|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at ACJE01000010.1:155403..157142- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >ASPNIDRAFT_131892-T1 ID=ASPNIDRAFT_131892-T1|Name=ASPNIDRAFT_131892-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=1740bp|location=Sequence derived from alignment at ACJE01000010.1:155403..157142- (Aspergillus niger ATCC 1015)
CTTTATGTGTCTTTCTTTCTGACAGGGCTCGAGGGCACGATCGTGAGTAC
CTCACTTGTTGCCATCACAGATGACCTGCGAGGATTTGGCCGAAGCAGCT
GGATTATCACCTCCTATCTTCTAACGTATGCGGGTAAGGATCTTATACCC
CAGGATTGCCTCTCGTACTTCTTGCACTTACCAACTCGTACTCAGGCTTT
CTCATGATCTGGTCCAAAGCTGGTGACATTTGGGGAGTGAAGCCTATGCT
GCTCGTCTCGTTGGCCATTTTCACGGCGTTCTCCGGTGGCTGCAGTGGTG
CACGTACTCTATCAGACTTGTAAAGATCTACCCTTCCCAAACAGTACCCC
ATCGGACTATGCTGACTACTGGCCAGAATCATATGCCGAGCATTTCAAGG
CATTGGAGCTGCAGGTATTTACAGTTTGGTCATATTCTCCTTGATTCGGA
TGGTGTCCAAAAAGCACTATGCTGCCGTCACCGGCTTGTCCGGGGTTGTA
TTCTCCCTTGGCCTCGTCTTGGGCCCCCTATTCGGAGGGGCGATTGCAGA
AGATGGGAACTGGCGCTGGGTCTTTCTGTTAAAGTGCGGAATAAAACAAA
GTACGGGACAATCCAGAATCTGTCACTAACGCTCCCCAGTGTTCCAGCCG
GGGCTGTGTCCTGGGGCCTGATCTTCTTTTCAATGCCACCCAACTTTCCA
GCGACATCTGAGATAGAGGCTCCAGCACCGCAGCCTTCTCAATTTTGGTC
ACAACAATGGTCGTTAATTCGCCAGGTTGATTTTCTTGGGGCATTCCTCG
TACTAGCAGCATCGGTCTTTATAGTTGCTGCTTTGCAGGAAGGTAACTAT
GACTTTGGTTGGGACTCCAGTGCAGTGATCATTTTCTTTGTTCTCTCCGG
TATATGTGTCCCTTTGTTTCTGCTATGGCAGTGGCTCCTAAGTCGACGAG
AACTTACCTGCCAGCCAATGTTGCCCTGGCGATTGTTGACAAATCGCCTG
TTCATGGGGACTATACTGTATGTCTGGCCTGCTTCACGCGTCTCATGAAT
GGTGATATACTAACCAGTGGACTCGATATACTCAGTGGATCCTTGACCAC
AGGCCTCAGCATGACTGTGAGCATAGTCGAAATACCACAGCGATTCCAGG
TCGTTAACGGCAGCTCACCGATCGGAGCGGGTGTCAAACTTCTCGCCTTT
GCTGTCAGCGTCCCTGCTGGCATGATGTTCTGCTCCATACTCACCGGTCG
CCTCCCAGTTCCTCTTGTTTACGTTGGCATTGGCGGTGTGATCATGCAGG
TTGTCGGGTTCTTCCTCTTCTCTGAAATCAAACCAGAAACCCACATATGG
CCTGGCCAGTTCGGCTATCTCGTTCTATCGGGGCTGGGCACTGGTCTTGG
GGTTGCTGTATTTTATCTGATGCTACCACTGGTGGTAGCAGTCACGGACC
AGTCCATTGCGCTGGGAACAGGCTTCCAGCTGCGCATGCTGGGCGGGGCA
CTTGGCATCGCAGCAGCCACGGCCATTTTACACAGCCATACTCGTAGCGG
ACTTTCAGCGTTGTTACCGTCAGATGAGGTGGATGCATTTTCCGTATCCA
CGCAACTGATCGATACCTTGACACCAAGTATGCAGTCTCAGGTACGGGAG
GTTTATGCTGAAGCGTATAGCATGCAGATGAAGATGGTTGGGGGTTTCTC
