You are here

Home

ASPNIDRAFT_127827-T1, ASPNIDRAFT_127827-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_127827-T1
Unique NameASPNIDRAFT_127827-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000006.1:1279842..1280267+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_127827-T1 ID=ASPNIDRAFT_127827-T1|Name=ASPNIDRAFT_127827-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=426bp|location=Sequence derived from alignment at ACJE01000006.1:1279842..1280267+ (Aspergillus niger ATCC 1015)
GGCGGTAAGAACCGTCGTCGTGGAAAGAACGAGAACGACAACGAGAAGCG
TGAGCTTGTCTTCAAGGAAGAAGGCCAGGAGTATGCGCAGGTCGTGAAGA
TGCTTGGTAACGGCCGTCTGGAGGCACTTTGCTTCGATGGCGAGAAGCGT
CTGGCTCACATCCGTGGCAAGCTCCGCAAGAAGGTCTGGATCAACCAGGG
CGACATCATCCTTCTCTCGCTGCGTGACTACCAAGACGAAAAGGGCGACG
TCATCATGAAGTACACCGCCGATGAGGCCAGAAGTCTCAAGGCCTACGGC
GAGTTGCCCGAGCACGCCAAGATCAACGAGACCGACACCTACGGCCACGA
GGGCTTCGAGGACAACGTCGAGTTCGACGAGGACCGCGAGAGCGAAGACG
AGAAGGAGATCGATGTCGACGAGCTC
back to top

Coding sequence (CDS) from alignment at ACJE01000006.1:1279842..1280267+

>ASPNIDRAFT_127827-T1 ID=ASPNIDRAFT_127827-T1|Name=ASPNIDRAFT_127827-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=426bp|location=Sequence derived from alignment at ACJE01000006.1:1279842..1280267+ (Aspergillus niger ATCC 1015)
GGCGGTAAGAACCGTCGTCGTGGAAAGAACGAGAACGACAACGAGAAGCG
TGAGCTTGTCTTCAAGGAAGAAGGCCAGGAGTATGCGCAGGTCGTGAAGA
TGCTTGGTAACGGCCGTCTGGAGGCACTTTGCTTCGATGGCGAGAAGCGT
CTGGCTCACATCCGTGGCAAGCTCCGCAAGAAGGTCTGGATCAACCAGGG
CGACATCATCCTTCTCTCGCTGCGTGACTACCAAGACGAAAAGGGCGACG
TCATCATGAAGTACACCGCCGATGAGGCCAGAAGTCTCAAGGCCTACGGC
GAGTTGCCCGAGCACGCCAAGATCAACGAGACCGACACCTACGGCCACGA
GGGCTTCGAGGACAACGTCGAGTTCGACGAGGACCGCGAGAGCGAAGACG
AGAAGGAGATCGATGTCGACGAGCTC
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0006413translational initiation
Vocabulary: Molecular Function
TermDefinition
GO:0003723RNA binding
GO:0003743translation initiation factor activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EIF1AYASPNIDRAFT_127827Aspergillus niger ATCC 1015gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_127827-T1.exon1ASPNIDRAFT_127827-T1.exon1Aspergillus niger ATCC 1015exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_127827-T1.cdsASPNIDRAFT_127827-T1.cdsAspergillus niger ATCC 1015CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_127827-T1ASPNIDRAFT_127827-T1-proteinAspergillus niger ATCC 1015polypeptide


Properties
Property NameValue
NoteBUSCO:EOG092652Y6
DBxrefInterPro:IPR012340
DBxrefInterPro:IPR018104
DBxrefInterPro:IPR006196
DBxrefInterPro:IPR001253
DBxrefPFAM:PF01176
Product Y-chromosomal
ProductEukaryotic translation initiation factor 1A
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000006.1supercontigACJE01000006.1:1279842..1280267 +
Powered by Drupal