAACGGTGGCGA
GAAGGGCAGTGTGAAGGATCAGCTGAAGGACAAGAAGGTCAAGTGTCGTA
TTTGCAGTGGCGAGCACTTTACTGCTCGCTGTCCCTTCAAGGATACTATG
GCTCCTGTCGACGAGCCCACTGCTGGTGGAGAGGCTGGTGATGAGGATTC
TCCGGCTGCTGGCGCTTTGGGTGCTGGTACTTCTAGCTACGTGCCCCCTC
ATCTGCGGAAGGGTGCTGCTGGTGGCGGAGAGAGAATGGCTGGCAAGTAT
GAGAAGGATGATTTGGCGACTCTGAGAGTTACGAACTCGGTTACCGTCAC
CTTATCCTGCGCGTCGAATTCGCCAAGCGTGCCACTGTGAGCGAGTTGGC
AGAGGAAGGAGAACTGCGGGATCTGTTCGAACGCTTCGGTCGTGTCACCA
GAGTCTTCCTTGCCAGAGACAGAGAAACCCAGAGAGCCAAGGGCTTCGCT
TTCATCAGCTTTGCGGATCGGAGCGATGCTGCACGTGCTTGCGAGAAGAT
GGATGGCTGCCGACTGGGCCGACGACGAGGAGTTCGACGACCCCTCCGCT
CTCCCCCCGCAGCAAATCACGACCAACAAAGATGGCACGAAGACGATCGT
CTCCTACCGATTCAACGACGAAGGCAAGAAGGTGAAGGTGACCCGCCGGA
TCAAAACGACCGTTGTGCGCGAACATGTCAACCCGCAGGTCGCGGAGCGG
AGGTCCTGGGCCAAGTTCGGTCTGGAGAAGGGCAACGCGCCCGGACCTTC
GTTCGATACGACCTCCGTGGGTGAGAACATTGTTTTCCGGCCCAGCGTCA
ACTGGAAGCTTCAGGCGGCTGAGGCGGAGAAGAACGGTGGCGAGAAGGGC
AGTGTGAAGGATCAGCTGAAGGACAAGAAGGTCAAGTGTCGTATTTGCAG
TGGCGAGCACTTTACTGCTCGCTGTCCCTTCAAGGATACTATGGCTCCTG
TCGACGAGCCCACTGCTGGTGGAGAGGCTGGTGATGAGGATTCTCCGGCT
GCTGGCGCTTTGGGTGCTGGTACTTCTAGCTACGTGCCCCCTCATCTGCG
GAAGGGTGCTGCTGGTGGCGGAGAGAGAATGGCTGGCAAGTATGAGAAGG
ATGATTTGGCGACTCTGAGAGTTACGAAC back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005852 | eukaryotic translation initiation factor 3 complex |
| GO:0005737 | cytoplasm |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003743 | translation initiation factor activity |
| GO:0003676 | nucleic acid binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG0926489S |
| DBxref | InterPro:IPR035979 |
| DBxref | InterPro:IPR034240 |
| DBxref | InterPro:IPR017334 |
| DBxref | InterPro:IPR012677 |
| DBxref | InterPro:IPR024675 |
| DBxref | InterPro:IPR000504 |
| DBxref | PFAM:PF00076 |
| DBxref | PFAM:PF12353 |
| Product | translation initiation factor eIF3 subunit g |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ACJE01000013.1 | supercontig | ACJE01000013.1:1497626..1498934 - |
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