You are here

Home

ASPNIDRAFT_126620-T1, ASPNIDRAFT_126620-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_126620-T1
Unique NameASPNIDRAFT_126620-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000003.1:765537..766163-

Legend: CDSpolypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_126620-T1 ID=ASPNIDRAFT_126620-T1|Name=ASPNIDRAFT_126620-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=627bp|location=Sequence derived from alignment at ACJE01000003.1:765537..766163- (Aspergillus niger ATCC 1015)
CGATTTAACCCGGACGAGCTATACCCAAAACACTTCACTTTGAGCGACAT
CGAGGTTCCAGCACACAACATGGTCTTTCTCGCTTGCCCAGGCTCGGAAA
GAAAATGCCCCCACTGCAAACGCCACACGCGTCACCTGGGCTGTATCGTG
ATTGCCATAGATGGAGCGTGCCGCAATAATGGCAGATACGGAGCCCGGGC
GTCAACTGGGGTCTACCACGGCCACGACCATCCCTTAAACGGAAGTGCCA
GTCTTTCCCCCAATCTCAAGCAAACAAGCCAGGTCGCCGAACTCGCGGCC
TGCGAGAGGGCTCTGCTTGGTGCGTACGTCATGCAAAAGTGCTGGGATGG
ATTATCCGAAATGACAGGAGATGGAGAAGAAAGGCTTCACACCGTGGTGA
TCAAGTCAGACTCGGAGTATGTGGTGCGCGGAATGACCGAATGGATCTTC
AAATGGAAAGCCAATGATTGGACTACCGCGAAGGGCTTGCCCGTCGCCAA
TCAAGAGCACTTTAAGAAGATTGATTCTCTTGTCGAATCTCTCGAAAATG
AGCAGGTCCCTGTCCAGTTCTGGCAGGTTCCGAGAGAATTTAACCAGGAG
GCGGATAGGCTGGCAGCGTCTGCTCTG
back to top

Coding sequence (CDS) from alignment at ACJE01000003.1:765537..766163-

>ASPNIDRAFT_126620-T1 ID=ASPNIDRAFT_126620-T1|Name=ASPNIDRAFT_126620-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=627bp|location=Sequence derived from alignment at ACJE01000003.1:765537..766163- (Aspergillus niger ATCC 1015)
CGATTTAACCCGGACGAGCTATACCCAAAACACTTCACTTTGAGCGACAT
CGAGGTTCCAGCACACAACATGGTCTTTCTCGCTTGCCCAGGCTCGGAAA
GAAAATGCCCCCACTGCAAACGCCACACGCGTCACCTGGGCTGTATCGTG
ATTGCCATAGATGGAGCGTGCCGCAATAATGGCAGATACGGAGCCCGGGC
GTCAACTGGGGTCTACCACGGCCACGACCATCCCTTAAACGGAAGTGCCA
GTCTTTCCCCCAATCTCAAGCAAACAAGCCAGGTCGCCGAACTCGCGGCC
TGCGAGAGGGCTCTGCTTGGTGCGTACGTCATGCAAAAGTGCTGGGATGG
ATTATCCGAAATGACAGGAGATGGAGAAGAAAGGCTTCACACCGTGGTGA
TCAAGTCAGACTCGGAGTATGTGGTGCGCGGAATGACCGAATGGATCTTC
AAATGGAAAGCCAATGATTGGACTACCGCGAAGGGCTTGCCCGTCGCCAA
TCAAGAGCACTTTAAGAAGATTGATTCTCTTGTCGAATCTCTCGAAAATG
AGCAGGTCCCTGTCCAGTTCTGGCAGGTTCCGAGAGAATTTAACCAGGAG
GCGGATAGGCTGGCAGCGTCTGCTCTG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0004523RNA-DNA hybrid ribonuclease activity
GO:0003676nucleic acid binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ASPNIDRAFT_126620ASPNIDRAFT_126620Aspergillus niger ATCC 1015gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_126620-T1.cdsASPNIDRAFT_126620-T1.cdsAspergillus niger ATCC 1015CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_126620-T1.exon1ASPNIDRAFT_126620-T1.exon1Aspergillus niger ATCC 1015exon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_126620-T1ASPNIDRAFT_126620-T1-proteinAspergillus niger ATCC 1015polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR012337
DBxrefInterPro:IPR002156
DBxrefInterPro:IPR036397
DBxrefPFAM:PF00075
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000003.1supercontigACJE01000003.1:765537..766163 -
Powered by Drupal