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ASPNIDRAFT_134540-T1, ASPNIDRAFT_134540-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_134540-T1
Unique NameASPNIDRAFT_134540-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000006.1:1530791..1532000-

Legend: polypeptideCDSexonthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_134540-T1 ID=ASPNIDRAFT_134540-T1|Name=ASPNIDRAFT_134540-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=1210bp|location=Sequence derived from alignment at ACJE01000006.1:1530791..1532000- (Aspergillus niger ATCC 1015)
ATGCCCGCGGTTGTCGAGGATATCACTCCGATAACAAGATCAGAAGGCAC
AGTCATGGAATCTTCCACTGCGGATAAGAAGCGCAACAAGCTTGGATATC
ATCGCACCTCTGTCGCATGTGGTAAGCTCTCGGTTCTCGGTGGTCTCCGT
TGGAATACTCATTTCTTATGCGACAGTACACTGTCGGCGGCGAAAGATCC
GATGTCTTGTTGCGCCAGACGATGCTCAAGGACGATGCGAGAATTGTATC
CGCCTCCGAAAGGAATGCCAGTTCTTCCCTGTCGACCAGCAGCCCCCGAT
TGAGAAGAAGTCACGTCCCAGTTCTCGTCTAGAAACCGCTTCGACGGACC
CGTCGACCGCTTCTTCGTCGCCACCGAATGTGACTGGGGTAGAGCAAGCG
GAGCCTTTCTTTACTTACCAACCCATGCCGTTGGGTTCGAATCCGGATGT
GGGAGCCTTCAATACTGCGACCTTTCCGAGTAACCCGATGGCACCATTTA
CTCCAGGTTTGTGGCTCTAACGAGCAGGAGGAATGTTGAATCATGAAGTG
TGTTGACCATTGCCTGAAACAGATCGCAGCGTCGGTGCGGACTTTGTAGC
GCCTCCTTCTATGGACCCCGGGGTTCCGTGGGACGAGTATACGACCATCA
CAGACCCTCAAATGTTAGCAGCTATGCCCGCGGGGAAAGCAATGATGAAT
ATGTCTTCGAACGTTTGGGGTGCGACACCCAATCCCATGGCACCGATGCC
AACCACTTCGCCCCTGCCAGGAACGCCCACAGTCCCGTCGCAGTCGCAAG
GTCTGGCACAAACACCCACGTATGCCATGCAGCCTGATGGGACGGTCTGG
CAAGTGCCCCCCCAACGCGCGATGACATTTTCGGCACAACCCGCAGACAT
GGCAATCCCGTATCCGAACCAAGGTCAATTCGTGCAGCCATCGCCTGCAG
ATCTTAAAAGAAGAATGACCAGCCCGGCCCAGTCTTTCCCCGGAACTCCG
ATCAACCCCCAGAGTCCTCCTGCAGCGGATCTACAGGCGGTGTCTGTCTC
ATACCCAGGCCAGCCGGCCGCTATGGGTTTCAACACCTGGCAGGATGTGA
ACAGCATGTCCCCCATGAGTGTGGTCCAGTACCCGATGTACACGAACGAC
CCAGCCCAGCAAGCAGGCTTTGGCAGCCCGCCACCGATGGGCCACCCCGG
TCCAGGCCAA
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Coding sequence (CDS) from alignment at ACJE01000006.1:1530791..1532000-

>ASPNIDRAFT_134540-T1 ID=ASPNIDRAFT_134540-T1|Name=ASPNIDRAFT_134540-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=3252bp|location=Sequence derived from alignment at ACJE01000006.1:1530791..1532000- (Aspergillus niger ATCC 1015)
CGTCGGTGCGGACTTTGTAGCGCCTCCTTCTATGGACCCCGGGGTTCCGT
