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ASPNIDRAFT_130857-T1, ASPNIDRAFT_130857-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_130857-T1
Unique NameASPNIDRAFT_130857-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000010.1:1917809..1919811+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_130857-T1 ID=ASPNIDRAFT_130857-T1|Name=ASPNIDRAFT_130857-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=2003bp|location=Sequence derived from alignment at ACJE01000010.1:1917809..1919811+ (Aspergillus niger ATCC 1015)
GCCATCGTAATAGGAGCCGGCGGCGCCGGCCTCCGCGCCGCAGTCGGTCT
GACCGAGTCAGGGTTCCGCACCGCATGCATCACGAAACTGGTAGCATACC
CTATACCCATTCCCTTCACATATATAACCCCCGAACAATCTCACAAAAGA
GAGAAGTGACAATGAAATTAAGTTTGAACATGATAGTTCCCCACACGCTC
CCACACCGTCGCAGCCCAAGGCGGCATCAACGCCGCGCTAGGTAACATGA
CGAAAGACGATTACCGCTGGCACATGTACGACACAGTCAAGGGCTCAGAC
TGGCTAGGAGACCAAGATGCAATCCACTATATGACAAGAGAAGCACCGAA
GGCTATATACGAGCTGGAGAACTACGGCATGGCGTTTTCCAGAACAGAAG
ATGGTCGCATATACCAGCGGGCTCTTGGGGGACAGAGTCTGGATTATGGG
AAAGGAGGGCAGGCGTATCGGACTGCTTGTGCGGCGGATCGGACGGGTCA
TGCCATGTTGCATGCTCTGTATGGGGAGGCGTTGAAGGTATATCACGCCA
TCATAATATACTGTAGAAATGATGAACCCTGGTTCAATATAGTACTCTGG
CAGAGACTGACTGACTGACGGATGTGTTTAAACTCCAGCACGATACCAAA
TTCTTCGTTGAATTCTTCGCCCTTGATCTTCTCATGGTCGACGGTGCCTG
CGTTGGGGTCATCTGCCTCTCTCTTGAAGACGGCACGCTGCATCGCTTTT
TTGCGCGAAACACTGTCCTCGCGACGGGCGGTTACGGCCGGGCTTACTTC
TCCTGCACGTCTGCACATACTTCTACCGGAGATGGTAATGCCATGGTTGC
CCGCGCGGGTCTTCCTAACCAGGATATGGAGTTCGTGCAGTTCCACCCTT
CTGAGATCCATGGCGCCGGGGTGCTCATCACGGAAGGTGCTCGCGGGGAG
GGCGGATATCTCCTCAATGCGCACGGCGAACGCTTCATGGAGCGGTATGC
CCCGACAGCTAAAGACCTGGCTAGTCGGGATGTAGTAGCAAGAGCCATGA
ATCTTGAGATCCGCGAGGGCCGGGGCTGTGGCCCGGATAAGGATCATATC
CATCTCCAGCTGTCTCATTTACCTGCCGAGCTCATTCGTTCACGACTCCC
TGGGATTCTTGAGACGGCGTCAATTTTCGCGGGGATTGACATTACTCGGG
ATCCTATTCCTGTTGTTCCTACGGTTCATTACTGCATGGGCGGGATACCG
ACGAACTATAAAGGCCAGGTGCTTACTAGTAGTAGCCACACTTCCTCGGG
GACAAACATCCCAGATGCAGAGGTAGAACCCGTCCCAGGCCTCTACGCAG
CCGGCGAATGTGCCAGTGTCAGCGTGCACGGCGCCAACCGACTCGGCGCA
AACTCGCTCCTGGACATAGTTGTCTTCGGCCGGGCGTGTGCACTCCACAT
CGCCGAGACCAACGAACCCAACATGCCGCTTCACAATATCCCACATGATG
ATACTCCTCCGGCAAGCCTAGGCCAAGACTCTCTATCAAGCCTATCCACG
ACCCTCCACGCAACAGGCGACCTCCCGTCTTCATCACTACGCCACAACCT
CCAACGAGCCATGCAAACGGACCTCGCTGTGTTCCGCACGCACGAATCCC
TTACCAGAGGACTAAGTAAAGTGATCCAAGTGCAGAATGATTTCTCCACG
CGACTCAGAACAAGCGATAGAAGTCTAATCTGGAATTCAGACCTAGTAGA
GACACTGGAGTTGAGGAATCTGCTGACGTGCGCGGCGCAGACGGCTATGG
CGGCGTTGTGTAGGACGGAGAGTCGGGGGAGTCATGCGAGGGAGGATTTC
CCGGAGAGGAACGATGAGGGGTGGTTGAAGCATAGTTGGACGTGGCAGAA
