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ASPNIDRAFT_127054-T1, ASPNIDRAFT_127054-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_127054-T1
Unique NameASPNIDRAFT_127054-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000016.1:301171..302055-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_127054-T1 ID=ASPNIDRAFT_127054-T1|Name=ASPNIDRAFT_127054-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=885bp|location=Sequence derived from alignment at ACJE01000016.1:301171..302055- (Aspergillus niger ATCC 1015)
ATGTTCCGTCGTCTAGTAACAGTTGTCCCTCGCTCCGGCGTCCTTTCGCC
TCGCAGCGTCACCCCGGCCGTCTCCGGAATCCAGCAAGCCGTGAGGTCGA
CCGTCGTTGCTCCTCAGCAGCAGCAGCGCAGAGGATACCATGAGAAAGAT
ATGTTTATTCCCCCTCCCCTTTTCATCATGTTGAAAAACCGAAGAAAATG
CTGACCATCCCTGCACTGTTGGACCACTACTCCAACCCAAGTAGGTAGCT
TCCTGCATCCATCCCTCTCGACAACATCACGTCGCATCAAAATATACAAC
ACGCAGCGCTTGCAAATCACGCTCACCAGACATATACGAACAAACGTGAA
AATGAATACTAACGAGCATCCCTGTAGGAAACGTCGGCTCCATGGCCAAG
TCGATGGACGTTGGTACCGGACTCGTCGGCGCCCCGGCCTGTGGCGATGT
CATGAAACTCCAGATCCGCGTCGACAAGGACAGCAACAAGATTAGCGACG
TCAAGTTCAAGACTTTCGGTTGCGGTAGCGCTATTGCCAGCTCGAGTTAT
CTGACTGAGCTGGTCCGTGGAATGACCCTCGACGAGGCCGCTAAGATCCG
TAACACCGATATCGCCAAGGAGTTGTGCTTGCCCCCTGTTAAGCGTATGT
TTATCCCTTGCTACTGTGGAGACGAGAGGATTGGAAGAAATCGGGGGAGA
AATGATAAAGCTAACATATTCTGATAGTGCACTGCTCCATGCTTGCCGAA
GACGCCATCAAGTCCGCCATCTCGGATTACTACACCAAGAACCCTCGCAC
CGTGAAGACCGATCTGTCCGGCACGGGTGCTTCTATCCCGGAAGTGCAGG
TGGAGGTTGAGAAGACCAGCAGCGCAACTGCTTAA
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Coding sequence (CDS) from alignment at ACJE01000016.1:301171..302055-

>ASPNIDRAFT_127054-T1 ID=ASPNIDRAFT_127054-T1|Name=ASPNIDRAFT_127054-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=1764bp|location=Sequence derived from alignment at ACJE01000016.1:301171..302055- (Aspergillus niger ATCC 1015)
TGCACTGCTCCATGCTTGCCGAAGACGCCATCAAGTCCGCCATCTCGGAT
TACTACACCAAGAACCCTCGCACCGTGAAGACCGATCTGTCCGGCACGGG
TGCTTCTATCCCGGAAGTGCAGGTGGAGGTTGAGAAGACCAGCAGCGCAA
CTGCTTAACATCCCTGTAGGAAACGTCGGCTCCATGGCCAAGTCGATGGA
CGTTGGTACCGGACTCGTCGGCGCCCCGGCCTGTGGCGATGTCATGAAAC
TCCAGATCCGCGTCGACAAGGACAGCAACAAGATTAGCGACGTCAAGTTC
AAGACTTTCGGTTGCGGTAGCGCTATTGCCAGCTCGAGTTATCTGACTGA
GCTGGTCCGTGGAATGACCCTCGACGAGGCCGCTAAGATCCGTAACACCG
ATATCGCCAAGGAGTTGTGCTTGCCCCCTGTTAAGCATGTTCCGTCGTCT
AGTAACAGTTGTCCCTCGCTCCGGCGTCCTTTCGCCTCGCAGCGTCACCC
CGGCCGTCTCCGGAATCCAGCAAGCCGTGAGGTCGACCGTCGTTGCTCCT
