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ASPNIDRAFT_128501-T1, ASPNIDRAFT_128501-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_128501-T1
Unique NameASPNIDRAFT_128501-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000020.1:1156805..1157317-

Legend: polypeptideCDSexonthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_128501-T1 ID=ASPNIDRAFT_128501-T1|Name=ASPNIDRAFT_128501-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=513bp|location=Sequence derived from alignment at ACJE01000020.1:1156805..1157317- (Aspergillus niger ATCC 1015)
TGCCCTAATTGCAGCAATGCGCTCACGATTTCTCGTGCGGAGCCGACCAC
AAGGCATCCCTTAGGCGTTAATCGATTCGAGTGTCGCACATGCCCATACC
AATATGCCCTCGACCAGAGCTGGTTTGAGAAGACACCCATGAAACAAAAA
GAAGTGGAGGATGTCTTTGGAGGAAAGGAAGAATTCGCAAATGCGGATAG
CATGGCCAGTAAGTTACGAACTTTGAGGGGCACTCTTCCCTACGGTTGTT
GGAATAAACTTGGGGGCTTGGGGCTAATGTTGTGCTTTCTCTTCCTTTTC
CCCTACCCGCAGCTCAATGCCCCGCAGAAGACTGTAATGGCGACCGCGCA
TACTTTTTCCAGCTGCAGATTCGGAGTGCAGACGAGCCGATGACCACATT
CCTAAAGGTGGGTGCGCACCGGCGGCTTATGCGGTTCTCATGCATCTGGC
CTGACATGCTTTGCTGATTGCGGTTGACAGTGTACCACGTGTGGTGCCCG
ATGGAGAGAGAAC
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Coding sequence (CDS) from alignment at ACJE01000020.1:1156805..1157317-

>ASPNIDRAFT_128501-T1 ID=ASPNIDRAFT_128501-T1|Name=ASPNIDRAFT_128501-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=999bp|location=Sequence derived from alignment at ACJE01000020.1:1156805..1157317- (Aspergillus niger ATCC 1015)
TGTACCACGTGTGGTGCCCGATGGAGAGAGCTCAATGCCCCGCAGAAGAC
TGTAATGGCGACCGCGCATACTTTTTCCAGCTGCAGATTCGGAGTGCAGA
CGAGCCGATGACCACATTCCTAAAGTGCCCTAATTGCAGCAATGCGCTCA
CGATTTCTCGTGCGGAGCCGACCACAAGGCATCCCTTAGGCGTTAATCGA
TTCGAGTGTCGCACATGCCCATACCAATATGCCCTCGACCAGAGCTGGTT
TGAGAAGACACCCATGAAACAAAAAGAAGTGGAGGATGTCTTTGGAGGAA
AGGAAGAATTCGCAAATGCGGATAGCATGGCCATGTACCACGTGTGGTGC
CCGATGGAGAGAGCTCAATGCCCCGCAGAAGACTGTAATGGCGACCGCGC
ATACTTTTTCCAGCTGCAGATTCGGAGTGCAGACGAGCCGATGACCACAT
TCCTAAAGTGCCCTAATTGCAGCAATGCGCTCACGATTTCTCGTGCGGAG
CCGACCACAAGGCATCCCTTAGGCGTTAATCGATTCGAGTGTCGCACATG
CCCATACCAATATGCCCTCGACCAGAGCTGGTTTGAGAAGACACCCATGA
AACAAAAAGAAGTGGAGGATGTCTTTGGAGGAAAGGAAGAATTCGCAAAT
GCGGATAGCATGGCCATGTACCACGTGTGGTGCCCGATGGAGAGAGCTCA
ATGCCCCGCAGAAGACTGTAATGGCGACCGCGCATACTTTTTCCAGCTGC
AGATTCGGAGTGCAGACGAGCCGATGACCACATTCCTAAAGTGCCCTAAT
TGCAGCAATGCGCTCACGATTTCTCGTGCGGAGCCGACCACAAGGCATCC
CTTAGGCGTTAATCGATTCGAGTGTCGCACATGCCCATACCAATATGCCC
TCGACCAGAGCTGGTTTGAGAAGACACCCATGAAACAAAAAGAAGTGGAG
GATGTCTTTGGAGGAAAGGAAGAATTCGCAAATGCGGATAGCATGGCCA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO:0008270zinc ion binding
Vocabulary: Biological Process
TermDefinition
GO:0042779tRNA 3'-trailer cleavage
GO:0006351transcription, DNA-templated
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ASPNIDRAFT_128501ASPNIDRAFT_128501Aspergillus niger ATCC 1015gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_128501-T1ASPNIDRAFT_128501-T1-proteinAspergillus niger ATCC 1015polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_128501-T1.cdsASPNIDRAFT_128501-T1.cdsAspergillus niger ATCC 1015CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_128501-T1.utr3p1ASPNIDRAFT_128501-T1.utr3p1Aspergillus niger ATCC 1015three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_128501-T1.exon3ASPNIDRAFT_128501-T1.exon3Aspergillus niger ATCC 1015exon
ASPNIDRAFT_128501-T1.exon2ASPNIDRAFT_128501-T1.exon2Aspergillus niger ATCC 1015exon
ASPNIDRAFT_128501-T1.exon1ASPNIDRAFT_128501-T1.exon1Aspergillus niger ATCC 1015exon


Properties
Property NameValue
NoteBUSCO:EOG0926539T
DBxrefInterPro:IPR034014
DBxrefInterPro:IPR012164
DBxrefInterPro:IPR001222
DBxrefPFAM:PF01096
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000020.1supercontigACJE01000020.1:1156805..1157317 -
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