GGACGAAAAAGAGGAGGGGGTTCGGGTGGGGTATCGGGGGGTGATTATGA
AGACGTTGGATGAGGGGGATTGTAAGAGTGTGCCGCCGGTGAAGAGGAGC
TAC
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Coding sequence (CDS) from alignment at ACJE01000010.1:1917809..1919811+

>ASPNIDRAFT_130857-T1 ID=ASPNIDRAFT_130857-T1|Name=ASPNIDRAFT_130857-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=5418bp|location=Sequence derived from alignment at ACJE01000010.1:1917809..1919811+ (Aspergillus niger ATCC 1015)
GCCATCGTAATAGGAGCCGGCGGCGCCGGCCTCCGCGCCGCAGTCGGTCT
GACCGAGTCAGGGTTCCGCACCGCATGCATCACGAAACTGTTCCCCACAC
GCTCCCACACCGTCGCAGCCCAAGGCGGCATCAACGCCGCGCTAGGTAAC
ATGACGAAAGACGATTACCGCTGGCACATGTACGACACAGTCAAGGGCTC
AGACTGGCTAGGAGACCAAGATGCAATCCACTATATGACAAGAGAAGCAC
CGAAGGCTATATACGAGCTGGAGAACTACGGCATGGCGTTTTCCAGAACA
GAAGATGGTCGCATATACCAGCGGGCTCTTGGGGGACAGAGTCTGGATTA
TGGGAAAGGAGGGCAGGCGTATCGGACTGCTTGTGCGGCGGATCGGACGG
GTCATGCCATGTTGCATGCTCTGTATGGGGAGGCGTTGAAGCACGATACC
AAATTCTTCGTTGAATTCTTCGCCCTTGATCTTCTCATGGTCGACGGTGC
CTGCGTTGGGGTCATCTGCCTCTCTCTTGAAGACGGCACGCTGCATCGCT
TTTTTGCGCGAAACACTGTCCTCGCGACGGGCGGTTACGGCCGGGCTTAC
TTCTCCTGCACGTCTGCACATACTTCTACCGGAGATGGTAATGCCATGGT
TGCCCGCGCGGGTCTTCCTAACCAGGATATGGAGTTCGTGCAGTTCCACC
CTTCTGAGATCCATGGCGCCGGGGTGCTCATCACGGAAGGTGCTCGCGGG
GAGGGCGGATATCTCCTCAATGCGCACGGCGAACGCTTCATGGAGCGGTA
TGCCCCGACAGCTAAAGACCTGGCTAGTCGGGATGTAGTAGCAAGAGCCA
TGAATCTTGAGATCCGCGAGGGCCGGGGCTGTGGCCCGGATAAGGATCAT
ATCCATCTCCAGCTGTCTCATTTACCTGCCGAGCTCATTCGTTCACGACT
CCCTGGGATTCTTGAGACGGCGTCAATTTTCGCGGGGATTGACATTACTC
GGGATCCTATTCCTGTTGTTCCTACGGTTCATTACTGCATGGGCGGGATA
CCGACGAACTATAAAGGCCAGGTGCTTACTAGTAGTAGCCACACTTCCTC
GGGGACAAACATCCCAGATGCAGAGGTAGAACCCGTCCCAGGCCTCTACG
CAGCCGGCGAATGTGCCAGTGTCAGCGTGCACGGCGCCAACCGACTCGGC
GCAAACTCGCTCCTGGACATAGTTGTCTTCGGCCGGGCGTGTGCACTCCA
CATCGCCGAGACCAACGAACCCAACATGCCGCTTCACAATATCCCACATG
ATGATACTCCTCCGGCAAGCCTAGGCCAAGACTCTCTATCAAGCCTATCC
ACGACCCTCCACGCAACAGGCGACCTCCCGTCTTCATCACTACGCCACAA
CCTCCAACGAGCCATGCAAACGGACCTCGCTGTGTTCCGCACGCACGAAT
CCCTTACCAGAGGACTAAGTAAAGTGATCCAAGTGCAGAATGATTTCTCC
ACGCGACTCAGAACAAGCGATAGAAGTCTAATCTGGAATTCAGACCTAGT
AGAGACACTGGAGTTGAGGAATCTGCTGACGTGCGCGGCGCAGACGGCTA
TGGCGGCGTTGTGTAGGACGGAGAGTCGGGGGAGTCATGCGAGGGAGGAT
TTCCCGGAGAGGAACGATGAGGGGTGGTTGAAGCATAGTTGGACGTGGCA
GAAGGACGAAAAAGAGGAGGGGGTTCGGGTGGGGTATCGGGGGGTGATTA
TGAAGACGTTGGATGAGGGGGATTGTAAGAGTGTGCCGCCGGTGAAGAGG
AGCTACGCCATCGTAATAGGAGCCGGCGGCGCCGGCCTCCGCGCCGCAGT
CGGTCTGACCGAGTCAGGGTTCCGCACCGCATGCATCACGAAACTGTTCC
CCACACGCTCCCACACCGTCGCAGCCCAAGGCGGCATCAACGCCGCGCTA
GGTAACATGACGAAAGACGATTACCGCTGGCACATGTACGACACAGTCAA