GGGACGAGTATACGACCATCACAGACCCTCAAATGTTAGCAGCTATGCCC
GCGGGGAAAGCAATGATGAATATGTCTTCGAACGTTTGGGGTGCGACACC
CAATCCCATGGCACCGATGCCAACCACTTCGCCCCTGCCAGGAACGCCCA
CAGTCCCGTCGCAGTCGCAAGGTCTGGCACAAACACCCACGTATGCCATG
CAGCCTGATGGGACGGTCTGGCAAGTGCCCCCCCAACGCGCGATGACATT
TTCGGCACAACCCGCAGACATGGCAATCCCGTATCCGAACCAAGGTCAAT
TCGTGCAGCCATCGCCTGCAGATCTTAAAAGAAGAATGACCAGCCCGGCC
CAGTCTTTCCCCGGAACTCCGATCAACCCCCAGAGTCCTCCTGCAGCGGA
TCTACAGGCGGTGTCTGTCTCATACCCAGGCCAGCCGGCCGCTATGGGTT
TCAACACCTGGCAGGATGTGAACAGCATGTCCCCCATGAGTGTGGTCCAG
TACCCGATGTACACGAACGACCCAGCCCAGCAAGCAGGCTTTGGCAGCCC
GCCACCGATGGGCCACCCCGGTCCAGGCCTACACTGTCGGCGGCGAAAGA
TCCGATGTCTTGTTGCGCCAGACGATGCTCAAGGACGATGCGAGAATTGT
ATCCGCCTCCGAAAGGAATGCCAGTTCTTCCCTGTCGACCAGCAGCCCCC
GATTGAGAAGAAGTCACGTCCCAGTTCTCGTCTAGAAACCGCTTCGACGG
ACCCGTCGACCGCTTCTTCGTCGCCACCGAATGTGACTGGGGTAGAGCAA
GCGGAGCCTTTCTTTACTTACCAACCCATGCCGTTGGGTTCGAATCCGGA
TGTGGGAGCCTTCAATACTGCGACCTTTCCGAGTAACCCGATGGCACCAT
TTACTCCAGGTTTATGCCCGCGGTTGTCGAGGATATCACTCCGATAACAA
GATCAGAAGGCACAGTCATGGAATCTTCCACTGCGGATAAGAAGCGCAAC
AAGCTTGGATATCATCGCACCTCTGTCGCATGTGCGTCGGTGCGGACTTT
GTAGCGCCTCCTTCTATGGACCCCGGGGTTCCGTGGGACGAGTATACGAC
CATCACAGACCCTCAAATGTTAGCAGCTATGCCCGCGGGGAAAGCAATGA
TGAATATGTCTTCGAACGTTTGGGGTGCGACACCCAATCCCATGGCACCG
ATGCCAACCACTTCGCCCCTGCCAGGAACGCCCACAGTCCCGTCGCAGTC
GCAAGGTCTGGCACAAACACCCACGTATGCCATGCAGCCTGATGGGACGG
TCTGGCAAGTGCCCCCCCAACGCGCGATGACATTTTCGGCACAACCCGCA
GACATGGCAATCCCGTATCCGAACCAAGGTCAATTCGTGCAGCCATCGCC
TGCAGATCTTAAAAGAAGAATGACCAGCCCGGCCCAGTCTTTCCCCGGAA
CTCCGATCAACCCCCAGAGTCCTCCTGCAGCGGATCTACAGGCGGTGTCT
GTCTCATACCCAGGCCAGCCGGCCGCTATGGGTTTCAACACCTGGCAGGA
TGTGAACAGCATGTCCCCCATGAGTGTGGTCCAGTACCCGATGTACACGA
ACGACCCAGCCCAGCAAGCAGGCTTTGGCAGCCCGCCACCGATGGGCCAC
CCCGGTCCAGGCCTACACTGTCGGCGGCGAAAGATCCGATGTCTTGTTGC
GCCAGACGATGCTCAAGGACGATGCGAGAATTGTATCCGCCTCCGAAAGG
AATGCCAGTTCTTCCCTGTCGACCAGCAGCCCCCGATTGAGAAGAAGTCA
CGTCCCAGTTCTCGTCTAGAAACCGCTTCGACGGACCCGTCGACCGCTTC
TTCGTCGCCACCGAATGTGACTGGGGTAGAGCAAGCGGAGCCTTTCTTTA
CTTACCAACCCATGCCGTTGGGTTCGAATCCGGATGTGGGAGCCTTCAAT
ACTGCGACCTTTCCGAGTAACCCGATGGCACCATTTACTCCAGGTTTATG
CCCGCGGTTGTCGAGGATATCACTCCGATAACAAGATCAGAAGGCACAGT
CATGGAATCTTCCACTGCGGATAAGAAGCGCAACAAGCTTGGATATCATC
GCACCTCTGTCGCATGTGCGTCGGTGCGGACTTTGTAGCGCCTCCTTCTA
TGGACCCCGGGGTTCCGTGGGACGAGTATACGACCATCACAGACCCTCAA
ATGTTAGCAGCTATGCCCGCGGGGAAAGCAATGATGAATATGTCTTCGAA
