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ASPNIDRAFT_127828-T1, ASPNIDRAFT_127828-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_127828-T1
Unique NameASPNIDRAFT_127828-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000020.1:447367..448134+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_127828-T1 ID=ASPNIDRAFT_127828-T1|Name=ASPNIDRAFT_127828-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=768bp|location=Sequence derived from alignment at ACJE01000020.1:447367..448134+ (Aspergillus niger ATCC 1015)
ATGGCCCACTGGAAAGAGGAGTACTCCGCCGCGCTGGCGGCTCGTGATCG
ACGAGAGAAAGCCAGCATAGCTATCTACGATGCTTGTATGTCGATCACCC
TCACTTTCTGGGGTAGTTCACATTCCCGGAAGTATTCTGACCCTTCTCTG
ACTATTATGACCAAAATCATTAGATACCCAACTGGCCGATCGCACGGTTC
ACATAGGAGCAACGGCTAGCAACCCACAGAGATCAGATCCGGTTGAAGCG
CAGCATGTGCCACCCGACACTTCAGCATCCCGCTCCAGCAAAACGCCGAC
AGGAGCAGGCGCACAAGACCCATCTTTACAGGAGACTCTCCTAGCAACAC
GTGCAGACCTGGCAGAGGCACAGCGGTCACGCTCCGAACTGCAGGACCAG
CTCACACGCATGACCACTGACCTAGAGAAGCTGCGGAAGAGAAGCACTCA
GGATAGCAGACGGATCCGCTTATTCGAAACCGAGATTGCTCATCTTCAAC
TACGTTTGAAGGATCGAGATGAAGAGTTGCGTGGGAAGGCAAAGCTACTG
GAGGTTTGCTGCTCCGTTACCTCCTTTTGTGACTCCTTCTGCTGTTGCTG
ACACCACTTTAGGATTTCCAAGACGAGCTGGCATCGTTGAATCTTCAACT
GAATATGGCTGAAGAACGGTCATCCCGACTGCAGAAAGAGAACCAAGATC
TCGTTGATCGCTGGATGGCTAGAATGGGTAGGGAAGCAGAAGCCATGAAC
GCTGCCTCTGAGTTCTCA
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Coding sequence (CDS) from alignment at ACJE01000020.1:447367..448134+

>ASPNIDRAFT_127828-T1 ID=ASPNIDRAFT_127828-T1|Name=ASPNIDRAFT_127828-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=1572bp|location=Sequence derived from alignment at ACJE01000020.1:447367..448134+ (Aspergillus niger ATCC 1015)
ATGGCCCACTGGAAAGAGGAGTACTCCGCCGCGCTGGCGGCTCGTGATCG
ACGAGAGAAAGCCAGCATAGCTATCTACGATGCTTCAACGGCTAGCAACC
CACAGAGATCAGATCCGGTTGAAGCGCAGCATGTGCCACCCGACACTTCA
GCATCCCGCTCCAGCAAAACGCCGACAGGAGCAGGCGCACAAGACCCATC
TTTACAGGAGACTCTCCTAGCAACACGTGCAGACCTGGCAGAGGCACAGC
GGTCACGCTCCGAACTGCAGGACCAGCTCACACGCATGACCACTGACCTA
GAGAAGCTGCGGAAGAGAAGCACTCAGGATAGCAGACGGATCCGCTTATT
CGAAACCGAGATTGCTCATCTTCAACTACACGAGCTGGCATCGTTGAATC
TTCAACTGAATATGGCTGAAGAACGGTCATCCCGACTGCAGAAAGAGAAC
CAAGATCTCGTTGATCGCTGGATGGCTAGAATGGGTAGGGAAGCAGAAGC
CATGAACGCTGCCTCTGAGTTCTCATGGCCCACTGGAAAGAGGAGTACTC
CGCCGCGCTGGCGGCTCGTGATCGACGAGAGAAAGCCAGCATAGCTATCT
ACGATGCTTCAACGGCTAGCAACCCACAGAGATCAGATCCGGTTGAAGCG
CAGCATGTGCCACCCGACACTTCAGCATCCCGCTCCAGCAAAACGCCGAC
AGGAGCAGGCGCACAAGACCCATCTTTACAGGAGACTCTCCTAGCAACAC
GTGCAGACCTGGCAGAGGCACAGCGGTCACGCTCCGAACTGCAGGACCAG
CTCACACGCATGACCACTGACCTAGAGAAGCTGCGGAAGAGAAGCACTCA
GGATAGCAGACGGATCCGCTTATTCGAAACCGAGATTGCTCATCTTCAAC
TACACGAGCTGGCATCGTTGAATCTTCAACTGAATATGGCTGAAGAACGG
TCATCCCGACTGCAGAAAGAGAACCAAGATCTCGTTGATCGCTGGATGGC
TAGAATGGGTAGGGAAGCAGAAGCCATGAACGCTGCCTCTGAGTTCTCAT
GGCCCACTGGAAAGAGGAGTACTCCGCCGCGCTGGCGGCTCGTGATCGAC
GAGAGAAAGCCAGCATAGCTATCTACGATGCTTCAACGGCTAGCAACCCA
CAGAGATCAGATCCGGTTGAAGCGCAGCATGTGCCACCCGACACTTCAGC
ATCCCGCTCCAGCAAAACGCCGACAGGAGCAGGCGCACAAGACCCATCTT
TACAGGAGACTCTCCTAGCAACACGTGCAGACCTGGCAGAGGCACAGCGG
TCACGCTCCGAACTGCAGGACCAGCTCACACGCATGACCACTGACCTAGA
GAAGCTGCGGAAGAGAAGCACTCAGGATAGCAGACGGATCCGCTTATTCG
AAACCGAGATTGCTCATCTTCAACTACACGAGCTGGCATCGTTGAATCTT
CAACTGAATATGGCTGAAGAACGGTCATCCCGACTGCAGAAAGAGAACCA
AGATCTCGTTGATCGCTGGATGGCTAGAATGGGTAGGGAAGCAGAAGCCA
TGAACGCTGCCTCTGAGTTCTC
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATG16ASPNIDRAFT_127828Aspergillus niger ATCC 1015gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_127828-T1.exon1ASPNIDRAFT_127828-T1.exon1Aspergillus niger ATCC 1015exon
ASPNIDRAFT_127828-T1.exon2ASPNIDRAFT_127828-T1.exon2Aspergillus niger ATCC 1015exon
ASPNIDRAFT_127828-T1.exon3ASPNIDRAFT_127828-T1.exon3Aspergillus niger ATCC 1015exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_127828-T1.cdsASPNIDRAFT_127828-T1.cdsAspergillus niger ATCC 1015CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_127828-T1ASPNIDRAFT_127828-T1-proteinAspergillus niger ATCC 1015polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR013923
DBxrefPFAM:PF08614
Product interacts with Atg12p-Atg5p
Productautophagy protein 16
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000020.1supercontigACJE01000020.1:447367..448134 +
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