GGGCTCAGACTGGCTAGGAGACCAAGATGCAATCCACTATATGACAAGAG
AAGCACCGAAGGCTATATACGAGCTGGAGAACTACGGCATGGCGTTTTCC
AGAACAGAAGATGGTCGCATATACCAGCGGGCTCTTGGGGGACAGAGTCT
GGATTATGGGAAAGGAGGGCAGGCGTATCGGACTGCTTGTGCGGCGGATC
GGACGGGTCATGCCATGTTGCATGCTCTGTATGGGGAGGCGTTGAAGCAC
GATACCAAATTCTTCGTTGAATTCTTCGCCCTTGATCTTCTCATGGTCGA
CGGTGCCTGCGTTGGGGTCATCTGCCTCTCTCTTGAAGACGGCACGCTGC
ATCGCTTTTTTGCGCGAAACACTGTCCTCGCGACGGGCGGTTACGGCCGG
GCTTACTTCTCCTGCACGTCTGCACATACTTCTACCGGAGATGGTAATGC
CATGGTTGCCCGCGCGGGTCTTCCTAACCAGGATATGGAGTTCGTGCAGT
TCCACCCTTCTGAGATCCATGGCGCCGGGGTGCTCATCACGGAAGGTGCT
CGCGGGGAGGGCGGATATCTCCTCAATGCGCACGGCGAACGCTTCATGGA
GCGGTATGCCCCGACAGCTAAAGACCTGGCTAGTCGGGATGTAGTAGCAA
GAGCCATGAATCTTGAGATCCGCGAGGGCCGGGGCTGTGGCCCGGATAAG
GATCATATCCATCTCCAGCTGTCTCATTTACCTGCCGAGCTCATTCGTTC
ACGACTCCCTGGGATTCTTGAGACGGCGTCAATTTTCGCGGGGATTGACA
TTACTCGGGATCCTATTCCTGTTGTTCCTACGGTTCATTACTGCATGGGC
GGGATACCGACGAACTATAAAGGCCAGGTGCTTACTAGTAGTAGCCACAC
TTCCTCGGGGACAAACATCCCAGATGCAGAGGTAGAACCCGTCCCAGGCC
TCTACGCAGCCGGCGAATGTGCCAGTGTCAGCGTGCACGGCGCCAACCGA
CTCGGCGCAAACTCGCTCCTGGACATAGTTGTCTTCGGCCGGGCGTGTGC
ACTCCACATCGCCGAGACCAACGAACCCAACATGCCGCTTCACAATATCC
CACATGATGATACTCCTCCGGCAAGCCTAGGCCAAGACTCTCTATCAAGC
CTATCCACGACCCTCCACGCAACAGGCGACCTCCCGTCTTCATCACTACG
CCACAACCTCCAACGAGCCATGCAAACGGACCTCGCTGTGTTCCGCACGC
ACGAATCCCTTACCAGAGGACTAAGTAAAGTGATCCAAGTGCAGAATGAT
TTCTCCACGCGACTCAGAACAAGCGATAGAAGTCTAATCTGGAATTCAGA
CCTAGTAGAGACACTGGAGTTGAGGAATCTGCTGACGTGCGCGGCGCAGA
CGGCTATGGCGGCGTTGTGTAGGACGGAGAGTCGGGGGAGTCATGCGAGG
GAGGATTTCCCGGAGAGGAACGATGAGGGGTGGTTGAAGCATAGTTGGAC
GTGGCAGAAGGACGAAAAAGAGGAGGGGGTTCGGGTGGGGTATCGGGGGG
TGATTATGAAGACGTTGGATGAGGGGGATTGTAAGAGTGTGCCGCCGGTG
AAGAGGAGCTACGCCATCGTAATAGGAGCCGGCGGCGCCGGCCTCCGCGC
CGCAGTCGGTCTGACCGAGTCAGGGTTCCGCACCGCATGCATCACGAAAC
TGTTCCCCACACGCTCCCACACCGTCGCAGCCCAAGGCGGCATCAACGCC
GCGCTAGGTAACATGACGAAAGACGATTACCGCTGGCACATGTACGACAC
AGTCAAGGGCTCAGACTGGCTAGGAGACCAAGATGCAATCCACTATATGA
CAAGAGAAGCACCGAAGGCTATATACGAGCTGGAGAACTACGGCATGGCG
TTTTCCAGAACAGAAGATGGTCGCATATACCAGCGGGCTCTTGGGGGACA
GAGTCTGGATTATGGGAAAGGAGGGCAGGCGTATCGGACTGCTTGTGCGG
CGGATCGGACGGGTCATGCCATGTTGCATGCTCTGTATGGGGAGGCGTTG
AAGCACGATACCAAATTCTTCGTTGAATTCTTCGCCCTTGATCTTCTCAT
GGTCGACGGTGCCTGCGTTGGGGTCATCTGCCTCTCTCTTGAAGACGGCA
CGCTGCATCGCTTTTTTGCGCGAAACACTGTCCTCGCGACGGGCGGTTAC
GGCCGGGCTTACTTCTCCTGCACGTCTGCACATACTTCTACCGGAGATGG
TAATGCCATGGTTGCCCGCGCGGGTCTTCCTAACCAGGATATGGAGTTCG
TGCAGTTCCACCCTTCTGAGATCCATGGCGCCGGGGTGCTCATCACGGAA
GGTGCTCGCGGGGAGGGCGGATATCTCCTCAATGCGCACGGCGAACGCTT
CATGGAGCGGTATGCCCCGACAGCTAAAGACCTGGCTAGTCGGGATGTAG
