You are here

Home

ASPNIDRAFT_130791-T1, ASPNIDRAFT_130791-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_130791-T1
Unique NameASPNIDRAFT_130791-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000019.1:1607309..1608783-

Legend: polypeptideCDSexonthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_130791-T1 ID=ASPNIDRAFT_130791-T1|Name=ASPNIDRAFT_130791-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=1475bp|location=Sequence derived from alignment at ACJE01000019.1:1607309..1608783- (Aspergillus niger ATCC 1015)
TTGGCCGCGGGCTGCCGCTTTCCATGTCTCGAGCCCCTCCTTCCTCATCT
GAAGAGTGTCTTGAGCCCAGAAGACGCTTGCAGTCTGCTCGAAATCTTCT
TTACCGAGCCCGGTGAGTCCGCCGGATCCTCCCATAGCCCCTACGTTCTC
TCCCCCGTGCTTCGAAGATCCGCGGTCTTGGATCCGATCAAGCCGCGGCC
GACCTCTCCAGCGCTTCTGGCAACAATGCTTTGGTGTGCAGCGCACACGG
CAAATGGGAGACTGTACTATATCCCAGGATCGCGGGCACGAATCGTTGAT
CACCTTTACTGCCTGGTGATGTCCTTACTGCAGCGCCTGGACCCGGATAA
TTGGCGTCGCGTAAACGGTAAGTGTATATCTGCACCCTCCCATCAACCCC
GGGTGATGAAAGTATCCAGTAGGCAAGCGGCCAATAATTGGAGTTAGGGG
GCTGGCAGTTGGAAAACGACTGTGTCTCCGCCCTTGATGCTGGAGACCCA
GACCGCGCTCGCAGGACTTTCGGGACTGGCCCTACCCCTACGGTAGACGA
TGTCCTCACGTTCGTCATCCTGACTATCGTTATTTCCGGTGGCGAATACA
AGTCAGACTGCTTGAAGTGGTGGAACAAAGCACTTCGCTTGATCAAGCAT
TTTGGGTTTCACCAGGACCCCTTGCGGACTGGCCAGCCGAAACGGGGATC
ACTTCAGATCATCGAAGAACAAGAAGAACAACGGCGGGCTTTCTGGTTGG
TCTATGCCTTGGATCGGCACTTGGCCGTATCTCACAATCGTGCCGTTTAT
CTCCTCGACGCCGAATGTAAAGTGCTTACGCCCCTACCAGAATCTTGCTG
GCAGAGGCTGCATGCCTTTACAGCTGACACCCTGCCCTCGAGGACCTACG
GCCCGCCAACTGTCATTTCGGGAACTGGGCTCTTTGAGTACTTCCTCCCC
TTGATGTCTATTTTGGGGGATATTATCGAGTTTCGTCTGTGGCGCCACCA
TCCGCGACTGAAATTCGACGAGCATGCCGTGGTAAGGGACATCGATATTG
CACTTACCAATTGTCATCAGAGTGTTTCAGAATGGCTTCGCGAGGTAGGT
CAGACTGCAAACGCCTCGCGACCTTCCTCGACGACTCCACGTGCCGAGGT
GACAATGGCATACGCCTCATATATTATCAAGGTTCTCTTTGTAATGCTGT
ATGGGGAATGGGATGCCACCAGTATGCTGGAAAACCATGGGGACTGGATC
ACCTCCGCACAATTCTCTGAGTGCGCCTCTCATTCAATCGCTGCAGCCCA
GCAAATCTCCTATGTCCTCTCGATCGATCCCGAACTGTCGTTCATGCCCT
ACCTGGTGGGGATTTATCTTTTCCACGGCAGTCTCGTGCTTCTTTTGTTT
GCTGAGCGAATGCCTCTCGTTGGCCCGAACCCGTCGGTGGAGGAAGCCTG
TGAAGTAATCATCCGCGCGCATGAA
back to top

