You are here

Home

ASPNIDRAFT_133134-T1, ASPNIDRAFT_133134-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_133134-T1
Unique NameASPNIDRAFT_133134-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000004.1:2180233..2181133-

Legend: polypeptideCDSexonthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_133134-T1 ID=ASPNIDRAFT_133134-T1|Name=ASPNIDRAFT_133134-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=901bp|location=Sequence derived from alignment at ACJE01000004.1:2180233..2181133- (Aspergillus niger ATCC 1015)
TACAACAATGCAGTCAAGGAATACTGGAACGGCGTGAATGCTGACAACCG
TCCGGCCTGCGCCTTTTTCCCTGCAAACGCGCAACATGTCTCCGTCGCAG
TTCAGCAGCTGAACAAATATCCCACTGCACCCTTTGCATTGAAAGGAGGC
GGTCACAATTTCAATGTGGGACTCTCAAGTACCAACGGGGGGGTCCTTAT
CTCGTTCAATGAGAACCTGTCCTCAACCACGCGTAACTCAGACGGCCAGA
CTTTCGACGTCGGCCCTGGAGCCCGATGGGGCGATGTCTACGCTGTCACG
GAGAAGACGAACCAGGTCGTCGTAGGCGGCCGATTGGCTAATATCGGCGT
GGCAGGATTCACGATTGGAGGGGGATTGTCATACTACTCAGCTCAATATG
TACTACCTTGCCCTATCCCTCCTCCGCCCCCTTTCCTCTACGTCCAGCAC
TAACCCAACTCAGGGCTTATCCTGCGACAACGTGGTCAAGTTCGAAGTAG
TCCTAGCAAACGGCACCATCGTCAACGCGAACAGCACCTCTAATCCAGAC
CTCTGGTGGGCCTTGCGCGGCGGCGGCAACCGCTATGGCATCGTTACCAA
GTTCACATACCAGGGTCACCCACTCGGCGACAACGGGCAAGTCTGGGGCG
GCATTCGCTTTTACAGCGCCGACAAACGCCAGCAAATCTTTGAAGCTCTC
TCCAACTTCACAAGTGAATACCCGGACGCCAAAGCCGCCGTCATCCCAAC
CTTCGACTTTGGCTTGCCTGGAGCGATAGTCTCCAACCCAGCCGTTTTCT
TCTTCTACGATGGAGCGAAGCCCAGCACTAACGCCTTCGTCGGACTCGAC
AACATCGAAGCCCTTATCGACTCTACTAAGACCACCACCTACACCGATCT
A
back to top

