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ASPNIDRAFT_130199-T1, ASPNIDRAFT_130199-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_130199-T1
Unique NameASPNIDRAFT_130199-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000010.1:2380750..2382378+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_130199-T1 ID=ASPNIDRAFT_130199-T1|Name=ASPNIDRAFT_130199-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=1629bp|location=Sequence derived from alignment at ACJE01000010.1:2380750..2382378+ (Aspergillus niger ATCC 1015)
CTTATTCATGCCATTGGCGCTGGTGAACGTATCTCCTTGTCTAGATTGGC
CATAACTCATTTGGAGCGCACAGCAAGGCCTATTCGTATTGCTGTGGACA
TCTCGATATGGTTGTTCCAAGTGCAAGCTGGCCGGGGTGGTCGAAATCCG
GAGCTACGGACACTATTCTACAGGCTATTGAAGATTCTGGCGCTTCCAAT
CCATCCTCTTTTTGTATATGATGGCAAGAACAAGCCGCCTTTCAAGAGAG
GCAAAGCCGTGTCAAGTCGCAGTTACGGGAATGCACCAATCATTCGGCTC
TCCAAGATCCTAGTTGATCTGTTCAAATTTCCGCGCCATGAGGCGCCAGG
AGAAGCAGAAGCAGAGTGTGCAAGGCTGCAAAGAGCAGGAGTTGTTGATG
CAGTTATGACCAATGACGTTGACGCTCTAATGTTTGGCTCAACATTCACC
GTCATGGGGTTTTCGAAGGAAAGCGGTAGTAGTACTGGGGCTGCAACACA
TGTTACCTGCTACCGCATGAACACCGCTGGTGATCCTTCAAGTGTGAAGC
TTAATCGTGCAGGCATGATCTTGTTTGCCATGTTAAGTGGCGGTGATTAC
TTACCGTCGGGAGTCCCTAAATGCGGTAGCAAGCTCGCTGGCGAGATTGC
CAAAGCTGGCTTTGGCGCAGATCTTCTGGAAATCCTGGAGTCAGACGGTG
CCGAGCTCGATACGAGACTAAGTGATTGGAGAGAACGACTCCAGTATGAG
TTGGAAGAAAACGAAAGTGGTTACTTCCAGACCAAGCACAAGGTTGTCCG
AATTCCGGATACTTTTCCCGACCGGACAATTTTGTCATATTATGCTAATC
CTGTGGTTTCATCGACCGGCGATATCAAAGCCCTTCAACAATACCTGTCA
AATGCCTGGGACAAGGACATAGACGTTGTCGAGCTGAGGAGATTTGCTGC
CGACGCCTTTGAGTGGAATTACCGCTCTGGGGCTAGGAAAGTGACCAGAT
TACTTTCTGAGCCGCTTCTGTCTTACCGACTACGCCTTGGAAGACAAGCA
TCGGCCTTTCCCGCGAACCGCCCTAGGTTATCAAACTGCGATGTGCCAAT
GCTGCAGAAAATCTATAAGAGCAGGTCCAGCTATAGCACCGATGGCTTAA
CGGAGTATCAACTGGATATGGTTCCCGTCGACGTTGTTGGCTTGGATATT
CTTGCTGATGAGCCAAACCCTCCAATCCCCTCTCAAGAGTCGACAGTCTC
AGGTGACGAGGAAGAGGAATTGGAGGATAACGTGGTATCGGTGCCTCAAT
CTCCGGTCAAAAAACGTGTCATAAAGCGCTATGACCCTTATGTCTCAGAG
AAGGTGTGGGTATTCGAAGCCCTGGCCACTATAGGACTCCCGGAAGTCGT
GGAGAATTGGAAACGAGAGCAAGCTGAGAAGTCGGCACCGAAGAAGACAA
CGACACGAAAGACAGGACCTCGGAAAAAGGGGCCTATAGACCCGAATATG
AAGCGAGGCAGCATTTTGAAATATGGAACCCTCACGAAGGAGCGAACTGA
AATATCCCGCCACAAAAGCGCGCAGCTCTTAGAGGCCGCAGTCTCTGCTA
AAGCAACTGCTGTACCCAGTCTGTCGAGT
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Coding sequence (CDS) from alignment at ACJE01000010.1:2380750..2382378+

>ASPNIDRAFT_130199-T1 ID=ASPNIDRAFT_130199-T1|Name=ASPNIDRAFT_130199-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=1629bp|location=Sequence derived from alignment at ACJE01000010.1:2380750..2382378+ (Aspergillus niger ATCC 1015)
CTTATTCATGCCATTGGCGCTGGTGAACGTATCTCCTTGTCTAGATTGGC
CATAACTCATTTGGAGCGCACAGCAAGGCCTATTCGTATTGCTGTGGACA
