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Sequences
The following sequences are available for this feature:
mRNA from alignment at ACJE01000004.1:1533934..1536177+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >ASPNIDRAFT_130523-T1 ID=ASPNIDRAFT_130523-T1|Name=ASPNIDRAFT_130523-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=2244bp|location=Sequence derived from alignment at ACJE01000004.1:1533934..1536177+ (Aspergillus niger ATCC 1015)
GATACGGGATCGAAGCCATTCATCTGCAAAGAATGTCGGCGACCTTTTGC
CCGCCAGGACGCTCTGACCCGTCATGAAAAGCTTCACACCCGCGCGGCCA
ATGCCAAACAGGCCCAAGTGCAGCAATCATCCGTACACTTTCCTCCGCAG
ACGACATCTTTGGATGCTCTGCCCTGGGATGCCAGTCGCGCCCCCGCGCC
ACCCATAGTTCCTACCTCTGCATCTAATCAGGCATGGGAGACGTCCCAAG
CTGAGCAGCATCCGGGCCTGCAACATGCAGCTTCCGATCTCGATTTCTCC
CTGATTTGGCCTGACTCAGAGAATCTATTCCAAAGTATCATGTCATCCGA
TGCCACCGACCAATGGCAGATGCCATTAGGGGCTTTGCCCTTCCCGCCAG
TGGTACAAGATGTTAATGGGATGAATTTCGGGTCACCGAATTCGTTTGAC
GACAGAGGGTCGTCAATAGGCACTATTCCCTCAGGTGGAAGCCACCAGGC
CGTGCGGGACGTTACCGAGATGGTGACTAGTTCGGTGGGTGTTCCCCAGG
CTTCTTGGTTTAAGTACCCGTTACTGATACTCTCAAAATTACTAGTCGTC
AAGTGTCACAGCTGCAATCAAGGCGACATCGATAACATCAGTCTTTTTAG
ATGAATGTCTGCACATGTTCTTCGTGCGGTTCATCCCCACGTTTCCAGTC
CTACATCGAGCAACTTTCGTGTTCCGCGAGTGTACCCATCCCCTCCTTCT
CAATGCTATGGCATTGGGATCGTTGTACTTGGGCCCAAAAGATTCTGTAG
CCAAGGGAGAGGCTTTATGGCGCTTAGCACATACTGCTATTGCAACCTCT
GTAAGTACGGTAGGCGCACGCTCCGGTACAGCTATGCTTACATTGGTCTA
GTGGCAATCAATGATCACACATCGAGGGCCTCACGATGCCTGCAAGGGTG
TGCAGCTCCTCATTACAGCTCTTCTTGGCCAGATATACGGTGCTTTATCC
AAGGTGAGTTAGACTTGCGAGGTTCACTCTCCCCATCAATACTAACCGGC
TTCCTATTATAGAACCGGGTTATCCGCACGACAAGTCAAGTCTTCCATCC
GCTCGGCTTTCTTTGGGCAAGACACTGTGGGATGCTGGATGCCGACCCTT
TTCCAATTGAAAATGTGCCTTATCCAAACGCTCCCAGCACGGAAAAGGAG
TACAAGTGGCGCACGTGGGCAGCTCGAGAGATACAACAACGCGCGTTACT
CGCTTATCATATATTAGATGGCCTCGTTGCGCAGATGTCGGGTGACAGTG
CATCTACCCGGCATGTTGCCAACCCTCTGCATCTCCCCAGCAGCGAAGCT
GCCTTCGATGCCGGTAATGTCGATGAATGGATTGCTATCATGCGCGCTCA
GAAGGTGGAGCAACCATCCTTCCGGTTGGTGTTCCGCTCCCTTTTCCCTC
CCATCGGGAGCTTTCGGCCTCTTGACTTCCAATTCTCTGCCTTTGCATTA