CAGCAGCAGCAGCGCAGAGGATACCATGAGAAAGATATTGCACTGCTCCA
TGCTTGCCGAAGACGCCATCAAGTCCGCCATCTCGGATTACTACACCAAG
AACCCTCGCACCGTGAAGACCGATCTGTCCGGCACGGGTGCTTCTATCCC
GGAAGTGCAGGTGGAGGTTGAGAAGACCAGCAGCGCAACTGCTTAACATC
CCTGTAGGAAACGTCGGCTCCATGGCCAAGTCGATGGACGTTGGTACCGG
ACTCGTCGGCGCCCCGGCCTGTGGCGATGTCATGAAACTCCAGATCCGCG
TCGACAAGGACAGCAACAAGATTAGCGACGTCAAGTTCAAGACTTTCGGT
TGCGGTAGCGCTATTGCCAGCTCGAGTTATCTGACTGAGCTGGTCCGTGG
AATGACCCTCGACGAGGCCGCTAAGATCCGTAACACCGATATCGCCAAGG
AGTTGTGCTTGCCCCCTGTTAAGCATGTTCCGTCGTCTAGTAACAGTTGT
CCCTCGCTCCGGCGTCCTTTCGCCTCGCAGCGTCACCCCGGCCGTCTCCG
GAATCCAGCAAGCCGTGAGGTCGACCGTCGTTGCTCCTCAGCAGCAGCAG
CGCAGAGGATACCATGAGAAAGATATTGCACTGCTCCATGCTTGCCGAAG
ACGCCATCAAGTCCGCCATCTCGGATTACTACACCAAGAACCCTCGCACC
GTGAAGACCGATCTGTCCGGCACGGGTGCTTCTATCCCGGAAGTGCAGGT
GGAGGTTGAGAAGACCAGCAGCGCAACTGCTTAACATCCCTGTAGGAAAC
GTCGGCTCCATGGCCAAGTCGATGGACGTTGGTACCGGACTCGTCGGCGC
CCCGGCCTGTGGCGATGTCATGAAACTCCAGATCCGCGTCGACAAGGACA
GCAACAAGATTAGCGACGTCAAGTTCAAGACTTTCGGTTGCGGTAGCGCT
ATTGCCAGCTCGAGTTATCTGACTGAGCTGGTCCGTGGAATGACCCTCGA
CGAGGCCGCTAAGATCCGTAACACCGATATCGCCAAGGAGTTGTGCTTGC
CCCCTGTTAAGCATGTTCCGTCGTCTAGTAACAGTTGTCCCTCGCTCCGG
CGTCCTTTCGCCTCGCAGCGTCACCCCGGCCGTCTCCGGAATCCAGCAAG
CCGTGAGGTCGACCGTCGTTGCTCCTCAGCAGCAGCAGCGCAGAGGATAC
CATGAGAAAGATAT
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0016226iron-sulfur cluster assembly
Vocabulary: Molecular Function
TermDefinition
GO:0051536iron-sulfur cluster binding
GO:0005506iron ion binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ISU1ASPNIDRAFT_127054Aspergillus niger ATCC 1015gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_127054-T1ASPNIDRAFT_127054-T1-proteinAspergillus niger ATCC 1015polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_127054-T1.cdsASPNIDRAFT_127054-T1.cdsAspergillus niger ATCC 1015CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_127054-T1.exon3ASPNIDRAFT_127054-T1.exon3Aspergillus niger ATCC 1015exon
ASPNIDRAFT_127054-T1.exon2ASPNIDRAFT_127054-T1.exon2Aspergillus niger ATCC 1015exon
ASPNIDRAFT_127054-T1.exon1ASPNIDRAFT_127054-T1.exon1Aspergillus niger ATCC 1015exon


Properties
Property NameValue
NoteantiSMASH:Cluster_10000161.1
DBxrefInterPro:IPR002871
DBxrefPFAM:PF01592
Productiron-binding protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000016.1supercontigACJE01000016.1:301171..302055 -
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