Coding sequence (CDS) from alignment at ACJE01000019.1:1607309..1608783-

>ASPNIDRAFT_130791-T1 ID=ASPNIDRAFT_130791-T1|Name=ASPNIDRAFT_130791-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=2786bp|location=Sequence derived from alignment at ACJE01000019.1:1607309..1608783- (Aspergillus niger ATCC 1015)
GGGGCTGGCAGTTGGAAAACGACTGTGTCTCCGCCCTTGATGCTGGAGAC
CCAGACCGCGCTCGCAGGACTTTCGGGACTGGCCCTACCCCTACGGTAGA
CGATGTCCTCACGTTCGTCATCCTGACTATCGTTATTTCCGGTGGCGAAT
ACAAGTCAGACTGCTTGAAGTGGTGGAACAAAGCACTTCGCTTGATCAAG
CATTTTGGGTTTCACCAGGACCCCTTGCGGACTGGCCAGCCGAAACGGGG
ATCACTTCAGATCATCGAAGAACAAGAAGAACAACGGCGGGCTTTCTGGT
TGGTCTATGCCTTGGATCGGCACTTGGCCGTATCTCACAATCGTGCCGTT
TATCTCCTCGACGCCGAATGTAAAGTGCTTACGCCCCTACCAGAATCTTG
CTGGCAGAGGCTGCATGCCTTTACAGCTGACACCCTGCCCTCGAGGACCT
ACGGCCCGCCAACTGTCATTTCGGGAACTGGGCTCTTTGAGTACTTCCTC
CCCTTGATGTCTATTTTGGGGGATATTATCGAGTTTCGTCTGTGGCGCCA
CCATCCGCGACTGAAATTCGACGAGCATGCCGTGGTAAGGGACATCGATA
TTGCACTTACCAATTGTCATCAGAGTGTTTCAGAATGGCTTCGCGAGGTA
GGTCAGACTGCAAACGCCTCGCGACCTTCCTCGACGACTCCACGTGCCGA
GGTGACAATGGCATACGCCTCATATATTATCAAGGTTCTCTTTGTAATGC
TGTATGGGGAATGGGATGCCACCAGTATGCTGGAAAACCATGGGGACTGG
ATCACCTCCGCACAATTCTCTGAGTGCGCCTCTCATTCAATCGCTGCAGC
CCAGCAAATCTCCTATGTCCTCTCGATCGATCCCGAACTGTCGTTCATGC
CCTACCTGGTGGGGATTTATCTTTTCCACGGCAGTCTCGTGCTTCTTTTG
TTTGCTGAGCGAATGCCTCTCGTTGGCCCGAACCCGTCGGTGGAGGAAGC
CTGTGAAGTAATCATCCGCGCGCATGTTGGCCGCGGGCTGCCGCTTTCCA
TGTCTCGAGCCCCTCCTTCCTCATCTGAAGAGTGTCTTGAGCCCAGAAGA
CGCTTGCAGTCTGCTCGAAATCTTCTTTACCGAGCCCGGTGAGTCCGCCG
GATCCTCCCATAGCCCCTACGTTCTCTCCCCCGTGCTTCGAAGATCCGCG
GTCTTGGATCCGATCAAGCCGCGGCCGACCTCTCCAGCGCTTCTGGCAAC
AATGCTTTGGTGTGCAGCGCACACGGCAAATGGGAGACTGTACTATATCC
CAGGATCGCGGGCACGAATCGTTGATCACCTTTACTGCCTGGTGATGTCC
TTACTGCAGCGCCTGGACCCGGATAATTGGCGTCGCGTAAACGGGGGCTG
GCAGTTGGAAAACGACTGTGTCTCCGCCCTTGATGCTGGAGACCCAGACC
GCGCTCGCAGGACTTTCGGGACTGGCCCTACCCCTACGGTAGACGATGTC
CTCACGTTCGTCATCCTGACTATCGTTATTTCCGGTGGCGAATACAAGTC
AGACTGCTTGAAGTGGTGGAACAAAGCACTTCGCTTGATCAAGCATTTTG
GGTTTCACCAGGACCCCTTGCGGACTGGCCAGCCGAAACGGGGATCACTT
CAGATCATCGAAGAACAAGAAGAACAACGGCGGGCTTTCTGGTTGGTCTA
TGCCTTGGATCGGCACTTGGCCGTATCTCACAATCGTGCCGTTTATCTCC
TCGACGCCGAATGTAAAGTGCTTACGCCCCTACCAGAATCTTGCTGGCAG