CGCGTTGTCCTAGAAGGTCTCCAGTCTCTTGTTTCGGATTCAGACGAAAG
AGATCTTGCTGCCGTGGGGGTTCCCGGCCGTTCTGATGTCCGGAGAGCAT
TGGCTCAAGTGCATGAGACTATTACTATGAGTATCCATCTCTCTGCACCA
GAACGTCTTGAGGTTCTTCTGCGTTGGCATACGATATGTCTCGACACCAT
GATCAACTCCACGGTCCTCTGCAGGCATGTTTGTTCTCGATATGACATCA
CTCAGCATGTTTCCGGAGGTTCTCGGACCATCAAGCCAGGATTCGACATG
GCCAAATGGGTCAATACCGAGGACGCTCGTCGTGCTTTACTGCACGCTAT
TGCAATCCAAGACATTGTCGAACAACTACCCAGAGGCAGGGCCCATGTCA
TCCACATGCCAAGCTCTTTATTCTCGGCTACAACGATATACGTTGTCTTC
TCCCTCGCTGGTGTGGCAAATATCCACCTTCCACGCACGATTGTCTGGCA
GGATGCCCTTCTTTCGCGCGCTGATTTGAACCTTGGTTGCGAGAACATTC
GCCCCTCGACTGGCTCTGAAACACGGCGCTTTGTTGAAGAGGGACGTACT
GACTCCCCCCCTGGCATGGGAGCGGTGCGCAATCTGTTGTATGAAATGAA
CTCGCTGCAGAAGTTGTTCCGCTGCATGTTCTCCCAATGGGGCATTGCAC
ATGACATGGAGGAAATTATTGATCAGTGGATTACCCTTTGCCAC back to topCoding sequence (CDS) from alignment at ACJE01000004.1:1533934..1536177+ >ASPNIDRAFT_130523-T1 ID=ASPNIDRAFT_130523-T1|Name=ASPNIDRAFT_130523-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=8076bp|location=Sequence derived from alignment at ACJE01000004.1:1533934..1536177+ (Aspergillus niger ATCC 1015)
GATACGGGATCGAAGCCATTCATCTGCAAAGAATGTCGGCGACCTTTTGC
CCGCCAGGACGCTCTGACCCGTCATGAAAAGCTTCACACCCGCGCGGCCA
ATGCCAAACAGGCCCAAGTGCAGCAATCATCCGTACACTTTCCTCCGCAG
ACGACATCTTTGGATGCTCTGCCCTGGGATGCCAGTCGCGCCCCCGCGCC
ACCCATAGTTCCTACCTCTGCATCTAATCAGGCATGGGAGACGTCCCAAG
CTGAGCAGCATCCGGGCCTGCAACATGCAGCTTCCGATCTCGATTTCTCC
CTGATTTGGCCTGACTCAGAGAATCTATTCCAAAGTATCATGTCATCCGA
TGCCACCGACCAATGGCAGATGCCATTAGGGGCTTTGCCCTTCCCGCCAG
TGGTACAAGATGTTAATGGGATGAATTTCGGGTCACCGAATTCGTTTGAC
GACAGAGGGTCGTCAATAGGCACTATTCCCTCAGGTGGAAGCCACCAGGC
CGTGCGGGACGTTACCGAGATGGTGACTAGTTCGTCGTCAAGTGTCACAG
CTGCAATCAAGGCGACATCGATAACATCAGTCTTTTTAGATGAATGTCTG
CACATGTTCTTCGTGCGGTTCATCCCCACGTTTCCAGTCCTACATCGAGC
AACTTTCGTGTTCCGCGAGTGTACCCATCCCCTCCTTCTCAATGCTATGG
CATTGGGATCGTTGTACTTGGGCCCAAAAGATTCTTGGCAATCAATGATC
ACACATCGAGGGCCTCACGATGCCTGCAAGGGTGTGCAGCTCCTCATTAC
AGCTCTTCTTGGCCAGATATACGGTGCTTTATCCAAGAACCGGGTTATCC
GCACGACAAGTCAAGTCTTCCATCCGCTCGGCTTTCTTTGGGCAAGACAC
