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Sequences
The following sequences are available for this feature:
mRNA from alignment at ACJE01000018.1:120226..121844- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >ASPNIDRAFT_132049-T1 ID=ASPNIDRAFT_132049-T1|Name=ASPNIDRAFT_132049-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=1619bp|location=Sequence derived from alignment at ACJE01000018.1:120226..121844- (Aspergillus niger ATCC 1015) CTTGCCGTTTGTCTATTTCTAACTAATCTGGAAATCCCGATCGTGACAAC
CGCCTTGGTTCGAATCACCGGGGAATTGGGAGGTCTGAATAAAATATACT
GGATTACTACAGCGTATATGCTAGGATATGCCGGACTGCTTGTCATCTCG
GCCAAGTTCAGCGACATATTTGGCCGCAAGTCATGCCTACTGGTCGCTGT
TTTTCTCTTCGTGGTGTTTTCCGGGGCTTGCGGGGCAGCCCAAACCATGG
AGCAACTGTAAGTCGACATACCTTGTTCGGGCCCTTTGATAGTCAATGAC
CGTGTGCTGCACTAGGATCGTCTTTCGTGCTTTTCAGGGTGTTGGCGGAG
CGGGCAACTATTCTCCCTGTGCTGCCATTCTGCTGGACCTGGTCCCGACA
GAGAAATATGCGACGTACATGAGTTCACTATCCCTGGTATACGCGATATC
CTTACTATTTGGACCTCTGATGGGAGGGGGTATCTCCGACTCGTCCACAT
GGCGCTGGGTGTTTCTGTTGAATGTCCCTCCGGGCGCACTGGCTGGGATA
GGGCTCGCTCTGGTCCTGCCCAATCGGTTCCCCTATCACAACGAACCATC
CAAGGAGAAGACAATGTCATCCGTGCTGGCATCATTGCGGCAAATGATTC
AGAGAGTCGACTTACTCGGCTCCAGCTTGCTGTTAGTTGCAACAATTCTC
CTGGTAACGGCTTTGGAGGAAGCCAATGAGGAATACACTTGGAATTCGGC
TTTTACCATTGTGCTGCTTATCATCTCCGGACTGGCGTGGATCGCCTTTC
TACTGTGGGAAAGACGGGTGACACTCTATTCTAAGCACATTGAGCCGGTC
TTTCCGTGGAGGTTCGTTTGTAACCGAGTCTGGGTCGGAATGTTGTTGTA
GGTCTTCTTTCTCTGCCATTGTTAACCCGGCTATCTCATTAACTGGCATC
TCTGCCACCCTAAGAAATTCCGTCTGTCTGGGGGCAGTGTGGTTCTCGAC
CATGTTCCAGTTACCCCAGCGGTTCCAAATCGTCAACCAGCTTACGGCTT
TCCAAGCGGCTGTCCGATTCATCCCTTTCACCGTGGCGAGTCCCGTGGCA
TCCGTCCTGGCACCGGCTATCGGAAAAGTGTTCAAGATTCCGCTGCTATA
CCTGGTAATCTTCGCGTCTTTGCTGCAGGTGGTTGCTTACGTCCTTCTGG
GCACTCTTCCCGACTCACTGTCGATCACCTCGGCGCAGTATGGATACCAG
GTCCTGGCCGGCTTCGGGTGTGGCATCAACATCACCCTGCTGATCCTGAT
GACACCCTTCACGATCGAAAAGCGAGACAATGCAGTCGCCATGGGGGCCA
TTACGCAGTTCCGAGTCATGGGTGGTTGCATTGGAATTTCTGTGCTGACG
GCAGTGGCCAATGGTTACCTGCAGTCTCACTTGCAGCAATGGCTCACCCC
GACCGAGATGCAGTTGGTCCTGCACTCCGCGGAAAGCCTTTCCACTCTCC
