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ASPNIDRAFT_127917-T1, ASPNIDRAFT_127917-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_127917-T1
Unique NameASPNIDRAFT_127917-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000005.1:849299..850100+

Legend: polypeptideexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_127917-T1 ID=ASPNIDRAFT_127917-T1|Name=ASPNIDRAFT_127917-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=802bp|location=Sequence derived from alignment at ACJE01000005.1:849299..850100+ (Aspergillus niger ATCC 1015)
ATCAGGCACAGGTATCAGGCGAGGTTGGCCAAGCAGCCTATCCTCACTGC
TAGTGTGACGAGTGCTGTAAGAATTCCCATTCTTCTTTCTTACAGATCAT
TCATTCATTTACTGTCGTATTTTCTATTATCTGATGTCAACCCCGACATA
ATACCAATTTGAGCTGACCTTTATTTCCCATGCGGACTAGCTGTTGTTTG
GTAGTGGAGATGTTCTAGCCCAACAACTAGTCGATCGTAAGGGATTTGAT
AAGCACGATCTGGCAAGAACGGGACGCATGGCCCTTTATGGTGGAGGTGA
GCTACCATATAATCCCTTGTCAATCTGGGATCTTCTTTCTGCCCTTGGAA
GTCCTGGGAAAGCCTTCCTCCATACAATGGGAAGTGGTCAAGCTAACATA
TAACAGCGATCTTCGGGCCGGCTGCTACCACCTGGTACGGTGTCCTCCAG
CGTCACGTCGTCCTGAATAACGCCAAAACTACCCTCATTGCCCGTGTCAT
CGCGGATCAATGTGTCTTTACTCCCGCACACCTTACTTGTTTCTTGTCCT
CCATGGCTATCATGGAAGGCACCGATCCGATTGAGAAGTGGCGCAATGGT
TTCGTTCCCAGCTTCAAAGCAAACCTTGCGATTTGGCCTCTCGTTCAAGG
AGTCAACTTTGCCATCGTGCCACTTGAGTACCGCGTGCTTTTTGTCAACC
TAGTCGCTTTGGGTGAGTATTCCGGCCTTCTACTAATATCGAATGATGCT
GACGCCATTAGGCTGGAACTGTTTGTTGAGCTTGATTAACAGCGGTGAGA
AG
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Coding sequence (CDS) from alignment at ACJE01000005.1:849299..850100+

>ASPNIDRAFT_127917-T1 ID=ASPNIDRAFT_127917-T1|Name=ASPNIDRAFT_127917-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=2064bp|location=Sequence derived from alignment at ACJE01000005.1:849299..850100+ (Aspergillus niger ATCC 1015)
ATCAGGCACAGGTATCAGGCGAGGTTGGCCAAGCAGCCTATCCTCACTGC
TAGTGTGACGAGTGCTCTGTTGTTTGGTAGTGGAGATGTTCTAGCCCAAC
AACTAGTCGATCGTAAGGGATTTGATAAGCACGATCTGGCAAGAACGGGA
CGCATGGCCCTTTATGGTGGAGCGATCTTCGGGCCGGCTGCTACCACCTG
GTACGGTGTCCTCCAGCGTCACGTCGTCCTGAATAACGCCAAAACTACCC
TCATTGCCCGTGTCATCGCGGATCAATGTGTCTTTACTCCCGCACACCTT
ACTTGTTTCTTGTCCTCCATGGCTATCATGGAAGGCACCGATCCGATTGA
GAAGTGGCGCAATGGTTTCGTTCCCAGCTTCAAAGCAAACCTTGCGATTT
GGCCTCTCGTTCAAGGAGTCAACTTTGCCATCGTGCCACTTGAGTACCGC
GTGCTTTTTGTCAACCTAGTCGCTTTGGGCTGGAACTGTTTGTTGAGCTT
GATTAACAGCGGTGAGATCAGGCACAGGTATCAGGCGAGGTTGGCCAAGC
AGCCTATCCTCACTGCTAGTGTGACGAGTGCTCTGTTGTTTGGTAGTGGA
GATGTTCTAGCCCAACAACTAGTCGATCGTAAGGGATTTGATAAGCACGA
TCTGGCAAGAACGGGACGCATGGCCCTTTATGGTGGAGCGATCTTCGGGC
CGGCTGCTACCACCTGGTACGGTGTCCTCCAGCGTCACGTCGTCCTGAAT