TGTGGGATGCTGGATGCCGACCCTTTTCCAATTGAAAATGTGCCTTATCC
AAACGCTCCCAGCACGGAAAAGGAGTACAAGTGGCGCACGTGGGCAGCTC
GAGAGATACAACAACGCGCGTTACTCGCTTATCATATATTAGATGGCCTC
GTTGCGCAGATGTCGGGTGACAGTGCATCTACCCGGCATGTTGCCAACCC
TCTGCATCTCCCCAGCAGCGAAGCTGCCTTCGATGCCGGTAATGTCGATG
AATGGATTGCTATCATGCGCGCTCAGAAGGTGGAGCAACCATCCTTCCGG
TTGGTGTTCCGCTCCCTTTTCCCTCCCATCGGGAGCTTTCGGCCTCTTGA
CTTCCAATTCTCTGCCTTTGCATTACGCGTTGTCCTAGAAGGTCTCCAGT
CTCTTGTTTCGGATTCAGACGAAAGAGATCTTGCTGCCGTGGGGGTTCCC
GGCCGTTCTGATGTCCGGAGAGCATTGGCTCAAGTGCATGAGACTATTAC
TATGAGTATCCATCTCTCTGCACCAGAACGTCTTGAGGTTCTTCTGCGTT
GGCATACGATATGTCTCGACACCATGATCAACTCCACGGTCCTCTGCAGG
CATGTTTGTTCTCGATATGACATCACTCAGCATGTTTCCGGAGGTTCTCG
GACCATCAAGCCAGGATTCGACATGGCCAAATGGGTCAATACCGAGGACG
CTCGTCGTGCTTTACTGCACGCTATTGCAATCCAAGACATTGTCGAACAA
CTACCCAGAGGCAGGGCCCATGTCATCCACATGCCAAGCTCTTTATTCTC
GGCTACAACGATATACGTTGTCTTCTCCCTCGCTGGTGTGGCAAATATCC
ACCTTCCACGCACGATTGTCTGGCAGGATGCCCTTCTTTCGCGCGCTGAT
TTGAACCTTGGTTGCGAGAACATTCGCCCCTCGACTGGCTCTGAAACACG
GCGCTTTGTTGAAGAGGGACGTACTGACTCCCCCCCTGGCATGGGAGCGG
TGCGCAATCTGTTGTATGAAATGAACTCGCTGCAGAAGTTGTTCCGCTGC
ATGTTCTCCCAATGGGGCATTGCACATGACATGGAGGAAATTATTGATCA
GTGGATTACCCTTTGCCACGATACGGGATCGAAGCCATTCATCTGCAAAG
AATGTCGGCGACCTTTTGCCCGCCAGGACGCTCTGACCCGTCATGAAAAG
CTTCACACCCGCGCGGCCAATGCCAAACAGGCCCAAGTGCAGCAATCATC
CGTACACTTTCCTCCGCAGACGACATCTTTGGATGCTCTGCCCTGGGATG
CCAGTCGCGCCCCCGCGCCACCCATAGTTCCTACCTCTGCATCTAATCAG
GCATGGGAGACGTCCCAAGCTGAGCAGCATCCGGGCCTGCAACATGCAGC
TTCCGATCTCGATTTCTCCCTGATTTGGCCTGACTCAGAGAATCTATTCC
AAAGTATCATGTCATCCGATGCCACCGACCAATGGCAGATGCCATTAGGG
GCTTTGCCCTTCCCGCCAGTGGTACAAGATGTTAATGGGATGAATTTCGG
GTCACCGAATTCGTTTGACGACAGAGGGTCGTCAATAGGCACTATTCCCT
CAGGTGGAAGCCACCAGGCCGTGCGGGACGTTACCGAGATGGTGACTAGT
TCGTCGTCAAGTGTCACAGCTGCAATCAAGGCGACATCGATAACATCAGT
CTTTTTAGATGAATGTCTGCACATGTTCTTCGTGCGGTTCATCCCCACGT
TTCCAGTCCTACATCGAGCAACTTTCGTGTTCCGCGAGTGTACCCATCCC
CTCCTTCTCAATGCTATGGCATTGGGATCGTTGTACTTGGGCCCAAAAGA
TTCTTGGCAATCAATGATCACACATCGAGGGCCTCACGATGCCTGCAAGG
GTGTGCAGCTCCTCATTACAGCTCTTCTTGGCCAGATATACGGTGCTTTA