CAGCGTCAGCACAAAGCCTAGTTCGCGGGACCTTCTCGGCCAGTTACAAT
CTGCAGATGAAAATTTTGGCGGGGTTCGCTGGGGGCCAGGTTCTGGCCTC
GGTGCTTATGTGGCAGAGG back to topCoding sequence (CDS) from alignment at ACJE01000018.1:120226..121844- >ASPNIDRAFT_132049-T1 ID=ASPNIDRAFT_132049-T1|Name=ASPNIDRAFT_132049-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=4482bp|location=Sequence derived from alignment at ACJE01000018.1:120226..121844- (Aspergillus niger ATCC 1015) AAATTCCGTCTGTCTGGGGGCAGTGTGGTTCTCGACCATGTTCCAGTTAC CCCAGCGGTTCCAAATCGTCAACCAGCTTACGGCTTTCCAAGCGGCTGTC CGATTCATCCCTTTCACCGTGGCGAGTCCCGTGGCATCCGTCCTGGCACC GGCTATCGGAAAAGTGTTCAAGATTCCGCTGCTATACCTGGTAATCTTCG CGTCTTTGCTGCAGGTGGTTGCTTACGTCCTTCTGGGCACTCTTCCCGAC TCACTGTCGATCACCTCGGCGCAGTATGGATACCAGGTCCTGGCCGGCTT CGGGTGTGGCATCAACATCACCCTGCTGATCCTGATGACACCCTTCACGA TCGAAAAGCGAGACAATGCAGTCGCCATGGGGGCCATTACGCAGTTCCGA GTCATGGGTGGTTGCATTGGAATTTCTGTGCTGACGGCAGTGGCCAATGG TTACCTGCAGTCTCACTTGCAGCAATGGCTCACCCCGACCGAGATGCAGT TGGTCCTGCACTCCGCGGAAAGCCTTTCCACTCTCCCAGCGTCAGCACAA AGCCTAGTTCGCGGGACCTTCTCGGCCAGTTACAATCTGCAGATGAAAAT TTTGGCGGGGTTCGCTGGGGGCCAGGTTCTGGCCTCGGTGCTTATGTGGC AGAGGGATCGTCTTTCGTGCTTTTCAGGGTGTTGGCGGAGCGGGCAACTA TTCTCCCTGTGCTGCCATTCTGCTGGACCTGGTCCCGACAGAGAAATATG CGACGTACATGAGTTCACTATCCCTGGTATACGCGATATCCTTACTATTT GGACCTCTGATGGGAGGGGGTATCTCCGACTCGTCCACATGGCGCTGGGT GTTTCTGTTGAATGTCCCTCCGGGCGCACTGGCTGGGATAGGGCTCGCTC TGGTCCTGCCCAATCGGTTCCCCTATCACAACGAACCATCCAAGGAGAAG ACAATGTCATCCGTGCTGGCATCATTGCGGCAAATGATTCAGAGAGTCGA CTTACTCGGCTCCAGCTTGCTGTTAGTTGCAACAATTCTCCTGGTAACGG CTTTGGAGGAAGCCAATGAGGAATACACTTGGAATTCGGCTTTTACCATT GTGCTGCTTATCATCTCCGGACTGGCGTGGATCGCCTTTCTACTGTGGGA AAGACGGGTGACACTCTATTCTAAGCACATTGAGCCGGTCTTTCCGTGGA GGTTCGTTTGTAACCGAGTCTGGGTCGGAATGTTGTTCTTGCCGTTTGTC TATTTCTAACTAATCTGGAAATCCCGATCGTGACAACCGCCTTGGTTCGA ATCACCGGGGAATTGGGAGGTCTGAATAAAATATACTGGATTACTACAGC GTATATGCTAGGATATGCCGGACTGCTTGTCATCTCGGCCAAGTTCAGCG ACATATTTGGCCGCAAGTCATGCCTACTGGTCGCTGTTTTTCTCTTCGTG GTGTTTTCCGGGGCTTGCGGGGCAGCCCAAACCATGGAGCAACTAAATTC