CGTTTGGGGTGCGACACCCAATCCCATGGCACCGATGCCAACCACTTCGC
CCCTGCCAGGAACGCCCACAGTCCCGTCGCAGTCGCAAGGTCTGGCACAA
ACACCCACGTATGCCATGCAGCCTGATGGGACGGTCTGGCAAGTGCCCCC
CCAACGCGCGATGACATTTTCGGCACAACCCGCAGACATGGCAATCCCGT
ATCCGAACCAAGGTCAATTCGTGCAGCCATCGCCTGCAGATCTTAAAAGA
AGAATGACCAGCCCGGCCCAGTCTTTCCCCGGAACTCCGATCAACCCCCA
GAGTCCTCCTGCAGCGGATCTACAGGCGGTGTCTGTCTCATACCCAGGCC
AGCCGGCCGCTATGGGTTTCAACACCTGGCAGGATGTGAACAGCATGTCC
CCCATGAGTGTGGTCCAGTACCCGATGTACACGAACGACCCAGCCCAGCA
AGCAGGCTTTGGCAGCCCGCCACCGATGGGCCACCCCGGTCCAGGCCTAC
ACTGTCGGCGGCGAAAGATCCGATGTCTTGTTGCGCCAGACGATGCTCAA
GGACGATGCGAGAATTGTATCCGCCTCCGAAAGGAATGCCAGTTCTTCCC
TGTCGACCAGCAGCCCCCGATTGAGAAGAAGTCACGTCCCAGTTCTCGTC
TAGAAACCGCTTCGACGGACCCGTCGACCGCTTCTTCGTCGCCACCGAAT
GTGACTGGGGTAGAGCAAGCGGAGCCTTTCTTTACTTACCAACCCATGCC
GTTGGGTTCGAATCCGGATGTGGGAGCCTTCAATACTGCGACCTTTCCGA
GTAACCCGATGGCACCATTTACTCCAGGTTTATGCCCGCGGTTGTCGAGG
ATATCACTCCGATAACAAGATCAGAAGGCACAGTCATGGAATCTTCCACT
GCGGATAAGAAGCGCAACAAGCTTGGATATCATCGCACCTCTGTCGCATG
TG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
Vocabulary: Molecular Function
TermDefinition
GO:0008270zinc ion binding
GO:0000981DNA-binding transcription factor activity, RNA polymerase II-specific
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ASPNIDRAFT_134540ASPNIDRAFT_134540Aspergillus niger ATCC 1015gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_134540-T1ASPNIDRAFT_134540-T1-proteinAspergillus niger ATCC 1015polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_134540-T1.cdsASPNIDRAFT_134540-T1.cdsAspergillus niger ATCC 1015CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_134540-T1.utr3p1ASPNIDRAFT_134540-T1.utr3p1Aspergillus niger ATCC 1015three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_134540-T1.exon3ASPNIDRAFT_134540-T1.exon3Aspergillus niger ATCC 1015exon
ASPNIDRAFT_134540-T1.exon2ASPNIDRAFT_134540-T1.exon2Aspergillus niger ATCC 1015exon
ASPNIDRAFT_134540-T1.exon1ASPNIDRAFT_134540-T1.exon1Aspergillus niger ATCC 1015exon


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR036864
DBxrefInterPro:IPR001138
DBxrefPFAM:PF00172
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000006.1supercontigACJE01000006.1:1530791..1532000 -
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