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ASPNIDRAFT_134215-T1, ASPNIDRAFT_134215-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_134215-T1
Unique NameASPNIDRAFT_134215-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000004.1:944017..945264+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_134215-T1 ID=ASPNIDRAFT_134215-T1|Name=ASPNIDRAFT_134215-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=1248bp|location=Sequence derived from alignment at ACJE01000004.1:944017..945264+ (Aspergillus niger ATCC 1015)
ATGCCCCCCTCCCCCTGCGCCCGCTGCCACGACCAACGGGCAGTAATCAT
ACGGCCCAAGAACCGGCAAAAGCTCTGCCGCACCTGCTTCCTGCACGTCT
TCGAGACCGAAGTCCACGAAACCATCACCTCGACCTCTCTCTTCCACCCC
GGCGAACGAGTCGCCATCGGCGCCAGCGGCGGCAAAGACAGCACCGTCCT
GGCCGCCGTCCTCAAGACCCTCAACGAACGCTACAACTATGGACTCGACC
TATGCCTCCTCTCCATCGACGAAGGCATCAAGGGTTACCGCGACGACAGT
CTCGAGACCGTGAAACGCAACGCCCAACAATACAACATGCCGCTCGTAAT
CGTCAGCTACGGCGACCTGTACGGCTGGACAATGGACCAGGTGGTGGCGC
AGGTCGGCAAAAAGGGCAACTGCACATACTGCGGGGTATTTCGGCGGCAG
GCGCTGGATCGCGGGGCCGCGAAACTGGGCATTAAGCATGTGGTGACGGG
TCATAATGCGGATGATGTGGCGGAGACAGTGATGATGAATTTGCTGAGAG
GGGATTTGCCGCGCTTGTCGCGGGGCACGAGTATTGTGACGGGGTCCGCC
GCCAGTGATATTAAGAGGAGTAAGCCGTTGAAGTATGCTTATGAGAAGGA
GATCGTGCTGTATGCGCATCATCGCCAGTTGGATTATTTCTCTACGGAGT
GTATCTATTCGCCTGAGGCGTTTCGGGGTAGTGCGAGGACGTTGATTAAG
GATTTGGAGAAGATTAGGCCGTCGTCGATTTTGGATATTGTTAAGTCTGG
GGAGGATATGGCGCTTCTGGTGCCCACTGAGGTTAGGGGGAAGGGGGCTG
AGGATGAGGAGGGCGGTGGTGGTGGTGGGTGTGGGAGTCAGAATGGGCGG
ACGAGGGGTGGTGAGATGGCGGAGATGGAGAGGAAGTTGAAGGAGGATGA
GGCTGCCAAAGATAGGGAGATGGAGATTACTTCTGACAGCTTGTCTAGGA
GGCAGCAGCAGCAGTTGGAGCAGATGCAGACGCCGGCTCAGAAGAAGGTC
AAGTCGCAGGTACTGGGGACGTGTGAGCGCTGCGGTTATATCTCCAGTCA
GCGCGTGTGCAAGGCATGTACGCTTCTGGAGGGATTGAATAAGAATCGGC
CCAAGACGGCGATTGAGATGGAGATTGGTTTGGAAGATGAGGAGAGCAGC
TCGACGTTGCGCAGGCAGATGGAGAAGGTTGAGCTGGGGGGTGTTTGA
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Coding sequence (CDS) from alignment at ACJE01000004.1:944017..945264+

>ASPNIDRAFT_134215-T1 ID=ASPNIDRAFT_134215-T1|Name=ASPNIDRAFT_134215-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=1248bp|location=Sequence derived from alignment at ACJE01000004.1:944017..945264+ (Aspergillus niger ATCC 1015)
ATGCCCCCCTCCCCCTGCGCCCGCTGCCACGACCAACGGGCAGTAATCAT
ACGGCCCAAGAACCGGCAAAAGCTCTGCCGCACCTGCTTCCTGCACGTCT
TCGAGACCGAAGTCCACGAAACCATCACCTCGACCTCTCTCTTCCACCCC
GGCGAACGAGTCGCCATCGGCGCCAGCGGCGGCAAAGACAGCACCGTCCT
GGCCGCCGTCCTCAAGACCCTCAACGAACGCTACAACTATGGACTCGACC
TATGCCTCCTCTCCATCGACGAAGGCATCAAGGGTTACCGCGACGACAGT
CTCGAGACCGTGAAACGCAACGCCCAACAATACAACATGCCGCTCGTAAT
CGTCAGCTACGGCGACCTGTACGGCTGGACAATGGACCAGGTGGTGGCGC
AGGTCGGCAAAAAGGGCAACTGCACATACTGCGGGGTATTTCGGCGGCAG
GCGCTGGATCGCGGGGCCGCGAAACTGGGCATTAAGCATGTGGTGACGGG
TCATAATGCGGATGATGTGGCGGAGACAGTGATGATGAATTTGCTGAGAG
GGGATTTGCCGCGCTTGTCGCGGGGCACGAGTATTGTGACGGGGTCCGCC
GCCAGTGATATTAAGAGGAGTAAGCCGTTGAAGTATGCTTATGAGAAGGA
GATCGTGCTGTATGCGCATCATCGCCAGTTGGATTATTTCTCTACGGAGT
GTATCTATTCGCCTGAGGCGTTTCGGGGTAGTGCGAGGACGTTGATTAAG
GATTTGGAGAAGATTAGGCCGTCGTCGATTTTGGATATTGTTAAGTCTGG
GGAGGATATGGCGCTTCTGGTGCCCACTGAGGTTAGGGGGAAGGGGGCTG
AGGATGAGGAGGGCGGTGGTGGTGGTGGGTGTGGGAGTCAGAATGGGCGG
ACGAGGGGTGGTGAGATGGCGGAGATGGAGAGGAAGTTGAAGGAGGATGA
GGCTGCCAAAGATAGGGAGATGGAGATTACTTCTGACAGCTTGTCTAGGA
GGCAGCAGCAGCAGTTGGAGCAGATGCAGACGCCGGCTCAGAAGAAGGTC
AAGTCGCAGGTACTGGGGACGTGTGAGCGCTGCGGTTATATCTCCAGTCA
GCGCGTGTGCAAGGCATGTACGCTTCTGGAGGGATTGAATAAGAATCGGC
CCAAGACGGCGATTGAGATGGAGATTGGTTTGGAAGATGAGGAGAGCAGC
TCGACGTTGCGCAGGCAGATGGAGAAGGTTGAGCTGGGGGGTGTTTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0000049tRNA binding
Vocabulary: Biological Process
TermDefinition
GO:0034227tRNA thio-modification
GO:0002098tRNA wobble uridine modification
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
NCS6ASPNIDRAFT_134215Aspergillus niger ATCC 1015gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_134215-T1.exon1ASPNIDRAFT_134215-T1.exon1Aspergillus niger ATCC 1015exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_134215-T1.cdsASPNIDRAFT_134215-T1.cdsAspergillus niger ATCC 1015CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_134215-T1ASPNIDRAFT_134215-T1-proteinAspergillus niger ATCC 1015polypeptide


Properties
Property NameValue
NoteBUSCO:EOG09262IZ6
DBxrefInterPro:IPR000541
DBxrefInterPro:IPR032442
DBxrefInterPro:IPR011063
DBxrefPFAM:PF16503
DBxrefPFAM:PF01171
Productnucleotidyltransferase
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000004.1supercontigACJE01000004.1:944017..945264 +
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