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ASPNIDRAFT_136603-T1, ASPNIDRAFT_136603-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_136603-T1
Unique NameASPNIDRAFT_136603-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000016.1:1812540..1813426-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_136603-T1 ID=ASPNIDRAFT_136603-T1|Name=ASPNIDRAFT_136603-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=887bp|location=Sequence derived from alignment at ACJE01000016.1:1812540..1813426- (Aspergillus niger ATCC 1015)
ATGCCCTCAGCGACAGGAACCAAGCGTGTCAGAGTGAGTTCATCCCTCTT
TAAGATTATACACCAGACCGACCGATTAATCCATTACTATACAGGGCGTT
TCTGTCTTCCGGCCATTCGGTATGCCTCTACTTACCATTATTCCCCATAT
TTGAAACTTAATCCGGTCCTAACAACCCACCAGTCTTCGGCAGCGAAGCC
CAACCCTTCGACCCAGCCAAGAAACCCCCCAACGTCCCAGCCGACCACAC
GCACCAGTGGCGCGTATTCGTCAAAGGCGTCAACGGCGAAGACATCTCCT
ACTGGCTAAAGAAAGTGCAATTTAAGCTCCACGAGACTTACGCACAGAAC
GTGCGGACGATCGAACAGGCCCCCTTCGAAGTCACCGAGACCGGATGGGG
TGAATTCGAGATTCAAATCAAGCTATATTTTGTTCCGGAATCGACCGAGA
AGCCGCAGACTCTATGGCATAGTTTGAAGTTGCACCCCTATGGGCCGGAC
GCGGAAGCGAAGAAGGAGCGCCGCGAGCTGGTAATCAGTCAGAACTATGA
GGAGGTGGTGTTCAATGAGCCTGTGGAGCAGTTTTATGAGCTCTTGACGG
GTGGTACGGGCGCAGCAGGGCAACCGCAGAAGGGGAAGGGTGGCAAGAAT
ACCAAGCAGGCGCAGCAGCAGCAGAAGGGGGTAAGGACGGCTGAGATTCC
GGTTAATTCGTCCGCGGACAATCCGTATAGTCGGACGACGGAGAGTAGTG
AAATGGATCGGTTAGGGGAGGCGAATAAGACAGTCGAGCAGATGATCAAA
CAGGAGAGGGAACGATTGATTGAGCGGGAGAAGAGGTTGGCGGAATTGCG
TGCGAGTGAGGGCGTGCCGGCTACTACGAAGAAGCGT
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Coding sequence (CDS) from alignment at ACJE01000016.1:1812540..1813426-

>ASPNIDRAFT_136603-T1 ID=ASPNIDRAFT_136603-T1|Name=ASPNIDRAFT_136603-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=2286bp|location=Sequence derived from alignment at ACJE01000016.1:1812540..1813426- (Aspergillus niger ATCC 1015)
TCTTCGGCAGCGAAGCCCAACCCTTCGACCCAGCCAAGAAACCCCCCAAC
GTCCCAGCCGACCACACGCACCAGTGGCGCGTATTCGTCAAAGGCGTCAA
CGGCGAAGACATCTCCTACTGGCTAAAGAAAGTGCAATTTAAGCTCCACG
AGACTTACGCACAGAACGTGCGGACGATCGAACAGGCCCCCTTCGAAGTC
ACCGAGACCGGATGGGGTGAATTCGAGATTCAAATCAAGCTATATTTTGT
TCCGGAATCGACCGAGAAGCCGCAGACTCTATGGCATAGTTTGAAGTTGC
ACCCCTATGGGCCGGACGCGGAAGCGAAGAAGGAGCGCCGCGAGCTGGTA
ATCAGTCAGAACTATGAGGAGGTGGTGTTCAATGAGCCTGTGGAGCAGTT
TTATGAGCTCTTGACGGGTGGTACGGGCGCAGCAGGGCAACCGCAGAAGG
GGAAGGGTGGCAAGAATACCAAGCAGGCGCAGCAGCAGCAGAAGGGGGTA
AGGACGGCTGAGATTCCGGTTAATTCGTCCGCGGACAATCCGTATAGTCG
GACGACGGAGAGTAGTGAAATGGATCGGTTAGGGGAGGCGAATAAGACAG
TCGAGCAGATGATCAAACAGGAGAGGGAACGATTGATTGAGCGGGAGAAG
AGGTTGGCGGAATTGCGTGCGAGTGAGGGCGTGCCGGCTACTACGAAGAA
GCGTGGCGTTTCTGTCTTCCGGCCATTCGATGCCCTCAGCGACAGGAACC