TCCAAGAACCGGGTTATCCGCACGACAAGTCAAGTCTTCCATCCGCTCGG
CTTTCTTTGGGCAAGACACTGTGGGATGCTGGATGCCGACCCTTTTCCAA
TTGAAAATGTGCCTTATCCAAACGCTCCCAGCACGGAAAAGGAGTACAAG
TGGCGCACGTGGGCAGCTCGAGAGATACAACAACGCGCGTTACTCGCTTA
TCATATATTAGATGGCCTCGTTGCGCAGATGTCGGGTGACAGTGCATCTA
CCCGGCATGTTGCCAACCCTCTGCATCTCCCCAGCAGCGAAGCTGCCTTC
GATGCCGGTAATGTCGATGAATGGATTGCTATCATGCGCGCTCAGAAGGT
GGAGCAACCATCCTTCCGGTTGGTGTTCCGCTCCCTTTTCCCTCCCATCG
GGAGCTTTCGGCCTCTTGACTTCCAATTCTCTGCCTTTGCATTACGCGTT
GTCCTAGAAGGTCTCCAGTCTCTTGTTTCGGATTCAGACGAAAGAGATCT
TGCTGCCGTGGGGGTTCCCGGCCGTTCTGATGTCCGGAGAGCATTGGCTC
AAGTGCATGAGACTATTACTATGAGTATCCATCTCTCTGCACCAGAACGT
CTTGAGGTTCTTCTGCGTTGGCATACGATATGTCTCGACACCATGATCAA
CTCCACGGTCCTCTGCAGGCATGTTTGTTCTCGATATGACATCACTCAGC
ATGTTTCCGGAGGTTCTCGGACCATCAAGCCAGGATTCGACATGGCCAAA
TGGGTCAATACCGAGGACGCTCGTCGTGCTTTACTGCACGCTATTGCAAT
CCAAGACATTGTCGAACAACTACCCAGAGGCAGGGCCCATGTCATCCACA
TGCCAAGCTCTTTATTCTCGGCTACAACGATATACGTTGTCTTCTCCCTC
GCTGGTGTGGCAAATATCCACCTTCCACGCACGATTGTCTGGCAGGATGC
CCTTCTTTCGCGCGCTGATTTGAACCTTGGTTGCGAGAACATTCGCCCCT
CGACTGGCTCTGAAACACGGCGCTTTGTTGAAGAGGGACGTACTGACTCC
CCCCCTGGCATGGGAGCGGTGCGCAATCTGTTGTATGAAATGAACTCGCT
GCAGAAGTTGTTCCGCTGCATGTTCTCCCAATGGGGCATTGCACATGACA
TGGAGGAAATTATTGATCAGTGGATTACCCTTTGCCACGATACGGGATCG
AAGCCATTCATCTGCAAAGAATGTCGGCGACCTTTTGCCCGCCAGGACGC
TCTGACCCGTCATGAAAAGCTTCACACCCGCGCGGCCAATGCCAAACAGG
CCCAAGTGCAGCAATCATCCGTACACTTTCCTCCGCAGACGACATCTTTG
GATGCTCTGCCCTGGGATGCCAGTCGCGCCCCCGCGCCACCCATAGTTCC
TACCTCTGCATCTAATCAGGCATGGGAGACGTCCCAAGCTGAGCAGCATC
CGGGCCTGCAACATGCAGCTTCCGATCTCGATTTCTCCCTGATTTGGCCT
GACTCAGAGAATCTATTCCAAAGTATCATGTCATCCGATGCCACCGACCA
ATGGCAGATGCCATTAGGGGCTTTGCCCTTCCCGCCAGTGGTACAAGATG
TTAATGGGATGAATTTCGGGTCACCGAATTCGTTTGACGACAGAGGGTCG
TCAATAGGCACTATTCCCTCAGGTGGAAGCCACCAGGCCGTGCGGGACGT
TACCGAGATGGTGACTAGTTCGTCGTCAAGTGTCACAGCTGCAATCAAGG
CGACATCGATAACATCAGTCTTTTTAGATGAATGTCTGCACATGTTCTTC
GTGCGGTTCATCCCCACGTTTCCAGTCCTACATCGAGCAACTTTCGTGTT
CCGCGAGTGTACCCATCCCCTCCTTCTCAATGCTATGGCATTGGGATCGT
TGTACTTGGGCCCAAAAGATTCTTGGCAATCAATGATCACACATCGAGGG