AACGCCAAAACTACCCTCATTGCCCGTGTCATCGCGGATCAATGTGTCTT
TACTCCCGCACACCTTACTTGTTTCTTGTCCTCCATGGCTATCATGGAAG
GCACCGATCCGATTGAGAAGTGGCGCAATGGTTTCGTTCCCAGCTTCAAA
GCAAACCTTGCGATTTGGCCTCTCGTTCAAGGAGTCAACTTTGCCATCGT
GCCACTTGAGTACCGCGTGCTTTTTGTCAACCTAGTCGCTTTGGGCTGGA
ACTGTTTGTTGAGCTTGATTAACAGCGGTGAGATCAGGCACAGGTATCAG
GCGAGGTTGGCCAAGCAGCCTATCCTCACTGCTAGTGTGACGAGTGCTCT
GTTGTTTGGTAGTGGAGATGTTCTAGCCCAACAACTAGTCGATCGTAAGG
GATTTGATAAGCACGATCTGGCAAGAACGGGACGCATGGCCCTTTATGGT
GGAGCGATCTTCGGGCCGGCTGCTACCACCTGGTACGGTGTCCTCCAGCG
TCACGTCGTCCTGAATAACGCCAAAACTACCCTCATTGCCCGTGTCATCG
CGGATCAATGTGTCTTTACTCCCGCACACCTTACTTGTTTCTTGTCCTCC
ATGGCTATCATGGAAGGCACCGATCCGATTGAGAAGTGGCGCAATGGTTT
CGTTCCCAGCTTCAAAGCAAACCTTGCGATTTGGCCTCTCGTTCAAGGAG
TCAACTTTGCCATCGTGCCACTTGAGTACCGCGTGCTTTTTGTCAACCTA
GTCGCTTTGGGCTGGAACTGTTTGTTGAGCTTGATTAACAGCGGTGAGAT
CAGGCACAGGTATCAGGCGAGGTTGGCCAAGCAGCCTATCCTCACTGCTA
GTGTGACGAGTGCTCTGTTGTTTGGTAGTGGAGATGTTCTAGCCCAACAA
CTAGTCGATCGTAAGGGATTTGATAAGCACGATCTGGCAAGAACGGGACG
CATGGCCCTTTATGGTGGAGCGATCTTCGGGCCGGCTGCTACCACCTGGT
ACGGTGTCCTCCAGCGTCACGTCGTCCTGAATAACGCCAAAACTACCCTC
ATTGCCCGTGTCATCGCGGATCAATGTGTCTTTACTCCCGCACACCTTAC
TTGTTTCTTGTCCTCCATGGCTATCATGGAAGGCACCGATCCGATTGAGA
AGTGGCGCAATGGTTTCGTTCCCAGCTTCAAAGCAAACCTTGCGATTTGG
CCTCTCGTTCAAGGAGTCAACTTTGCCATCGTGCCACTTGAGTACCGCGT
GCTTTTTGTCAACCTAGTCGCTTTGGGCTGGAACTGTTTGTTGAGCTTGA
TTAACAGCGGTGAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
SYM1_2ASPNIDRAFT_127917Aspergillus niger ATCC 1015gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_127917-T1ASPNIDRAFT_127917-T1-proteinAspergillus niger ATCC 1015polypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_127917-T1.exon1ASPNIDRAFT_127917-T1.exon1Aspergillus niger ATCC 1015exon
ASPNIDRAFT_127917-T1.exon2ASPNIDRAFT_127917-T1.exon2Aspergillus niger ATCC 1015exon
ASPNIDRAFT_127917-T1.exon3ASPNIDRAFT_127917-T1.exon3Aspergillus niger ATCC 1015exon
ASPNIDRAFT_127917-T1.exon4ASPNIDRAFT_127917-T1.exon4Aspergillus niger ATCC 1015exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_127917-T1.cdsASPNIDRAFT_127917-T1.cdsAspergillus niger ATCC 1015CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_127917-T1.utr3p1ASPNIDRAFT_127917-T1.utr3p1Aspergillus niger ATCC 1015three_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR007248
DBxrefPFAM:PF04117
ProductProtein required for ethanol metabolism
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000005.1supercontigACJE01000005.1:849299..850100 +
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