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ASPNIDRAFT_136905-T1, ASPNIDRAFT_136905-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_136905-T1
Unique NameASPNIDRAFT_136905-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000020.1:1253074..1253924-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_136905-T1 ID=ASPNIDRAFT_136905-T1|Name=ASPNIDRAFT_136905-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=851bp|location=Sequence derived from alignment at ACJE01000020.1:1253074..1253924- (Aspergillus niger ATCC 1015)
ATGTGGTCTTGGTTCGGCGGATCCGCCGCTCAGAAGCGGAAAGATGCGCC
CAAGAATGCGATCCTCATGCTTCGCGAGCAGCTGGATATGCTCCAAAAGC
GCGAGAAGCATTTGGAGAATCTGATGGAGGAGCAGGATGCAATTGCTCGG
AAGAACGTAACGTCAAACAAGGCCGGTAGGTGACAGCAGAAAAACAGCAA
CTAGGCAACAACAAATGATGTCTAACGGGTTATTGATCTGTATAGCGGCT
AAGAACGCCCTTCGACGGAAGAAGGTTCATGAGAAGAACCTCGAACAGAC
GACGGCGCAGATCGTTCAGCTAGAACAGCAGATCTACTCGATTGAGGCGG
CGAATATCAACCAGGAGACTTTGAAGGCTATGGAGGCGGCTGGTGCGGCG
ATGGCGAAGATCCATGGCTCCATGACGCTTGATACGGTGGATCAGACAAT
GTATGTTGTTTCGTTACGGTATCATTTGAGTGATGGGAACACGGCAACTG
ACTATGGTCTAGGGATACACTTCGCGAACAGCACCAACTCAGCACCGAAA
TCGCACAAGCCATTACAAGCACCAATCTGGTCGACCAACCAGACGAGGCC
GATTTGGAAGAGGAACTCGAGGGCTTGGAGCAGGAGGCCATGGACGAGCG
GATGCTCAACACAGGTACGGTGCCGGTTGCAGACCAACTCAACCGTTTAC
CTCCTGCGGCAAATGGAGAAAGTAAGCCACTGTCCCTCCCTCTTTACTAT
GAAACTCTTCTAACGTACATGCAACAGTCAAATCCAAACCTCAGACCGAA
GAGGAAGACGAGGAAGCAGAACTGGAGAAGCTACGTGCGGAAATGGCCAT
G
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Coding sequence (CDS) from alignment at ACJE01000020.1:1253074..1253924-

>ASPNIDRAFT_136905-T1 ID=ASPNIDRAFT_136905-T1|Name=ASPNIDRAFT_136905-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=2193bp|location=Sequence derived from alignment at ACJE01000020.1:1253074..1253924- (Aspergillus niger ATCC 1015)
GGATACACTTCGCGAACAGCACCAACTCAGCACCGAAATCGCACAAGCCA
TTACAAGCACCAATCTGGTCGACCAACCAGACGAGGCCGATTTGGAAGAG
GAACTCGAGGGCTTGGAGCAGGAGGCCATGGACGAGCGGATGCTCAACAC
AGGTACGGTGCCGGTTGCAGACCAACTCAACCGTTTACCTCCTGCGGCAA
ATGGAGAAAGTAAGCCACTGTCCCTCCCTCTTTACTATGAAACTCTTCTA
ACGTACATGCAACAGTCAAATCCAAACCTCAGACCGAAGAGGAAGACGAG
GAAGCAGAACTGGAGAAGCTACGTGCGGAAATGGCCATGCGGCTAAGAAC
GCCCTTCGACGGAAGAAGGTTCATGAGAAGAACCTCGAACAGACGACGGC
GCAGATCGTTCAGCTAGAACAGCAGATCTACTCGATTGAGGCGGCGAATA
TCAACCAGGAGACTTTGAAGGCTATGGAGGCGGCTGGTGCGGCGATGGCG
AAGATCCATGGCTCCATGACGCTTGATACGGTGGATCAGACAATGTATGT
TGTTTCATGTGGTCTTGGTTCGGCGGATCCGCCGCTCAGAAGCGGAAAGA
TGCGCCCAAGAATGCGATCCTCATGCTTCGCGAGCAGCTGGATATGCTCC
AAAAGCGCGAGAAGCATTTGGAGAATCTGATGGAGGAGCAGGATGCAATT