CGTCTGTCTGGGGGCAGTGTGGTTCTCGACCATGTTCCAGTTACCCCAGC GGTTCCAAATCGTCAACCAGCTTACGGCTTTCCAAGCGGCTGTCCGATTC ATCCCTTTCACCGTGGCGAGTCCCGTGGCATCCGTCCTGGCACCGGCTAT CGGAAAAGTGTTCAAGATTCCGCTGCTATACCTGGTAATCTTCGCGTCTT TGCTGCAGGTGGTTGCTTACGTCCTTCTGGGCACTCTTCCCGACTCACTG TCGATCACCTCGGCGCAGTATGGATACCAGGTCCTGGCCGGCTTCGGGTG TGGCATCAACATCACCCTGCTGATCCTGATGACACCCTTCACGATCGAAA AGCGAGACAATGCAGTCGCCATGGGGGCCATTACGCAGTTCCGAGTCATG GGTGGTTGCATTGGAATTTCTGTGCTGACGGCAGTGGCCAATGGTTACCT GCAGTCTCACTTGCAGCAATGGCTCACCCCGACCGAGATGCAGTTGGTCC TGCACTCCGCGGAAAGCCTTTCCACTCTCCCAGCGTCAGCACAAAGCCTA GTTCGCGGGACCTTCTCGGCCAGTTACAATCTGCAGATGAAAATTTTGGC GGGGTTCGCTGGGGGCCAGGTTCTGGCCTCGGTGCTTATGTGGCAGAGGG ATCGTCTTTCGTGCTTTTCAGGGTGTTGGCGGAGCGGGCAACTATTCTCC CTGTGCTGCCATTCTGCTGGACCTGGTCCCGACAGAGAAATATGCGACGT ACATGAGTTCACTATCCCTGGTATACGCGATATCCTTACTATTTGGACCT CTGATGGGAGGGGGTATCTCCGACTCGTCCACATGGCGCTGGGTGTTTCT GTTGAATGTCCCTCCGGGCGCACTGGCTGGGATAGGGCTCGCTCTGGTCC TGCCCAATCGGTTCCCCTATCACAACGAACCATCCAAGGAGAAGACAATG TCATCCGTGCTGGCATCATTGCGGCAAATGATTCAGAGAGTCGACTTACT CGGCTCCAGCTTGCTGTTAGTTGCAACAATTCTCCTGGTAACGGCTTTGG AGGAAGCCAATGAGGAATACACTTGGAATTCGGCTTTTACCATTGTGCTG CTTATCATCTCCGGACTGGCGTGGATCGCCTTTCTACTGTGGGAAAGACG GGTGACACTCTATTCTAAGCACATTGAGCCGGTCTTTCCGTGGAGGTTCG TTTGTAACCGAGTCTGGGTCGGAATGTTGTTCTTGCCGTTTGTCTATTTC TAACTAATCTGGAAATCCCGATCGTGACAACCGCCTTGGTTCGAATCACC GGGGAATTGGGAGGTCTGAATAAAATATACTGGATTACTACAGCGTATAT GCTAGGATATGCCGGACTGCTTGTCATCTCGGCCAAGTTCAGCGACATAT TTGGCCGCAAGTCATGCCTACTGGTCGCTGTTTTTCTCTTCGTGGTGTTT TCCGGGGCTTGCGGGGCAGCCCAAACCATGGAGCAACTAAATTCCGTCTG TCTGGGGGCAGTGTGGTTCTCGACCATGTTCCAGTTACCCCAGCGGTTCC AAATCGTCAACCAGCTTACGGCTTTCCAAGCGGCTGTCCGATTCATCCCT TTCACCGTGGCGAGTCCCGTGGCATCCGTCCTGGCACCGGCTATCGGAAA AGTGTTCAAGATTCCGCTGCTATACCTGGTAATCTTCGCGTCTTTGCTGC AGGTGGTTGCTTACGTCCTTCTGGGCACTCTTCCCGACTCACTGTCGATC ACCTCGGCGCAGTATGGATACCAGGTCCTGGCCGGCTTCGGGTGTGGCAT CAACATCACCCTGCTGATCCTGATGACACCCTTCACGATCGAAAAGCGAG ACAATGCAGTCGCCATGGGGGCCATTACGCAGTTCCGAGTCATGGGTGGT TGCATTGGAATTTCTGTGCTGACGGCAGTGGCCAATGGTTACCTGCAGTC