CCTCACGATGCCTGCAAGGGTGTGCAGCTCCTCATTACAGCTCTTCTTGG
CCAGATATACGGTGCTTTATCCAAGAACCGGGTTATCCGCACGACAAGTC
AAGTCTTCCATCCGCTCGGCTTTCTTTGGGCAAGACACTGTGGGATGCTG
GATGCCGACCCTTTTCCAATTGAAAATGTGCCTTATCCAAACGCTCCCAG
CACGGAAAAGGAGTACAAGTGGCGCACGTGGGCAGCTCGAGAGATACAAC
AACGCGCGTTACTCGCTTATCATATATTAGATGGCCTCGTTGCGCAGATG
TCGGGTGACAGTGCATCTACCCGGCATGTTGCCAACCCTCTGCATCTCCC
CAGCAGCGAAGCTGCCTTCGATGCCGGTAATGTCGATGAATGGATTGCTA
TCATGCGCGCTCAGAAGGTGGAGCAACCATCCTTCCGGTTGGTGTTCCGC
TCCCTTTTCCCTCCCATCGGGAGCTTTCGGCCTCTTGACTTCCAATTCTC
TGCCTTTGCATTACGCGTTGTCCTAGAAGGTCTCCAGTCTCTTGTTTCGG
ATTCAGACGAAAGAGATCTTGCTGCCGTGGGGGTTCCCGGCCGTTCTGAT
GTCCGGAGAGCATTGGCTCAAGTGCATGAGACTATTACTATGAGTATCCA
TCTCTCTGCACCAGAACGTCTTGAGGTTCTTCTGCGTTGGCATACGATAT
GTCTCGACACCATGATCAACTCCACGGTCCTCTGCAGGCATGTTTGTTCT
CGATATGACATCACTCAGCATGTTTCCGGAGGTTCTCGGACCATCAAGCC
AGGATTCGACATGGCCAAATGGGTCAATACCGAGGACGCTCGTCGTGCTT
TACTGCACGCTATTGCAATCCAAGACATTGTCGAACAACTACCCAGAGGC
AGGGCCCATGTCATCCACATGCCAAGCTCTTTATTCTCGGCTACAACGAT
ATACGTTGTCTTCTCCCTCGCTGGTGTGGCAAATATCCACCTTCCACGCA
CGATTGTCTGGCAGGATGCCCTTCTTTCGCGCGCTGATTTGAACCTTGGT
TGCGAGAACATTCGCCCCTCGACTGGCTCTGAAACACGGCGCTTTGTTGA
AGAGGGACGTACTGACTCCCCCCCTGGCATGGGAGCGGTGCGCAATCTGT
TGTATGAAATGAACTCGCTGCAGAAGTTGTTCCGCTGCATGTTCTCCCAA
TGGGGCATTGCACATGACATGGAGGAAATTATTGATCAGTGGATTACCCT
TTGCCACGATACGGGATCGAAGCCATTCATCTGCAAAGAATGTCGGCGAC
CTTTTGCCCGCCAGGACGCTCTGACCCGTCATGAAAAGCTTCACACCCGC
GCGGCCAATGCCAAACAGGCCCAAGTGCAGCAATCATCCGTACACTTTCC
TCCGCAGACGACATCTTTGGATGCTCTGCCCTGGGATGCCAGTCGCGCCC
CCGCGCCACCCATAGTTCCTACCTCTGCATCTAATCAGGCATGGGAGACG
TCCCAAGCTGAGCAGCATCCGGGCCTGCAACATGCAGCTTCCGATCTCGA
TTTCTCCCTGATTTGGCCTGACTCAGAGAATCTATTCCAAAGTATCATGT
CATCCGATGCCACCGACCAATGGCAGATGCCATTAGGGGCTTTGCCCTTC
CCGCCAGTGGTACAAGATGTTAATGGGATGAATTTCGGGTCACCGAATTC
GTTTGACGACAGAGGGTCGTCAATAGGCACTATTCCCTCAGGTGGAAGCC
ACCAGGCCGTGCGGGACGTTACCGAGATGGTGACTAGTTCGTCGTCAAGT
GTCACAGCTGCAATCAAGGCGACATCGATAACATCAGTCTTTTTAGATGA
ATGTCTGCACATGTTCTTCGTGCGGTTCATCCCCACGTTTCCAGTCCTAC
ATCGAGCAACTTTCGTGTTCCGCGAGTGTACCCATCCCCTCCTTCTCAAT
