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ASPNIDRAFT_131913-T1, ASPNIDRAFT_131913-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_131913-T1
Unique NameASPNIDRAFT_131913-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000003.1:858261..859559-

Legend: CDSpolypeptideexonthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_131913-T1 ID=ASPNIDRAFT_131913-T1|Name=ASPNIDRAFT_131913-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=1299bp|location=Sequence derived from alignment at ACJE01000003.1:858261..859559- (Aspergillus niger ATCC 1015)
ATCAGAACCCGTCGCATCAAATGCGACGAAACAAAACCGCATTGTCTGCG
GTGCACGCGCTCAAATCGCACATGTGGGGGATACACATCGCTTGCGTCCG
CCCTTGTGGTGGATAAAATTAAAGAATATAGCATTCCGTTTAAAGTCCCT
GGCGGTAGATTTGATCGCCAGCTCCTCCATTTCTACTGTATCGAAGCCGC
AGCGAGTCTTTCAAGCTTTTCCGACGCGGACTTCTGGAATCGACTCATCT
TGCAGAGATGCCACCATCAGCCAGTGATTCGCAACGCACTTGTCACGCTC
AGCGCTATTTATCGAGACTATAAGTCCAAAGAGAACTCTGGGTTGGAGTC
CGACCGTACATCGCCGCAGCATCTGCAACTAATCGCCAGATCTCACAAGC
AGCTAAGGATACATCTATGTTCACCCGGCGCGTCAACTGAAGTTGCTTTG
ATCTGCAGCATGATCTTTTACGCTTTTGAGGCTCTTCTAGGCAATGCCGT
ACAGGCGATCCGACATCTTGATCAGGGGCTGATCCTGCTGGAACGTTGTC
AGGCTACTGCGCCCGTGCACCGCGCCACGGATGACATTTTTCCGCGTTTA
ACAGCCTTGTTCGCTAGCCTGGACATTCAGGCAAGCACATACACTAATAG
CCGGCAGCCTATATTGTCACTTACTTCGCCATTGGAAAGGTCTGGGCTTG
TCCCGGTCATCCCAGAAGGTTTCACCTCCGCAGATGCACAAATGTTACTC
ATCAAGTTGCAGAACTGGATGTTCCACCATCTTGCCTCTTCCCACCCATA
TAAGATTAAAGGCCTGCACCTTCTACCAGCAGATATCCTTATCGAGCGAC
ACCGGCTATATGACCAATTGACGAAATATATAGAAACTGTGAGCGCGTGT
TCGACCTATAATTCTCGCCCAAGCACGGCAAATTGTCTACTCCTTCGACT
CCAAGCTCGGATTTTCCGCACTATCCTGGCCGAGGATATTCCATCCCTGC
AGGATAAAGATCGTGAGCCACTTCGAGAATGTTTACAGGATATATCGGTC
ATTTTGGAAACTATGTCCACGGTCTCCCCTGCACAGAATATTACTTCTGC
GCAGAGATCATTCACATTAAGTACCCAGCTTGTCGCAGCGCTCTACTATA
TCTGTATGAAAAGCAATCATCCCAGCACAGTGGAGGCTGCCCTGTCATTC
CTGCGACACGAAAAGCTGCCGAGCCGCGATGGGGTCTGGGACGCACGGAC
GGTAGAAGCTGTGGTGCATGGCATCCGACATTCCAGCAAGCTGCCTGAA
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Coding sequence (CDS) from alignment at ACJE01000003.1:858261..859559-

>ASPNIDRAFT_131913-T1 ID=ASPNIDRAFT_131913-T1|Name=ASPNIDRAFT_131913-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=1297bp|location=Sequence derived from alignment at ACJE01000003.1:858261..859559- (Aspergillus niger ATCC 1015)
ATCAGAACCCGTCGCATCAAATGCGACGAAACAAAACCGCATTGTCTGCG
GTGCACGCGCTCAAATCGCACATGTGGGGGATACACATCGCTTGCGTCCG
CCCTTGTGGTGGATAAAATTAAAGAATATAGCATTCCGTTTAAAGTCCCT
GGCGGTAGATTTGATCGCCAGCTCCTCCATTTCTACTGTATCGAAGCCGC
AGCGAGTCTTTCAAGCTTTTCCGACGCGGACTTCTGGAATCGACTCATCT
TGCAGAGATGCCACCATCAGCCAGTGATTCGCAACGCACTTGTCACGCTC
AGCGCTATTTATCGAGACTATAAGTCCAAAGAGAACTCTGGGTTGGAGTC
CGACCGTACATCGCCGCAGCATCTGCAACTAATCGCCAGATCTCACAAGC
AGCTAAGGATACATCTATGTTCACCCGGCGCGTCAACTGAAGTTGCTTTG
ATCTGCAGCATGATCTTTTACGCTTTTGAGGCTCTTCTAGGCAATGCCGT
ACAGGCGATCCGACATCTTGATCAGGGGCTGATCCTGCTGGAACGTTGTC
AGGCTACTGCGCCCGTGCACCGCGCCACGGATGACATTTTTCCGCGTTTA
ACAGCCTTGTTCGCTAGCCTGGACATTCAGGCAAGCACATACACTAATAG
CCGGCAGCCTATATTGTCACTTACTTCGCCATTGGAAAGGTCTGGGCTTG
TCCCGGTCATCCCAGAAGGTTTCACCTCCGCAGATGCACAAATGTTACTC
ATCAAGTTGCAGAACTGGATGTTCCACCATCTTGCCTCTTCCCACCCATA
TAAGATTAAAGGCCTGCACCTTCTACCAGCAGATATCCTTATCGAGCGAC
ACCGGCTATATGACCAATTGACGAAATATATAGAAACTGTGAGCGCGTGT
TCGACCTATAATTCTCGCCCAAGCACGGCAAATTGTCTACTCCTTCGACT
CCAAGCTCGGATTTTCCGCACTATCCTGGCCGAGGATATTCCATCCCTGC
AGGATAAAGATCGTGAGCCACTTCGAGAATGTTTACAGGATATATCGGTC
ATTTTGGAAACTATGTCCACGGTCTCCCCTGCACAGAATATTACTTCTGC
GCAGAGATCATTCACATTAAGTACCCAGCTTGTCGCAGCGCTCTACTATA
TCTGTATGAAAAGCAATCATCCCAGCACAGTGGAGGCTGCCCTGTCATTC
CTGCGACACGAAAAGCTGCCGAGCCGCGATGGGGTCTGGGACGCACGGAC
GGTAGAAGCTGTGGTGCATGGCATCCGACATTCCAGCAAGCTGCCTG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
Vocabulary: Molecular Function
TermDefinition
GO:0000981DNA-binding transcription factor activity, RNA polymerase II-specific
GO:0008270zinc ion binding
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ASPNIDRAFT_131913ASPNIDRAFT_131913Aspergillus niger ATCC 1015gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_131913-T1.cdsASPNIDRAFT_131913-T1.cdsAspergillus niger ATCC 1015CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_131913-T1.utr3p1ASPNIDRAFT_131913-T1.utr3p1Aspergillus niger ATCC 1015three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_131913-T1.exon1ASPNIDRAFT_131913-T1.exon1Aspergillus niger ATCC 1015exon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_131913-T1ASPNIDRAFT_131913-T1-proteinAspergillus niger ATCC 1015polypeptide


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR001138
DBxrefInterPro:IPR036864
DBxrefInterPro:IPR021858
DBxrefPFAM:PF00172
DBxrefPFAM:PF11951
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000003.1supercontigACJE01000003.1:858261..859559 -
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