AAGCGTGTCAGATCTTCGGCAGCGAAGCCCAACCCTTCGACCCAGCCAAG
AAACCCCCCAACGTCCCAGCCGACCACACGCACCAGTGGCGCGTATTCGT
CAAAGGCGTCAACGGCGAAGACATCTCCTACTGGCTAAAGAAAGTGCAAT
TTAAGCTCCACGAGACTTACGCACAGAACGTGCGGACGATCGAACAGGCC
CCCTTCGAAGTCACCGAGACCGGATGGGGTGAATTCGAGATTCAAATCAA
GCTATATTTTGTTCCGGAATCGACCGAGAAGCCGCAGACTCTATGGCATA
GTTTGAAGTTGCACCCCTATGGGCCGGACGCGGAAGCGAAGAAGGAGCGC
CGCGAGCTGGTAATCAGTCAGAACTATGAGGAGGTGGTGTTCAATGAGCC
TGTGGAGCAGTTTTATGAGCTCTTGACGGGTGGTACGGGCGCAGCAGGGC
AACCGCAGAAGGGGAAGGGTGGCAAGAATACCAAGCAGGCGCAGCAGCAG
CAGAAGGGGGTAAGGACGGCTGAGATTCCGGTTAATTCGTCCGCGGACAA
TCCGTATAGTCGGACGACGGAGAGTAGTGAAATGGATCGGTTAGGGGAGG
CGAATAAGACAGTCGAGCAGATGATCAAACAGGAGAGGGAACGATTGATT
GAGCGGGAGAAGAGGTTGGCGGAATTGCGTGCGAGTGAGGGCGTGCCGGC
TACTACGAAGAAGCGTGGCGTTTCTGTCTTCCGGCCATTCGATGCCCTCA
GCGACAGGAACCAAGCGTGTCAGATCTTCGGCAGCGAAGCCCAACCCTTC
GACCCAGCCAAGAAACCCCCCAACGTCCCAGCCGACCACACGCACCAGTG
GCGCGTATTCGTCAAAGGCGTCAACGGCGAAGACATCTCCTACTGGCTAA
AGAAAGTGCAATTTAAGCTCCACGAGACTTACGCACAGAACGTGCGGACG
ATCGAACAGGCCCCCTTCGAAGTCACCGAGACCGGATGGGGTGAATTCGA
GATTCAAATCAAGCTATATTTTGTTCCGGAATCGACCGAGAAGCCGCAGA
CTCTATGGCATAGTTTGAAGTTGCACCCCTATGGGCCGGACGCGGAAGCG
AAGAAGGAGCGCCGCGAGCTGGTAATCAGTCAGAACTATGAGGAGGTGGT
GTTCAATGAGCCTGTGGAGCAGTTTTATGAGCTCTTGACGGGTGGTACGG
GCGCAGCAGGGCAACCGCAGAAGGGGAAGGGTGGCAAGAATACCAAGCAG
GCGCAGCAGCAGCAGAAGGGGGTAAGGACGGCTGAGATTCCGGTTAATTC
GTCCGCGGACAATCCGTATAGTCGGACGACGGAGAGTAGTGAAATGGATC
GGTTAGGGGAGGCGAATAAGACAGTCGAGCAGATGATCAAACAGGAGAGG
GAACGATTGATTGAGCGGGAGAAGAGGTTGGCGGAATTGCGTGCGAGTGA
GGGCGTGCCGGCTACTACGAAGAAGCGTGGCGTTTCTGTCTTCCGGCCAT
TCGATGCCCTCAGCGACAGGAACCAAGCGTGTCAGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
YAF9ASPNIDRAFT_136603Aspergillus niger ATCC 1015gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_136603-T1ASPNIDRAFT_136603-T1-proteinAspergillus niger ATCC 1015polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_136603-T1.cdsASPNIDRAFT_136603-T1.cdsAspergillus niger ATCC 1015CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_136603-T1.exon3ASPNIDRAFT_136603-T1.exon3Aspergillus niger ATCC 1015exon
ASPNIDRAFT_136603-T1.exon2ASPNIDRAFT_136603-T1.exon2Aspergillus niger ATCC 1015exon
ASPNIDRAFT_136603-T1.exon1ASPNIDRAFT_136603-T1.exon1Aspergillus niger ATCC 1015exon


Properties
Property NameValue
NoteBUSCO:EOG09262UTQ
DBxrefInterPro:IPR005033
DBxrefInterPro:IPR038704
DBxrefPFAM:PF03366
ProductNuA4 histone H4 acetyltransferase complex and the SWR1 complex subunit
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000016.1supercontigACJE01000016.1:1812540..1813426 -
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