AGCTGCCCAGTTCCTCGCCTTGGGGCTTGTGTGGAAACGG back to topCoding sequence (CDS) from alignment at ACJE01000010.1:155403..157142- >ASPNIDRAFT_131892-T1 ID=ASPNIDRAFT_131892-T1|Name=ASPNIDRAFT_131892-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=7485bp|location=Sequence derived from alignment at ACJE01000010.1:155403..157142- (Aspergillus niger ATCC 1015)
TGGATCCTTGACCACAGGCCTCAGCATGACTGTGAGCATAGTCGAAATAC
CACAGCGATTCCAGGTCGTTAACGGCAGCTCACCGATCGGAGCGGGTGTC
AAACTTCTCGCCTTTGCTGTCAGCGTCCCTGCTGGCATGATGTTCTGCTC
CATACTCACCGGTCGCCTCCCAGTTCCTCTTGTTTACGTTGGCATTGGCG
GTGTGATCATGCAGGTTGTCGGGTTCTTCCTCTTCTCTGAAATCAAACCA
GAAACCCACATATGGCCTGGCCAGTTCGGCTATCTCGTTCTATCGGGGCT
GGGCACTGGTCTTGGGGTTGCTGTATTTTATCTGATGCTACCACTGGTGG
TAGCAGTCACGGACCAGTCCATTGCGCTGGGAACAGGCTTCCAGCTGCGC
ATGCTGGGCGGGGCACTTGGCATCGCAGCAGCCACGGCCATTTTACACAG
CCATACTCGTAGCGGACTTTCAGCGTTGTTACCGTCAGATGAGGTGGATG
CATTTTCCGTATCCACGCAACTGATCGATACCTTGACACCAAGTATGCAG
TCTCAGGTACGGGAGGTTTATGCTGAAGCGTATAGCATGCAGATGAAGAT
GGTTGGGGGTTTCTCAGCTGCCCAGTTCCTCGCCTTGGGGCTTGTGTGGA
AACGGTGTTCCAGCCGGGGCTGTGTCCTGGGGCCTGATCTTCTTTTCAAT
GCCACCCAACTTTCCAGCGACATCTGAGATAGAGGCTCCAGCACCGCAGC
CTTCTCAATTTTGGTCACAACAATGGTCGTTAATTCGCCAGGTTGATTTT
CTTGGGGCATTCCTCGTACTAGCAGCATCGGTCTTTATAGTTGCTGCTTT
GCAGGAAGGTAACTATGACTTTGGTTGGGACTCCAGTGCAGTGATCATTT
TCTTTGTTCTCTCCGGTATATGTGTCCCTTTGTTTCTGCTATGGCAGTGG
CTCCTAAGTCGACGAGAACTTACCTGCCAGCCAATGTTGCCCTGGCGATT
GTTGACAAATCGCCTGTTCATGGGGACTATACTAATCATATGCCGAGCAT
TTCAAGGCATTGGAGCTGCAGGTATTTACAGTTTGGTCATATTCTCCTTG
ATTCGGATGGTGTCCAAAAAGCACTATGCTGCCGTCACCGGCTTGTCCGG
GGTTGTATTCTCCCTTGGCCTCGTCTTGGGCCCCCTATTCGGAGGGGCGA
TTGCAGAAGATGGGAACTGGCGCTGGGTCTTTCTGTTAAAGCTTTCTCAT
GATCTGGTCCAAAGCTGGTGACATTTGGGGAGTGAAGCCTATGCTGCTCG
TCTCGTTGGCCATTTTCACGGCGTTCTCCGGTGGCTGCAGTGGTGCACGT
ACTCTATCAGACTTCTTTATGTGTCTTTCTTTCTGACAGGGCTCGAGGGC
ACGATCGTGAGTACCTCACTTGTTGCCATCACAGATGACCTGCGAGGATT
TGGCCGAAGCAGCTGGATTATCACCTCCTATCTTCTAACGTATGCGGTGG
ATCCTTGACCACAGGCCTCAGCATGACTGTGAGCATAGTCGAAATACCAC
AGCGATTCCAGGTCGTTAACGGCAGCTCACCGATCGGAGCGGGTGTCAAA
CTTCTCGCCTTTGCTGTCAGCGTCCCTGCTGGCATGATGTTCTGCTCCAT
ACTCACCGGTCGCCTCCCAGTTCCTCTTGTTTACGTTGGCATTGGCGGTG
TGATCATGCAGGTTGTCGGGTTCTTCCTCTTCTCTGAAATCAAACCAGAA
ACCCACATATGGCCTGGCCAGTTCGGCTATCTCGTTCTATCGGGGCTGGG
