You are here

Home

ASPNIDRAFT_137708-T1, ASPNIDRAFT_137708-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_137708-T1
Unique NameASPNIDRAFT_137708-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000016.1:942499..943188-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_137708-T1 ID=ASPNIDRAFT_137708-T1|Name=ASPNIDRAFT_137708-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=690bp|location=Sequence derived from alignment at ACJE01000016.1:942499..943188- (Aspergillus niger ATCC 1015)
ATGTCGAAGCCTTTTGATCCAGAGACGGCGGAGAACTTTGAGGATGTATG
TCGCCTTTGCGCCCGGATCGCCTATTCAGAAACCCAACCAGGAATGCTGA
CTTTTGGTGCAGATGGAGAAGCAGTTTGCCGTTAAGGGTTGGTCCGGACA
TCTCTTTTTCGAACTCGTCTCATGACTCACGATTATGCAGCTGTTGAACA
TCTGATGACATATTGGTCGATTCTGGAGAAGGTCCCCGGCTCGCAACTCC
GCCTGACGAAGATGGACGATGATATCCTCGAGTCTTTCCAGAAGGAATTC
CCCGACTTTGACCCTGCCGAGACGCTTAACGAAGACAAGATGAAGAGCAA
GGAGGGCAAGGAGAAGTGGCGTAACTGGATTAACCAGTATGAGAAGATTA
TCGAGGACTTCAACTTCGGAACCATGCTGCGTGCTAGCCCCAACGTCGAA
TACGACAGAGATACCACGATCTTCGGTAGGTGATACATGGCTGTGTGGCT
TGTCTGGGGGGTGGAACGCCAGCTAACAGAAGGATAGCCATGCGTATGCA
GTTTTACGCCATCGAGATCGCCAGGTGAGTCCTTTCGTTTGGATAAGCAC
CGACAGCAATTGGATACTTATACATGGATTAGAAACCGTGCTGGTCTCAA
CGACTGGATCTACGAGCGCGCGCAGAAGGCTAAGAAATAA
back to top

