You are here

Home

ASPNIDRAFT_135590-T1, ASPNIDRAFT_135590-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_135590-T1
Unique NameASPNIDRAFT_135590-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000014.1:557438..558583+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_135590-T1 ID=ASPNIDRAFT_135590-T1|Name=ASPNIDRAFT_135590-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=1146bp|location=Sequence derived from alignment at ACJE01000014.1:557438..558583+ (Aspergillus niger ATCC 1015)
GACGACGAAGAGGAGGACTACATGTCCATGATCATCGAAGAGCCCCAGCA
GAAGGAAACCTTTGCGCAAAAGAAGAAGCGCCAGCAACGTGAGGTAGGCT
TTTCAGGCAAATATCCGTTCAGATTCAGCTTCAGCTCCACCTAACCTTTC
TCTTAATCGCAGGCCGAAGCGCGAGCCAAAGTCCCTTCCAAAGCCGAACG
CGCCGCTCAAGAAGCTGCCCGTCGCGATGCCGCCTTATCAACCAGCACGC
TCGACCCTTCCAACAAAGGGTTTCAAATGATGGCCAAGCTGGGATTCAAG
CCGGGCCAAGTACTCGGAAAACCTACCGCGCCATCACAAGATAGTGAGAA
GGACACCAAGGATCCCCAAGATCGAATTCGGTCTGAGCCCCTTAATCTCA
TCTTCAAGGAAGACCGAGGAGGAATCGGTCTCGACTCGGAGCGAAAACGG
AAGTTCCTCGAAGAAGCTGCGGAAGTAACCAAGAAGGTCAAGCAAGAAGA
GGGCGATTACCGCGACCGCGTCCGGTTGGAGCGCGAGACACGACGGCTCG
AGGCCCAATTCTATGCGGGGCAGAAGGTGGCTGAGCGCTTAGATGCGGAG
GCCGAGGGGGAAGGGGAGATAGAGCCACCACCAACTGAGACCAACGGAGA
AGAGAAAGAGGAGCAAGAATCGCATGCGATACCGGATGTGGAAGGCGAAG
AGCCACAGACAGATACCTCCACATCAACTACAAAGAAAGCTAAGAGGCCC
GTCAAACCAACATCTCAGATCAACATTCTCTACCGGGGGTTGGTGCGCGA
GCGGCAAGAAAAGGAGCGCGCCGTGCAGACACGCCACATGTTGCAGACAT
CGCTGCCGTCATCGTTCTTCCCGAACCCTCGATTGCCGGGCTATGAAGAC
TCGACGCTCGACCCTGAGGACCATGAGGCGCTGGGAGGCCGCCGAGAGAT
GTCCTCCATTCTTGAACAGGAGCTAGAAGAAGAGGATCCAGAACTGGAGG
AATTCAACGCGCTGGAGCCAGGCGAACGACTGGGCCGGCTGGTTCAATAT
TTGCGGGAAAAACACCACTACTGCTTCTGGTGCAAGTATCGCTACGAGAC
CGCCGAGATGGAAGGATGTCCCGGCGTGACGGAGGAGGATCATGAC
back to top