GCTATGGCATTGGGATCGTTGTACTTGGGCCCAAAAGATTCTTGGCAATC
AATGATCACACATCGAGGGCCTCACGATGCCTGCAAGGGTGTGCAGCTCC
TCATTACAGCTCTTCTTGGCCAGATATACGGTGCTTTATCCAAGAACCGG
GTTATCCGCACGACAAGTCAAGTCTTCCATCCGCTCGGCTTTCTTTGGGC
AAGACACTGTGGGATGCTGGATGCCGACCCTTTTCCAATTGAAAATGTGC
CTTATCCAAACGCTCCCAGCACGGAAAAGGAGTACAAGTGGCGCACGTGG
GCAGCTCGAGAGATACAACAACGCGCGTTACTCGCTTATCATATATTAGA
TGGCCTCGTTGCGCAGATGTCGGGTGACAGTGCATCTACCCGGCATGTTG
CCAACCCTCTGCATCTCCCCAGCAGCGAAGCTGCCTTCGATGCCGGTAAT
GTCGATGAATGGATTGCTATCATGCGCGCTCAGAAGGTGGAGCAACCATC
CTTCCGGTTGGTGTTCCGCTCCCTTTTCCCTCCCATCGGGAGCTTTCGGC
CTCTTGACTTCCAATTCTCTGCCTTTGCATTACGCGTTGTCCTAGAAGGT
CTCCAGTCTCTTGTTTCGGATTCAGACGAAAGAGATCTTGCTGCCGTGGG
GGTTCCCGGCCGTTCTGATGTCCGGAGAGCATTGGCTCAAGTGCATGAGA
CTATTACTATGAGTATCCATCTCTCTGCACCAGAACGTCTTGAGGTTCTT
CTGCGTTGGCATACGATATGTCTCGACACCATGATCAACTCCACGGTCCT
CTGCAGGCATGTTTGTTCTCGATATGACATCACTCAGCATGTTTCCGGAG
GTTCTCGGACCATCAAGCCAGGATTCGACATGGCCAAATGGGTCAATACC
GAGGACGCTCGTCGTGCTTTACTGCACGCTATTGCAATCCAAGACATTGT
CGAACAACTACCCAGAGGCAGGGCCCATGTCATCCACATGCCAAGCTCTT
TATTCTCGGCTACAACGATATACGTTGTCTTCTCCCTCGCTGGTGTGGCA
AATATCCACCTTCCACGCACGATTGTCTGGCAGGATGCCCTTCTTTCGCG
CGCTGATTTGAACCTTGGTTGCGAGAACATTCGCCCCTCGACTGGCTCTG
AAACACGGCGCTTTGTTGAAGAGGGACGTACTGACTCCCCCCCTGGCATG
GGAGCGGTGCGCAATCTGTTGTATGAAATGAACTCGCTGCAGAAGTTGTT
CCGCTGCATGTTCTCCCAATGGGGCATTGCACATGACATGGAGGAAATTA
TTGATCAGTGGATTACCCTTTGCCAC back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005634 | nucleus |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006351 | transcription, DNA-templated |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003676 | nucleic acid binding |
| GO:0003677 | DNA binding |
| GO:0008270 | zinc ion binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | EggNog:ENOG41 |
| DBxref | InterPro:IPR036236 |
| DBxref | InterPro:IPR013087 |
| DBxref | InterPro:IPR007219 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ACJE01000004.1 | supercontig | ACJE01000004.1:1533934..1536177 + |
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