TCTCGATATGGTTGTTCCAAGTGCAAGCTGGCCGGGGTGGTCGAAATCCG
GAGCTACGGACACTATTCTACAGGCTATTGAAGATTCTGGCGCTTCCAAT
CCATCCTCTTTTTGTATATGATGGCAAGAACAAGCCGCCTTTCAAGAGAG
GCAAAGCCGTGTCAAGTCGCAGTTACGGGAATGCACCAATCATTCGGCTC
TCCAAGATCCTAGTTGATCTGTTCAAATTTCCGCGCCATGAGGCGCCAGG
AGAAGCAGAAGCAGAGTGTGCAAGGCTGCAAAGAGCAGGAGTTGTTGATG
CAGTTATGACCAATGACGTTGACGCTCTAATGTTTGGCTCAACATTCACC
GTCATGGGGTTTTCGAAGGAAAGCGGTAGTAGTACTGGGGCTGCAACACA
TGTTACCTGCTACCGCATGAACACCGCTGGTGATCCTTCAAGTGTGAAGC
TTAATCGTGCAGGCATGATCTTGTTTGCCATGTTAAGTGGCGGTGATTAC
TTACCGTCGGGAGTCCCTAAATGCGGTAGCAAGCTCGCTGGCGAGATTGC
CAAAGCTGGCTTTGGCGCAGATCTTCTGGAAATCCTGGAGTCAGACGGTG
CCGAGCTCGATACGAGACTAAGTGATTGGAGAGAACGACTCCAGTATGAG
TTGGAAGAAAACGAAAGTGGTTACTTCCAGACCAAGCACAAGGTTGTCCG
AATTCCGGATACTTTTCCCGACCGGACAATTTTGTCATATTATGCTAATC
CTGTGGTTTCATCGACCGGCGATATCAAAGCCCTTCAACAATACCTGTCA
AATGCCTGGGACAAGGACATAGACGTTGTCGAGCTGAGGAGATTTGCTGC
CGACGCCTTTGAGTGGAATTACCGCTCTGGGGCTAGGAAAGTGACCAGAT
TACTTTCTGAGCCGCTTCTGTCTTACCGACTACGCCTTGGAAGACAAGCA
TCGGCCTTTCCCGCGAACCGCCCTAGGTTATCAAACTGCGATGTGCCAAT
GCTGCAGAAAATCTATAAGAGCAGGTCCAGCTATAGCACCGATGGCTTAA
CGGAGTATCAACTGGATATGGTTCCCGTCGACGTTGTTGGCTTGGATATT
CTTGCTGATGAGCCAAACCCTCCAATCCCCTCTCAAGAGTCGACAGTCTC
AGGTGACGAGGAAGAGGAATTGGAGGATAACGTGGTATCGGTGCCTCAAT
CTCCGGTCAAAAAACGTGTCATAAAGCGCTATGACCCTTATGTCTCAGAG
AAGGTGTGGGTATTCGAAGCCCTGGCCACTATAGGACTCCCGGAAGTCGT
GGAGAATTGGAAACGAGAGCAAGCTGAGAAGTCGGCACCGAAGAAGACAA
CGACACGAAAGACAGGACCTCGGAAAAAGGGGCCTATAGACCCGAATATG
AAGCGAGGCAGCATTTTGAAATATGGAACCCTCACGAAGGAGCGAACTGA
AATATCCCGCCACAAAAGCGCGCAGCTCTTAGAGGCCGCAGTCTCTGCTA
AAGCAACTGCTGTACCCAGTCTGTCGAGT
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0006281DNA repair
Vocabulary: Molecular Function
TermDefinition
GO:0008821crossover junction endodeoxyribonuclease activity
GO:0004518nuclease activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ASPNIDRAFT_130199ASPNIDRAFT_130199Aspergillus niger ATCC 1015gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_130199-T1.exon1ASPNIDRAFT_130199-T1.exon1Aspergillus niger ATCC 1015exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_130199-T1.cdsASPNIDRAFT_130199-T1.cdsAspergillus niger ATCC 1015CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_130199-T1ASPNIDRAFT_130199-T1-proteinAspergillus niger ATCC 1015polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR029060
DBxrefInterPro:IPR036279
DBxrefInterPro:IPR037316
DBxrefInterPro:IPR006085
DBxrefInterPro:IPR041177
DBxrefInterPro:IPR006086
DBxrefInterPro:IPR006084
DBxrefPFAM:PF00752
DBxrefPFAM:PF00867
DBxrefPFAM:PF18380
Product5'-3' exonuclease
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000010.1supercontigACJE01000010.1:2380750..2382378 +
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