Coding sequence (CDS) from alignment at ACJE01000014.1:557438..558583+

>ASPNIDRAFT_135590-T1 ID=ASPNIDRAFT_135590-T1|Name=ASPNIDRAFT_135590-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=2154bp|location=Sequence derived from alignment at ACJE01000014.1:557438..558583+ (Aspergillus niger ATCC 1015)
GACGACGAAGAGGAGGACTACATGTCCATGATCATCGAAGAGCCCCAGCA
GAAGGAAACCTTTGCGCAAAAGAAGAAGCGCCAGCAACGTGAGGCCGAAG
CGCGAGCCAAAGTCCCTTCCAAAGCCGAACGCGCCGCTCAAGAAGCTGCC
CGTCGCGATGCCGCCTTATCAACCAGCACGCTCGACCCTTCCAACAAAGG
GTTTCAAATGATGGCCAAGCTGGGATTCAAGCCGGGCCAAGTACTCGGAA
AACCTACCGCGCCATCACAAGATAGTGAGAAGGACACCAAGGATCCCCAA
GATCGAATTCGGTCTGAGCCCCTTAATCTCATCTTCAAGGAAGACCGAGG
AGGAATCGGTCTCGACTCGGAGCGAAAACGGAAGTTCCTCGAAGAAGCTG
CGGAAGTAACCAAGAAGGTCAAGCAAGAAGAGGGCGATTACCGCGACCGC
GTCCGGTTGGAGCGCGAGACACGACGGCTCGAGGCCCAATTCTATGCGGG
GCAGAAGGTGGCTGAGCGCTTAGATGCGGAGGCCGAGGGGGAAGGGGAGA
TAGAGCCACCACCAACTGAGACCAACGGAGAAGAGAAAGAGGAGCAAGAA
TCGCATGCGATACCGGATGTGGAAGGCGAAGAGCCACAGACAGATACCTC
CACATCAACTACAAAGAAAGCTAAGAGGCCCGTCAAACCAACATCTCAGA
TCAACATTCTCTACCGGGGGTTGGTGCGCGAGCGGCAAGAAAAGGAGCGC
GCCGTGCAGACACGCCACATGTTGCAGACATCGCTGCCGTCATCGTTCTT
CCCGAACCCTCGATTGCCGGGCTATGAAGACTCGACGCTCGACCCTGAGG
ACCATGAGGCGCTGGGAGGCCGCCGAGAGATGTCCTCCATTCTTGAACAG
GAGCTAGAAGAAGAGGATCCAGAACTGGAGGAATTCAACGCGCTGGAGCC
AGGCGAACGACTGGGCCGGCTGGTTCAATATTTGCGGGAAAAACACCACT
ACTGCTTCTGGTGCAAGTATCGCTACGAGACCGCCGAGATGGAAGGATGT
CCCGGCGTGACGGAGGAGGATCATGACGACGACGAAGAGGAGGACTACAT
GTCCATGATCATCGAAGAGCCCCAGCAGAAGGAAACCTTTGCGCAAAAGA
AGAAGCGCCAGCAACGTGAGGCCGAAGCGCGAGCCAAAGTCCCTTCCAAA
GCCGAACGCGCCGCTCAAGAAGCTGCCCGTCGCGATGCCGCCTTATCAAC
CAGCACGCTCGACCCTTCCAACAAAGGGTTTCAAATGATGGCCAAGCTGG
GATTCAAGCCGGGCCAAGTACTCGGAAAACCTACCGCGCCATCACAAGAT
AGTGAGAAGGACACCAAGGATCCCCAAGATCGAATTCGGTCTGAGCCCCT
TAATCTCATCTTCAAGGAAGACCGAGGAGGAATCGGTCTCGACTCGGAGC
GAAAACGGAAGTTCCTCGAAGAAGCTGCGGAAGTAACCAAGAAGGTCAAG
CAAGAAGAGGGCGATTACCGCGACCGCGTCCGGTTGGAGCGCGAGACACG
ACGGCTCGAGGCCCAATTCTATGCGGGGCAGAAGGTGGCTGAGCGCTTAG
ATGCGGAGGCCGAGGGGGAAGGGGAGATAGAGCCACCACCAACTGAGACC
AACGGAGAAGAGAAAGAGGAGCAAGAATCGCATGCGATACCGGATGTGGA
AGGCGAAGAGCCACAGACAGATACCTCCACATCAACTACAAAGAAAGCTA
AGAGGCCCGTCAAACCAACATCTCAGATCAACATTCTCTACCGGGGGTTG
GTGCGCGAGCGGCAAGAAAAGGAGCGCGCCGTGCAGACACGCCACATGTT
GCAGACATCGCTGCCGTCATCGTTCTTCCCGAACCCTCGATTGCCGGGCT
ATGAAGACTCGACGCTCGACCCTGAGGACCATGAGGCGCTGGGAGGCCGC
CGAGAGATGTCCTCCATTCTTGAACAGGAGCTAGAAGAAGAGGATCCAGA
ACTGGAGGAATTCAACGCGCTGGAGCCAGGCGAACGACTGGGCCGGCTGG
TTCAATATTTGCGGGAAAAACACCACTACTGCTTCTGGTGCAAGTATCGC
TACGAGACCGCCGAGATGGAAGGATGTCCCGGCGTGACGGAGGAGGATCA
TGAC
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ASPNIDRAFT_135590ASPNIDRAFT_135590Aspergillus niger ATCC 1015gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_135590-T1.exon1ASPNIDRAFT_135590-T1.exon1Aspergillus niger ATCC 1015exon
ASPNIDRAFT_135590-T1.exon2ASPNIDRAFT_135590-T1.exon2Aspergillus niger ATCC 1015exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_135590-T1.cdsASPNIDRAFT_135590-T1.cdsAspergillus niger ATCC 1015CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_135590-T1ASPNIDRAFT_135590-T1-proteinAspergillus niger ATCC 1015polypeptide


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR025239
DBxrefInterPro:IPR000467
DBxrefPFAM:PF01585
DBxrefPFAM:PF13821
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000014.1supercontigACJE01000014.1:557438..558583 +
Powered by Drupal