Coding sequence (CDS) from alignment at ACJE01000016.1:942499..943188-

>ASPNIDRAFT_137708-T1 ID=ASPNIDRAFT_137708-T1|Name=ASPNIDRAFT_137708-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=2325bp|location=Sequence derived from alignment at ACJE01000016.1:942499..943188- (Aspergillus niger ATCC 1015)
AAACCGTGCTGGTCTCAACGACTGGATCTACGAGCGCGCGCAGAAGGCTA
AGAAATAACTAACAGAAGGATAGCCATGCGTATGCAGTTTTACGCCATCG
AGATCGCCAGCTGTTGAACATCTGATGACATATTGGTCGATTCTGGAGAA
GGTCCCCGGCTCGCAACTCCGCCTGACGAAGATGGACGATGATATCCTCG
AGTCTTTCCAGAAGGAATTCCCCGACTTTGACCCTGCCGAGACGCTTAAC
GAAGACAAGATGAAGAGCAAGGAGGGCAAGGAGAAGTGGCGTAACTGGAT
TAACCAGTATGAGAAGATTATCGAGGACTTCAACTTCGGAACCATGCTGC
GTGCTAGCCCCAACGTCGAATACGACAGAGATACCACGATCTTCGATGGA
GAAGCAGTTTGCCGTTAAGGATGTCGAAGCCTTTTGATCCAGAGACGGCG
GAGAACTTTGAGGATAAACCGTGCTGGTCTCAACGACTGGATCTACGAGC
GCGCGCAGAAGGCTAAGAAATAACTAACAGAAGGATAGCCATGCGTATGC
AGTTTTACGCCATCGAGATCGCCAGCTGTTGAACATCTGATGACATATTG
GTCGATTCTGGAGAAGGTCCCCGGCTCGCAACTCCGCCTGACGAAGATGG
ACGATGATATCCTCGAGTCTTTCCAGAAGGAATTCCCCGACTTTGACCCT
GCCGAGACGCTTAACGAAGACAAGATGAAGAGCAAGGAGGGCAAGGAGAA
GTGGCGTAACTGGATTAACCAGTATGAGAAGATTATCGAGGACTTCAACT
TCGGAACCATGCTGCGTGCTAGCCCCAACGTCGAATACGACAGAGATACC
ACGATCTTCGATGGAGAAGCAGTTTGCCGTTAAGGATGTCGAAGCCTTTT
GATCCAGAGACGGCGGAGAACTTTGAGGATAAACCGTGCTGGTCTCAACG
ACTGGATCTACGAGCGCGCGCAGAAGGCTAAGAAATAACTAACAGAAGGA
TAGCCATGCGTATGCAGTTTTACGCCATCGAGATCGCCAGCTGTTGAACA
TCTGATGACATATTGGTCGATTCTGGAGAAGGTCCCCGGCTCGCAACTCC
GCCTGACGAAGATGGACGATGATATCCTCGAGTCTTTCCAGAAGGAATTC
CCCGACTTTGACCCTGCCGAGACGCTTAACGAAGACAAGATGAAGAGCAA
GGAGGGCAAGGAGAAGTGGCGTAACTGGATTAACCAGTATGAGAAGATTA
TCGAGGACTTCAACTTCGGAACCATGCTGCGTGCTAGCCCCAACGTCGAA
TACGACAGAGATACCACGATCTTCGATGGAGAAGCAGTTTGCCGTTAAGG
ATGTCGAAGCCTTTTGATCCAGAGACGGCGGAGAACTTTGAGGATAAACC
GTGCTGGTCTCAACGACTGGATCTACGAGCGCGCGCAGAAGGCTAAGAAA
TAACTAACAGAAGGATAGCCATGCGTATGCAGTTTTACGCCATCGAGATC
GCCAGCTGTTGAACATCTGATGACATATTGGTCGATTCTGGAGAAGGTCC
CCGGCTCGCAACTCCGCCTGACGAAGATGGACGATGATATCCTCGAGTCT
TTCCAGAAGGAATTCCCCGACTTTGACCCTGCCGAGACGCTTAACGAAGA
CAAGATGAAGAGCAAGGAGGGCAAGGAGAAGTGGCGTAACTGGATTAACC
AGTATGAGAAGATTATCGAGGACTTCAACTTCGGAACCATGCTGCGTGCT
AGCCCCAACGTCGAATACGACAGAGATACCACGATCTTCGATGGAGAAGC
AGTTTGCCGTTAAGGATGTCGAAGCCTTTTGATCCAGAGACGGCGGAGAA
CTTTGAGGATAAACCGTGCTGGTCTCAACGACTGGATCTACGAGCGCGCG
CAGAAGGCTAAGAAATAACTAACAGAAGGATAGCCATGCGTATGCAGTTT
TACGCCATCGAGATCGCCAGCTGTTGAACATCTGATGACATATTGGTCGA
TTCTGGAGAAGGTCCCCGGCTCGCAACTCCGCCTGACGAAGATGGACGAT
GATATCCTCGAGTCTTTCCAGAAGGAATTCCCCGACTTTGACCCTGCCGA
GACGCTTAACGAAGACAAGATGAAGAGCAAGGAGGGCAAGGAGAAGTGGC
GTAACTGGATTAACCAGTATGAGAAGATTATCGAGGACTTCAACTTCGGA
ACCATGCTGCGTGCTAGCCCCAACGTCGAATACGACAGAGATACCACGAT
CTTCGATGGAGAAGCAGTTTGCCGTTAAGGATGTCGAAGCCTTTTGATCC
AGAGACGGCGGAGAACTTTGAGGAT
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ASPNIDRAFT_137708ASPNIDRAFT_137708Aspergillus niger ATCC 1015gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_137708-T1ASPNIDRAFT_137708-T1-proteinAspergillus niger ATCC 1015polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_137708-T1.cdsASPNIDRAFT_137708-T1.cdsAspergillus niger ATCC 1015CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_137708-T1.exon5ASPNIDRAFT_137708-T1.exon5Aspergillus niger ATCC 1015exon
ASPNIDRAFT_137708-T1.exon4ASPNIDRAFT_137708-T1.exon4Aspergillus niger ATCC 1015exon
ASPNIDRAFT_137708-T1.exon3ASPNIDRAFT_137708-T1.exon3Aspergillus niger ATCC 1015exon
ASPNIDRAFT_137708-T1.exon2ASPNIDRAFT_137708-T1.exon2Aspergillus niger ATCC 1015exon
ASPNIDRAFT_137708-T1.exon1ASPNIDRAFT_137708-T1.exon1Aspergillus niger ATCC 1015exon


Properties
Property NameValue
NoteEggNog:ENOG41
NoteBUSCO:EOG0926506Z
DBxrefInterPro:IPR021148
DBxrefInterPro:IPR023139
DBxrefPFAM:PF04669
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000016.1supercontigACJE01000016.1:942499..943188 -
Powered by Drupal