You are here

Home

ASPNIDRAFT_127436-T1, ASPNIDRAFT_127436-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_127436-T1
Unique NameASPNIDRAFT_127436-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000004.1:1871827..1872661-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_127436-T1 ID=ASPNIDRAFT_127436-T1|Name=ASPNIDRAFT_127436-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=835bp|location=Sequence derived from alignment at ACJE01000004.1:1871827..1872661- (Aspergillus niger ATCC 1015)
ATGCTCTCCGCCGGCGAACGGCCCCAACAACCCGCCATGACCAACGCAGC
CGCAGTAGTAGATTCCACACGCGGTCCCGTCAGCAAAAGCCCATTGACCA
ACTCCGTGGCCAACTCCATGTGGGGAAGCACCAGCAACAACACCACAAGA
AGTACACCTACAGCACCGCAGGCAGAGCAAATCCAACACATCTGGGTAGT
GACGGGGCCAGCGGGATGCGGGAAAAGCACAGTAGGCAAGGCGATTCAAC
AAGCGCTTAACATTCCTTTCTTAGAGGGTGATGATGTACGTCCATACTCT
ATACAACCCCTACCTACATAAATACCATAACCATAACCACCCAGCAAACA
CAAACACACCCAACTAACAAACCACCCACCCTTAGTTCCACACCATCAAC
AACAAAGAAAAAATGTCCAACGGCATCCCCCTCACCGACGCCGACAGATG
GGACTGGCTCATCTCTCTCCGCCAAGCCGCCATCGAGGCGCTCTCCCCCT
CCGAAACCAACAACTTCCACCCGCCCTCCGGCGTAGTGGTTGCTTGTTCA
GCCCTGAAGCAGAAATACCGGGACGTGATGCGCGTCGCGGCGTACGGATC
CCCCTCGGTCCAGATCCATTTCATCTATCTCAAGTTGGACGAGACCATGC
TACTGCAGAGAGTTATGAATCGACAGGCGCATTACATGAAGAGTAGTATG
GTGCAGTCGCAGTTGCAGGATCTGGAGGAACCCAAAGGCGAGTGGGATGC
CCTCACAGTGGATGTGCGTGCTTCGCAGGCGGAAGTGCAGACTGAGGTGT
TGGGGTTGGTGAGGGATACGTTGGCGAGGTATCGC
back to top

Coding sequence (CDS) from alignment at ACJE01000004.1:1871827..1872661-

>ASPNIDRAFT_127436-T1 ID=ASPNIDRAFT_127436-T1|Name=ASPNIDRAFT_127436-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=1470bp|location=Sequence derived from alignment at ACJE01000004.1:1871827..1872661- (Aspergillus niger ATCC 1015)
TTCCACACCATCAACAACAAAGAAAAAATGTCCAACGGCATCCCCCTCAC
CGACGCCGACAGATGGGACTGGCTCATCTCTCTCCGCCAAGCCGCCATCG
AGGCGCTCTCCCCCTCCGAAACCAACAACTTCCACCCGCCCTCCGGCGTA
GTGGTTGCTTGTTCAGCCCTGAAGCAGAAATACCGGGACGTGATGCGCGT
CGCGGCGTACGGATCCCCCTCGGTCCAGATCCATTTCATCTATCTCAAGT
TGGACGAGACCATGCTACTGCAGAGAGTTATGAATCGACAGGCGCATTAC
ATGAAGAGTAGTATGGTGCAGTCGCAGTTGCAGGATCTGGAGGAACCCAA
AGGCGAGTGGGATGCCCTCACAGTGGATGTGCGTGCTTCGCAGGCGGAAG
TGCAGACTGAGGTGTTGGGGTTGGTGAGGGATACGTTGGCGAGGTATCGC
ATGCTCTCCGCCGGCGAACGGCCCCAACAACCCGCCATGACCAACGCAGC
CGCAGTAGTAGATTCCACACGCGGTCCCGTCAGCAAAAGCCCATTGACCA
ACTCCGTGGCCAACTCCATGTGGGGAAGCACCAGCAACAACACCACAAGA
AGTACACCTACAGCACCGCAGGCAGAGCAAATCCAACACATCTGGGTAGT
GACGGGGCCAGCGGGATGCGGGAAAAGCACAGTAGGCAAGGCGATTCAAC
AAGCGCTTAACATTCCTTTCTTAGAGGGTGATGATTTCCACACCATCAAC
AACAAAGAAAAAATGTCCAACGGCATCCCCCTCACCGACGCCGACAGATG
GGACTGGCTCATCTCTCTCCGCCAAGCCGCCATCGAGGCGCTCTCCCCCT
CCGAAACCAACAACTTCCACCCGCCCTCCGGCGTAGTGGTTGCTTGTTCA
GCCCTGAAGCAGAAATACCGGGACGTGATGCGCGTCGCGGCGTACGGATC
CCCCTCGGTCCAGATCCATTTCATCTATCTCAAGTTGGACGAGACCATGC
TACTGCAGAGAGTTATGAATCGACAGGCGCATTACATGAAGAGTAGTATG
GTGCAGTCGCAGTTGCAGGATCTGGAGGAACCCAAAGGCGAGTGGGATGC
CCTCACAGTGGATGTGCGTGCTTCGCAGGCGGAAGTGCAGACTGAGGTGT
TGGGGTTGGTGAGGGATACGTTGGCGAGGTATCGCATGCTCTCCGCCGGC
GAACGGCCCCAACAACCCGCCATGACCAACGCAGCCGCAGTAGTAGATTC
CACACGCGGTCCCGTCAGCAAAAGCCCATTGACCAACTCCGTGGCCAACT
CCATGTGGGGAAGCACCAGCAACAACACCACAAGAAGTACACCTACAGCA
CCGCAGGCAGAGCAAATCCAACACATCTGGGTAGTGACGGGGCCAGCGGG
ATGCGGGAAAAGCACAGTAGGCAAGGCGATTCAACAAGCGCTTAACATTC
CTTTCTTAGAGGGTGATGAT
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0016301kinase activity
Vocabulary: Biological Process
TermDefinition
GO:0005975carbohydrate metabolic process
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ASPNIDRAFT_127436ASPNIDRAFT_127436Aspergillus niger ATCC 1015gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_127436-T1ASPNIDRAFT_127436-T1-proteinAspergillus niger ATCC 1015polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_127436-T1.cdsASPNIDRAFT_127436-T1.cdsAspergillus niger ATCC 1015CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_127436-T1.exon2ASPNIDRAFT_127436-T1.exon2Aspergillus niger ATCC 1015exon
ASPNIDRAFT_127436-T1.exon1ASPNIDRAFT_127436-T1.exon1Aspergillus niger ATCC 1015exon


Properties
Property NameValue
DBxrefInterPro:IPR027417
DBxrefInterPro:IPR031322
DBxrefInterPro:IPR006001
DBxrefPFAM:PF01202
DBxrefPFAM:PF13671
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000004.1supercontigACJE01000004.1:1871827..1872661 -
Powered by Drupal