GCTCGGAAGAACGTAACGTCAAACAAGGCCGGGATACACTTCGCGAACAG
CACCAACTCAGCACCGAAATCGCACAAGCCATTACAAGCACCAATCTGGT
CGACCAACCAGACGAGGCCGATTTGGAAGAGGAACTCGAGGGCTTGGAGC
AGGAGGCCATGGACGAGCGGATGCTCAACACAGGTACGGTGCCGGTTGCA
GACCAACTCAACCGTTTACCTCCTGCGGCAAATGGAGAAAGTAAGCCACT
GTCCCTCCCTCTTTACTATGAAACTCTTCTAACGTACATGCAACAGTCAA
ATCCAAACCTCAGACCGAAGAGGAAGACGAGGAAGCAGAACTGGAGAAGC
TACGTGCGGAAATGGCCATGCGGCTAAGAACGCCCTTCGACGGAAGAAGG
TTCATGAGAAGAACCTCGAACAGACGACGGCGCAGATCGTTCAGCTAGAA
CAGCAGATCTACTCGATTGAGGCGGCGAATATCAACCAGGAGACTTTGAA
GGCTATGGAGGCGGCTGGTGCGGCGATGGCGAAGATCCATGGCTCCATGA
CGCTTGATACGGTGGATCAGACAATGTATGTTGTTTCATGTGGTCTTGGT
TCGGCGGATCCGCCGCTCAGAAGCGGAAAGATGCGCCCAAGAATGCGATC
CTCATGCTTCGCGAGCAGCTGGATATGCTCCAAAAGCGCGAGAAGCATTT
GGAGAATCTGATGGAGGAGCAGGATGCAATTGCTCGGAAGAACGTAACGT
CAAACAAGGCCGGGATACACTTCGCGAACAGCACCAACTCAGCACCGAAA
TCGCACAAGCCATTACAAGCACCAATCTGGTCGACCAACCAGACGAGGCC
GATTTGGAAGAGGAACTCGAGGGCTTGGAGCAGGAGGCCATGGACGAGCG
GATGCTCAACACAGGTACGGTGCCGGTTGCAGACCAACTCAACCGTTTAC
CTCCTGCGGCAAATGGAGAAAGTAAGCCACTGTCCCTCCCTCTTTACTAT
GAAACTCTTCTAACGTACATGCAACAGTCAAATCCAAACCTCAGACCGAA
GAGGAAGACGAGGAAGCAGAACTGGAGAAGCTACGTGCGGAAATGGCCAT
GCGGCTAAGAACGCCCTTCGACGGAAGAAGGTTCATGAGAAGAACCTCGA
ACAGACGACGGCGCAGATCGTTCAGCTAGAACAGCAGATCTACTCGATTG
AGGCGGCGAATATCAACCAGGAGACTTTGAAGGCTATGGAGGCGGCTGGT
GCGGCGATGGCGAAGATCCATGGCTCCATGACGCTTGATACGGTGGATCA
GACAATGTATGTTGTTTCATGTGGTCTTGGTTCGGCGGATCCGCCGCTCA
GAAGCGGAAAGATGCGCCCAAGAATGCGATCCTCATGCTTCGCGAGCAGC
TGGATATGCTCCAAAAGCGCGAGAAGCATTTGGAGAATCTGATGGAGGAG
CAGGATGCAATTGCTCGGAAGAACGTAACGTCAAACAAGGCCG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0007034vacuolar transport
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
SNF7ASPNIDRAFT_136905Aspergillus niger ATCC 1015gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_136905-T1ASPNIDRAFT_136905-T1-proteinAspergillus niger ATCC 1015polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_136905-T1.cdsASPNIDRAFT_136905-T1.cdsAspergillus niger ATCC 1015CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_136905-T1.exon3ASPNIDRAFT_136905-T1.exon3Aspergillus niger ATCC 1015exon
ASPNIDRAFT_136905-T1.exon2ASPNIDRAFT_136905-T1.exon2Aspergillus niger ATCC 1015exon
ASPNIDRAFT_136905-T1.exon1ASPNIDRAFT_136905-T1.exon1Aspergillus niger ATCC 1015exon


Properties
Property NameValue
DBxrefInterPro:IPR005024
DBxrefPFAM:PF03357
ProductESCRT-III subunit protein snf7
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000020.1supercontigACJE01000020.1:1253074..1253924 -
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