Coding sequence (CDS) from alignment at ACJE01000004.1:2180233..2181133-

>ASPNIDRAFT_133134-T1 ID=ASPNIDRAFT_133134-T1|Name=ASPNIDRAFT_133134-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=1672bp|location=Sequence derived from alignment at ACJE01000004.1:2180233..2181133- (Aspergillus niger ATCC 1015)
GGCTTATCCTGCGACAACGTGGTCAAGTTCGAAGTAGTCCTAGCAAACGG
CACCATCGTCAACGCGAACAGCACCTCTAATCCAGACCTCTGGTGGGCCT
TGCGCGGCGGCGGCAACCGCTATGGCATCGTTACCAAGTTCACATACCAG
GGTCACCCACTCGGCGACAACGGGCAAGTCTGGGGCGGCATTCGCTTTTA
CAGCGCCGACAAACGCCAGCAAATCTTTGAAGCTCTCTCCAACTTCACAA
GTGAATACCCGGACGCCAAAGCCGCCGTCATCCCAACCTTCGACTTTGGC
TTGCCTGGAGCGATAGTCTCCAACCCAGCCGTTTTCTTCTTCTACGATGG
AGCGAAGCCCAGCACTAACGCCTTCGTCGGACTCGACAACATCGAAGCCC
TTATCGACTCTACTAAGACCACCACCTACACCGATCTTACAACAATGCAG
TCAAGGAATACTGGAACGGCGTGAATGCTGACAACCGTCCGGCCTGCGCC
TTTTTCCCTGCAAACGCGCAACATGTCTCCGTCGCAGTTCAGCAGCTGAA
CAAATATCCCACTGCACCCTTTGCATTGAAAGGAGGCGGTCACAATTTCA
ATGTGGGACTCTCAAGTACCAACGGGGGGGTCCTTATCTCGTTCAATGAG
AACCTGTCCTCAACCACGCGTAACTCAGACGGCCAGACTTTCGACGTCGG
CCCTGGAGCCCGATGGGGCGATGTCTACGCTGTCACGGAGAAGACGAACC
AGGTCGTCGTAGGCGGCCGATTGGCTAATATCGGCGTGGCAGGATTCACG
ATTGGAGGGGGATTGTCATACTACTCAGCTCAATATGGCTTATCCTGCGA
CAACGTGGTCAAGTTCGAAGTAGTCCTAGCAAACGGCACCATCGTCAACG
CGAACAGCACCTCTAATCCAGACCTCTGGTGGGCCTTGCGCGGCGGCGGC
AACCGCTATGGCATCGTTACCAAGTTCACATACCAGGGTCACCCACTCGG
CGACAACGGGCAAGTCTGGGGCGGCATTCGCTTTTACAGCGCCGACAAAC
GCCAGCAAATCTTTGAAGCTCTCTCCAACTTCACAAGTGAATACCCGGAC
GCCAAAGCCGCCGTCATCCCAACCTTCGACTTTGGCTTGCCTGGAGCGAT
AGTCTCCAACCCAGCCGTTTTCTTCTTCTACGATGGAGCGAAGCCCAGCA
CTAACGCCTTCGTCGGACTCGACAACATCGAAGCCCTTATCGACTCTACT
AAGACCACCACCTACACCGATCTTACAACAATGCAGTCAAGGAATACTGG
AACGGCGTGAATGCTGACAACCGTCCGGCCTGCGCCTTTTTCCCTGCAAA
CGCGCAACATGTCTCCGTCGCAGTTCAGCAGCTGAACAAATATCCCACTG
CACCCTTTGCATTGAAAGGAGGCGGTCACAATTTCAATGTGGGACTCTCA
AGTACCAACGGGGGGGTCCTTATCTCGTTCAATGAGAACCTGTCCTCAAC
CACGCGTAACTCAGACGGCCAGACTTTCGACGTCGGCCCTGGAGCCCGAT
GGGGCGATGTCTACGCTGTCACGGAGAAGACGAACCAGGTCGTCGTAGGC
GGCCGATTGGCTAATATCGGCGTGGCAGGATTCACGATTGGAGGGGGATT
GTCATACTACTCAGCTCAATAT
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0055114oxidation-reduction process
Vocabulary: Molecular Function
TermDefinition
GO:0071949FAD binding
GO:0016491oxidoreductase activity
GO:0050660flavin adenine dinucleotide binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ASPNIDRAFT_133134ASPNIDRAFT_133134Aspergillus niger ATCC 1015gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_133134-T1ASPNIDRAFT_133134-T1-proteinAspergillus niger ATCC 1015polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_133134-T1.cdsASPNIDRAFT_133134-T1.cdsAspergillus niger ATCC 1015CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_133134-T1.utr3p1ASPNIDRAFT_133134-T1.utr3p1Aspergillus niger ATCC 1015three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_133134-T1.exon2ASPNIDRAFT_133134-T1.exon2Aspergillus niger ATCC 1015exon
ASPNIDRAFT_133134-T1.exon1ASPNIDRAFT_133134-T1.exon1Aspergillus niger ATCC 1015exon


Properties
Property NameValue
NoteEggNog:ENOG41
NoteCAZy:AA7
DBxrefInterPro:IPR036318
DBxrefInterPro:IPR016166
DBxrefInterPro:IPR006094
DBxrefPFAM:PF01565
ProductFAD/FMN-containing dehydrogenase
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000004.1supercontigACJE01000004.1:2180233..2181133 -
Powered by Drupal