TCACTTGCAGCAATGGCTCACCCCGACCGAGATGCAGTTGGTCCTGCACT CCGCGGAAAGCCTTTCCACTCTCCCAGCGTCAGCACAAAGCCTAGTTCGC GGGACCTTCTCGGCCAGTTACAATCTGCAGATGAAAATTTTGGCGGGGTT CGCTGGGGGCCAGGTTCTGGCCTCGGTGCTTATGTGGCAGAGGGATCGTC TTTCGTGCTTTTCAGGGTGTTGGCGGAGCGGGCAACTATTCTCCCTGTGC TGCCATTCTGCTGGACCTGGTCCCGACAGAGAAATATGCGACGTACATGA GTTCACTATCCCTGGTATACGCGATATCCTTACTATTTGGACCTCTGATG GGAGGGGGTATCTCCGACTCGTCCACATGGCGCTGGGTGTTTCTGTTGAA TGTCCCTCCGGGCGCACTGGCTGGGATAGGGCTCGCTCTGGTCCTGCCCA ATCGGTTCCCCTATCACAACGAACCATCCAAGGAGAAGACAATGTCATCC GTGCTGGCATCATTGCGGCAAATGATTCAGAGAGTCGACTTACTCGGCTC CAGCTTGCTGTTAGTTGCAACAATTCTCCTGGTAACGGCTTTGGAGGAAG CCAATGAGGAATACACTTGGAATTCGGCTTTTACCATTGTGCTGCTTATC ATCTCCGGACTGGCGTGGATCGCCTTTCTACTGTGGGAAAGACGGGTGAC ACTCTATTCTAAGCACATTGAGCCGGTCTTTCCGTGGAGGTTCGTTTGTA ACCGAGTCTGGGTCGGAATGTTGTTCTTGCCGTTTGTCTATTTCTAACTA ATCTGGAAATCCCGATCGTGACAACCGCCTTGGTTCGAATCACCGGGGAA TTGGGAGGTCTGAATAAAATATACTGGATTACTACAGCGTATATGCTAGG ATATGCCGGACTGCTTGTCATCTCGGCCAAGTTCAGCGACATATTTGGCC GCAAGTCATGCCTACTGGTCGCTGTTTTTCTCTTCGTGGTGTTTTCCGGG GCTTGCGGGGCAGCCCAAACCATGGAGCAACT back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
Term | Definition |
GO:0016021 | integral component of membrane |
GO:0005887 | integral component of plasma membrane |
Vocabulary: Molecular Function
Term | Definition |
GO:0022857 | transmembrane transporter activity |
Vocabulary: Biological Process
Term | Definition |
GO:0055085 | transmembrane transport |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
Property Name | Value |
Note | antiSMASH:Cluster_10000181.2 |
Note | EggNog:ENOG41 |
Note | SMCOG1005: EmrB/QacA |
Note | SMCOG1005:Drug resistance transporter |
DBxref | InterPro:IPR036259 |
DBxref | InterPro:IPR020846 |
DBxref | InterPro:IPR005829 |
DBxref | InterPro:IPR011701 |
DBxref | PFAM:PF07690 |
Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
ACJE01000018.1 | supercontig | ACJE01000018.1:120226..121844 - |
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