CACTGGTCTTGGGGTTGCTGTATTTTATCTGATGCTACCACTGGTGGTAG
CAGTCACGGACCAGTCCATTGCGCTGGGAACAGGCTTCCAGCTGCGCATG
CTGGGCGGGGCACTTGGCATCGCAGCAGCCACGGCCATTTTACACAGCCA
TACTCGTAGCGGACTTTCAGCGTTGTTACCGTCAGATGAGGTGGATGCAT
TTTCCGTATCCACGCAACTGATCGATACCTTGACACCAAGTATGCAGTCT
CAGGTACGGGAGGTTTATGCTGAAGCGTATAGCATGCAGATGAAGATGGT
TGGGGGTTTCTCAGCTGCCCAGTTCCTCGCCTTGGGGCTTGTGTGGAAAC
GGTGTTCCAGCCGGGGCTGTGTCCTGGGGCCTGATCTTCTTTTCAATGCC
ACCCAACTTTCCAGCGACATCTGAGATAGAGGCTCCAGCACCGCAGCCTT
CTCAATTTTGGTCACAACAATGGTCGTTAATTCGCCAGGTTGATTTTCTT
GGGGCATTCCTCGTACTAGCAGCATCGGTCTTTATAGTTGCTGCTTTGCA
GGAAGGTAACTATGACTTTGGTTGGGACTCCAGTGCAGTGATCATTTTCT
TTGTTCTCTCCGGTATATGTGTCCCTTTGTTTCTGCTATGGCAGTGGCTC
CTAAGTCGACGAGAACTTACCTGCCAGCCAATGTTGCCCTGGCGATTGTT
GACAAATCGCCTGTTCATGGGGACTATACTAATCATATGCCGAGCATTTC
AAGGCATTGGAGCTGCAGGTATTTACAGTTTGGTCATATTCTCCTTGATT
CGGATGGTGTCCAAAAAGCACTATGCTGCCGTCACCGGCTTGTCCGGGGT
TGTATTCTCCCTTGGCCTCGTCTTGGGCCCCCTATTCGGAGGGGCGATTG
CAGAAGATGGGAACTGGCGCTGGGTCTTTCTGTTAAAGCTTTCTCATGAT
CTGGTCCAAAGCTGGTGACATTTGGGGAGTGAAGCCTATGCTGCTCGTCT
CGTTGGCCATTTTCACGGCGTTCTCCGGTGGCTGCAGTGGTGCACGTACT
CTATCAGACTTCTTTATGTGTCTTTCTTTCTGACAGGGCTCGAGGGCACG
ATCGTGAGTACCTCACTTGTTGCCATCACAGATGACCTGCGAGGATTTGG
CCGAAGCAGCTGGATTATCACCTCCTATCTTCTAACGTATGCGGTGGATC
CTTGACCACAGGCCTCAGCATGACTGTGAGCATAGTCGAAATACCACAGC
GATTCCAGGTCGTTAACGGCAGCTCACCGATCGGAGCGGGTGTCAAACTT
CTCGCCTTTGCTGTCAGCGTCCCTGCTGGCATGATGTTCTGCTCCATACT
CACCGGTCGCCTCCCAGTTCCTCTTGTTTACGTTGGCATTGGCGGTGTGA
TCATGCAGGTTGTCGGGTTCTTCCTCTTCTCTGAAATCAAACCAGAAACC
CACATATGGCCTGGCCAGTTCGGCTATCTCGTTCTATCGGGGCTGGGCAC
TGGTCTTGGGGTTGCTGTATTTTATCTGATGCTACCACTGGTGGTAGCAG
TCACGGACCAGTCCATTGCGCTGGGAACAGGCTTCCAGCTGCGCATGCTG
GGCGGGGCACTTGGCATCGCAGCAGCCACGGCCATTTTACACAGCCATAC
TCGTAGCGGACTTTCAGCGTTGTTACCGTCAGATGAGGTGGATGCATTTT
CCGTATCCACGCAACTGATCGATACCTTGACACCAAGTATGCAGTCTCAG
GTACGGGAGGTTTATGCTGAAGCGTATAGCATGCAGATGAAGATGGTTGG
GGGTTTCTCAGCTGCCCAGTTCCTCGCCTTGGGGCTTGTGTGGAAACGGT
GTTCCAGCCGGGGCTGTGTCCTGGGGCCTGATCTTCTTTTCAATGCCACC
CAACTTTCCAGCGACATCTGAGATAGAGGCTCCAGCACCGCAGCCTTCTC
AATTTTGGTCACAACAATGGTCGTTAATTCGCCAGGTTGATTTTCTTGGG
GCATTCCTCGTACTAGCAGCATCGGTCTTTATAGTTGCTGCTTTGCAGGA
AGGTAACTATGACTTTGGTTGGGACTCCAGTGCAGTGATCATTTTCTTTG