AGGCTGCATGCCTTTACAGCTGACACCCTGCCCTCGAGGACCTACGGCCC
GCCAACTGTCATTTCGGGAACTGGGCTCTTTGAGTACTTCCTCCCCTTGA
TGTCTATTTTGGGGGATATTATCGAGTTTCGTCTGTGGCGCCACCATCCG
CGACTGAAATTCGACGAGCATGCCGTGGTAAGGGACATCGATATTGCACT
TACCAATTGTCATCAGAGTGTTTCAGAATGGCTTCGCGAGGTAGGTCAGA
CTGCAAACGCCTCGCGACCTTCCTCGACGACTCCACGTGCCGAGGTGACA
ATGGCATACGCCTCATATATTATCAAGGTTCTCTTTGTAATGCTGTATGG
GGAATGGGATGCCACCAGTATGCTGGAAAACCATGGGGACTGGATCACCT
CCGCACAATTCTCTGAGTGCGCCTCTCATTCAATCGCTGCAGCCCAGCAA
ATCTCCTATGTCCTCTCGATCGATCCCGAACTGTCGTTCATGCCCTACCT
GGTGGGGATTTATCTTTTCCACGGCAGTCTCGTGCTTCTTTTGTTTGCTG
AGCGAATGCCTCTCGTTGGCCCGAACCCGTCGGTGGAGGAAGCCTGTGAA
GTAATCATCCGCGCGCATGTTGGCCGCGGGCTGCCGCTTTCCATGTCTCG
AGCCCCTCCTTCCTCATCTGAAGAGTGTCTTGAGCCCAGAAGACGCTTGC
AGTCTGCTCGAAATCTTCTTTACCGAGCCCGGTGAGTCCGCCGGATCCTC
CCATAGCCCCTACGTTCTCTCCCCCGTGCTTCGAAGATCCGCGGTCTTGG
ATCCGATCAAGCCGCGGCCGACCTCTCCAGCGCTTCTGGCAACAATGCTT
TGGTGTGCAGCGCACACGGCAAATGGGAGACTGTACTATATCCCAGGATC
GCGGGCACGAATCGTTGATCACCTTTACTGCCTGGTGATGTCCTTACTGC
AGCGCCTGGACCCGGATAATTGGCGTCGCGTAAACG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
Vocabulary: Biological Process
TermDefinition
GO:0006351transcription, DNA-templated
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
GO:0008270zinc ion binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ASPNIDRAFT_130791ASPNIDRAFT_130791Aspergillus niger ATCC 1015gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_130791-T1ASPNIDRAFT_130791-T1-proteinAspergillus niger ATCC 1015polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_130791-T1.cdsASPNIDRAFT_130791-T1.cdsAspergillus niger ATCC 1015CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_130791-T1.utr3p1ASPNIDRAFT_130791-T1.utr3p1Aspergillus niger ATCC 1015three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_130791-T1.exon2ASPNIDRAFT_130791-T1.exon2Aspergillus niger ATCC 1015exon
ASPNIDRAFT_130791-T1.exon1ASPNIDRAFT_130791-T1.exon1Aspergillus niger ATCC 1015exon


Properties
Property NameValue
NoteantiSMASH:Cluster_10000191.10
NoteEggNog:ENOG41
DBxrefInterPro:IPR007219
DBxrefPFAM:PF04082
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000019.1supercontigACJE01000019.1:1607309..1608783 -
Powered by Drupal