TAGCAAGAGCCATGAATCTTGAGATCCGCGAGGGCCGGGGCTGTGGCCCG
GATAAGGATCATATCCATCTCCAGCTGTCTCATTTACCTGCCGAGCTCAT
TCGTTCACGACTCCCTGGGATTCTTGAGACGGCGTCAATTTTCGCGGGGA
TTGACATTACTCGGGATCCTATTCCTGTTGTTCCTACGGTTCATTACTGC
ATGGGCGGGATACCGACGAACTATAAAGGCCAGGTGCTTACTAGTAGTAG
CCACACTTCCTCGGGGACAAACATCCCAGATGCAGAGGTAGAACCCGTCC
CAGGCCTCTACGCAGCCGGCGAATGTGCCAGTGTCAGCGTGCACGGCGCC
AACCGACTCGGCGCAAACTCGCTCCTGGACATAGTTGTCTTCGGCCGGGC
GTGTGCACTCCACATCGCCGAGACCAACGAACCCAACATGCCGCTTCACA
ATATCCCACATGATGATACTCCTCCGGCAAGCCTAGGCCAAGACTCTCTA
TCAAGCCTATCCACGACCCTCCACGCAACAGGCGACCTCCCGTCTTCATC
ACTACGCCACAACCTCCAACGAGCCATGCAAACGGACCTCGCTGTGTTCC
GCACGCACGAATCCCTTACCAGAGGACTAAGTAAAGTGATCCAAGTGCAG
AATGATTTCTCCACGCGACTCAGAACAAGCGATAGAAGTCTAATCTGGAA
TTCAGACCTAGTAGAGACACTGGAGTTGAGGAATCTGCTGACGTGCGCGG
CGCAGACGGCTATGGCGGCGTTGTGTAGGACGGAGAGTCGGGGGAGTCAT
GCGAGGGAGGATTTCCCGGAGAGGAACGATGAGGGGTGGTTGAAGCATAG
TTGGACGTGGCAGAAGGACGAAAAAGAGGAGGGGGTTCGGGTGGGGTATC
GGGGGGTGATTATGAAGACGTTGGATGAGGGGGATTGTAAGAGTGTGCCG
CCGGTGAAGAGGAGCTAC
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0050660flavin adenine dinucleotide binding
GO:0016627oxidoreductase activity, acting on the CH-CH group of donors
GO:0016491oxidoreductase activity
Vocabulary: Biological Process
TermDefinition
GO:0022900electron transport chain
GO:0006099tricarboxylic acid cycle
GO:0055114oxidation-reduction process
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
SDH1_2ASPNIDRAFT_130857Aspergillus niger ATCC 1015gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_130857-T1.exon1ASPNIDRAFT_130857-T1.exon1Aspergillus niger ATCC 1015exon
ASPNIDRAFT_130857-T1.exon2ASPNIDRAFT_130857-T1.exon2Aspergillus niger ATCC 1015exon
ASPNIDRAFT_130857-T1.exon3ASPNIDRAFT_130857-T1.exon3Aspergillus niger ATCC 1015exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_130857-T1.cdsASPNIDRAFT_130857-T1.cdsAspergillus niger ATCC 1015CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_130857-T1ASPNIDRAFT_130857-T1-proteinAspergillus niger ATCC 1015polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR037099
DBxrefInterPro:IPR003952
DBxrefInterPro:IPR014006
DBxrefInterPro:IPR003953
DBxrefInterPro:IPR027477
DBxrefInterPro:IPR036188
DBxrefInterPro:IPR011281
DBxrefInterPro:IPR015939
DBxrefPFAM:PF02910
DBxrefPFAM:PF00890
Productsuccinate dehydrogenase flavoprotein subunit
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000010.1supercontigACJE01000010.1:1917809..1919811 +
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