TTCTCTCCGGTATATGTGTCCCTTTGTTTCTGCTATGGCAGTGGCTCCTA
AGTCGACGAGAACTTACCTGCCAGCCAATGTTGCCCTGGCGATTGTTGAC
AAATCGCCTGTTCATGGGGACTATACTAATCATATGCCGAGCATTTCAAG
GCATTGGAGCTGCAGGTATTTACAGTTTGGTCATATTCTCCTTGATTCGG
ATGGTGTCCAAAAAGCACTATGCTGCCGTCACCGGCTTGTCCGGGGTTGT
ATTCTCCCTTGGCCTCGTCTTGGGCCCCCTATTCGGAGGGGCGATTGCAG
AAGATGGGAACTGGCGCTGGGTCTTTCTGTTAAAGCTTTCTCATGATCTG
GTCCAAAGCTGGTGACATTTGGGGAGTGAAGCCTATGCTGCTCGTCTCGT
TGGCCATTTTCACGGCGTTCTCCGGTGGCTGCAGTGGTGCACGTACTCTA
TCAGACTTCTTTATGTGTCTTTCTTTCTGACAGGGCTCGAGGGCACGATC
GTGAGTACCTCACTTGTTGCCATCACAGATGACCTGCGAGGATTTGGCCG
AAGCAGCTGGATTATCACCTCCTATCTTCTAACGTATGCGGTGGATCCTT
GACCACAGGCCTCAGCATGACTGTGAGCATAGTCGAAATACCACAGCGAT
TCCAGGTCGTTAACGGCAGCTCACCGATCGGAGCGGGTGTCAAACTTCTC
GCCTTTGCTGTCAGCGTCCCTGCTGGCATGATGTTCTGCTCCATACTCAC
CGGTCGCCTCCCAGTTCCTCTTGTTTACGTTGGCATTGGCGGTGTGATCA
TGCAGGTTGTCGGGTTCTTCCTCTTCTCTGAAATCAAACCAGAAACCCAC
ATATGGCCTGGCCAGTTCGGCTATCTCGTTCTATCGGGGCTGGGCACTGG
TCTTGGGGTTGCTGTATTTTATCTGATGCTACCACTGGTGGTAGCAGTCA
CGGACCAGTCCATTGCGCTGGGAACAGGCTTCCAGCTGCGCATGCTGGGC
GGGGCACTTGGCATCGCAGCAGCCACGGCCATTTTACACAGCCATACTCG
TAGCGGACTTTCAGCGTTGTTACCGTCAGATGAGGTGGATGCATTTTCCG
TATCCACGCAACTGATCGATACCTTGACACCAAGTATGCAGTCTCAGGTA
CGGGAGGTTTATGCTGAAGCGTATAGCATGCAGATGAAGATGGTTGGGGG
TTTCTCAGCTGCCCAGTTCCTCGCCTTGGGGCTTGTGTGGAAACGGTGTT
CCAGCCGGGGCTGTGTCCTGGGGCCTGATCTTCTTTTCAATGCCACCCAA
CTTTCCAGCGACATCTGAGATAGAGGCTCCAGCACCGCAGCCTTCTCAAT
TTTGGTCACAACAATGGTCGTTAATTCGCCAGGTTGATTTTCTTGGGGCA
TTCCTCGTACTAGCAGCATCGGTCTTTATAGTTGCTGCTTTGCAGGAAGG
TAACTATGACTTTGGTTGGGACTCCAGTGCAGTGATCATTTTCTTTGTTC
TCTCCGGTATATGTGTCCCTTTGTTTCTGCTATGGCAGTGGCTCCTAAGT
CGACGAGAACTTACCTGCCAGCCAATGTTGCCCTGGCGATTGTTGACAAA
TCGCCTGTTCATGGGGACTATACTAATCATATGCCGAGCATTTCAAGGCA
TTGGAGCTGCAGGTATTTACAGTTTGGTCATATTCTCCTTGATTCGGATG
GTGTCCAAAAAGCACTATGCTGCCGTCACCGGCTTGTCCGGGGTTGTATT
CTCCCTTGGCCTCGTCTTGGGCCCCCTATTCGGAGGGGCGATTGCAGAAG
ATGGGAACTGGCGCTGGGTCTTTCTGTTAAAGCTTTCTCATGATCTGGTC
CAAAGCTGGTGACATTTGGGGAGTGAAGCCTATGCTGCTCGTCTCGTTGG
CCATTTTCACGGCGTTCTCCGGTGGCTGCAGTGGTGCACGTACTCTATCA
GACTTCTTTATGTGTCTTTCTTTCTGACAGGGCTCGAGGGCACGATCGTG
AGTACCTCACTTGTTGCCATCACAGATGACCTGCGAGGATTTGGCCGAAG
CAGCTGGATTATCACCTCCTATCTTCTAACGTATGCGGTGGATCCTTGAC
CACAGGCCTCAGCATGACTGTGAGCATAGTCGAAATACCACAGCGATTCC
AGGTCGTTAACGGCAGCTCACCGATCGGAGCGGGTGTCAAACTTCTCGCC
TTTGCTGTCAGCGTCCCTGCTGGCATGATGTTCTGCTCCATACTCACCGG
TCGCCTCCCAGTTCCTCTTGTTTACGTTGGCATTGGCGGTGTGATCATGC
AGGTTGTCGGGTTCTTCCTCTTCTCTGAAATCAAACCAGAAACCCACATA
TGGCCTGGCCAGTTCGGCTATCTCGTTCTATCGGGGCTGGGCACTGGTCT
TGGGGTTGCTGTATTTTATCTGATGCTACCACTGGTGGTAGCAGTCACGG
ACCAGTCCATTGCGCTGGGAACAGGCTTCCAGCTGCGCATGCTGGGCGGG
GCACTTGGCATCGCAGCAGCCACGGCCATTTTACACAGCCATACTCGTAG
CGGACTTTCAGCGTTGTTACCGTCAGATGAGGTGGATGCATTTTCCGTAT
CCACGCAACTGATCGATACCTTGACACCAAGTATGCAGTCTCAGGTACGG
GAGGTTTATGCTGAAGCGTATAGCATGCAGATGAAGATGGTTGGGGGTTT
CTCAGCTGCCCAGTTCCTCGCCTTGGGGCTTGTGTGGAAACGGTGTTCCA
GCCGGGGCTGTGTCCTGGGGCCTGATCTTCTTTTCAATGCCACCCAACTT
TCCAGCGACATCTGAGATAGAGGCTCCAGCACCGCAGCCTTCTCAATTTT
GGTCACAACAATGGTCGTTAATTCGCCAGGTTGATTTTCTTGGGGCATTC
CTCGTACTAGCAGCATCGGTCTTTATAGTTGCTGCTTTGCAGGAAGGTAA
CTATGACTTTGGTTGGGACTCCAGTGCAGTGATCATTTTCTTTGTTCTCT
CCGGTATATGTGTCCCTTTGTTTCTGCTATGGCAGTGGCTCCTAAGTCGA
CGAGAACTTACCTGCCAGCCAATGTTGCCCTGGCGATTGTTGACAAATCG
CCTGTTCATGGGGACTATACTAATCATATGCCGAGCATTTCAAGGCATTG
GAGCTGCAGGTATTTACAGTTTGGTCATATTCTCCTTGATTCGGATGGTG
TCCAAAAAGCACTATGCTGCCGTCACCGGCTTGTCCGGGGTTGTATTCTC
CCTTGGCCTCGTCTTGGGCCCCCTATTCGGAGGGGCGATTGCAGAAGATG
GGAACTGGCGCTGGGTCTTTCTGTTAAAGCTTTCTCATGATCTGGTCCAA
AGCTGGTGACATTTGGGGAGTGAAGCCTATGCTGCTCGTCTCGTTGGCCA
TTTTCACGGCGTTCTCCGGTGGCTGCAGTGGTGCACGTACTCTATCAGAC
TTCTTTATGTGTCTTTCTTTCTGACAGGGCTCGAGGGCACGATCGTGAGT
ACCTCACTTGTTGCCATCACAGATGACCTGCGAGGATTTGGCCGAAGCAG
CTGGATTATCACCTCCTATCTTCTAACGTATGCGG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005887 | integral component of plasma membrane |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0055085 | transmembrane transport |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | antiSMASH:Cluster_10000101.1 |
| Note | EggNog:ENOG41 |
| Note | SMCOG1005: EmrB/QacA |
| Note | SMCOG1005:Drug resistance transporter |
| DBxref | InterPro:IPR036259 |
| DBxref | InterPro:IPR020846 |
| DBxref | InterPro:IPR011701 |
| DBxref | PFAM:PF07690 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ACJE01000010.1 | supercontig | ACJE01000010.1:155403..157142 - |
|
