You are here

Home

ASPNIDRAFT_139028-T1, ASPNIDRAFT_139028-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_139028-T1
Unique NameASPNIDRAFT_139028-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000004.1:1901404..1903358+

Legend: exonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_139028-T1 ID=ASPNIDRAFT_139028-T1|Name=ASPNIDRAFT_139028-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=1955bp|location=Sequence derived from alignment at ACJE01000004.1:1901404..1903358+ (Aspergillus niger ATCC 1015)
ATTCCCCGCCCCAAGCGTATCGCATGCGTACTTTGCCGAAGGAGGAAGTT
AAGATGCGATGGAAACAAACCCAGTTGCGGGAGATGCTCTCGGTTGGGTC
ATGAATGCATATTCGATGAAGTGCGCAAGAAAAGCGGTCCCAAGCGGGGT
TACGTGAAGCAGCTAGAAGCACGTCTGGGTATGTCCATTGTCTGTCAATA
CCTGACACTCGATTTCTGATCGGAGGCATGTGGGCGCCGATCTCACCGTC
TGCTTCTCTGACATTACACTTATTATGCAGCCCAGGTCGAAACACTACTC
AAAAGTCAGGGAGCACAAGTACAGCAAAGTCAGGGCAATAGTCCTATTGC
CTTACCCTCAAACAATTCGACTGGCGTGCCCGACACCTCTCCCCAGGATG
ATGTCCATATGTCATCTCCGGAAGGAGAGACTGATCCTACTTATTCGACT
CCCGCATCAAATCATGCAGGAACAGCAAGCGCCAATGAACCAGAAGGTAG
ATTGATAGGCCTGGGGCTGGAAGAACCCCTACCCACGCAGGAGGTTATTG
ATGAGCTGCAAGTTTTCCTCCCCACAACTGAGATCTTTATCCACCTTCTA
ATCATGTACAGGACCACGATATACTTCGAGAAGATACATCTGCGGCTTCC
CATGATACATCGCCCAAGGTATCTGGCAGCTTCGAGCCTTGCTCCTGCCT
CACGACCCCCTATATGCTTACAGTACATAATGTGGTGTCATGCGGCGTCT
GTCACCAACAAGTACTCCAGTCTTCACAGTATTTTTTACCAGCGGGCTCG
TAAGTACGCTGAACTAGACGAGTTGGAAGGTCTTGGCGAGCGTGCGTTGT
CTACCGCACATTGTCAAACCTGGGTGCTCATCGGCACATACGAATTCAAA
ATGATGTTTCTTCCTCGAGCGTGGCTAAGTGTCGGGAAGGCTGTCAGACT
GGCGACTATGCTAGGTTTAAATGGTATAGACGAAGAGGGTATCAACGTCA
AACAGACATTGCCGCCTCCCAAAGACTGGTCTGAGAGAGAAGAGCGAAGG
AGGGTATTTTGGATGGCGTTTTGTCTTGATAGATACGCAAGCGTCGGTAC
TGGATGGCCTGTCTCGTTTGATGAGAGAGATGTCAGTTGCTTCAGCGTCT
GCTCTATTTGAAGGGAACAAGCTTGTCTGACTGAGCTCGACAGATTTTCA
CGAACCTTCCTGCATCAGAGGAATCATTTATCGGCAACGAACCGCAACAA
ACCGGTCGACTCGCAGACGTACTGGTAACCGGGAATATTGCTACGATGTC
AACATTTGCAGGAATCGTGATATTAGCTTGCATGTTCGGAAAGAATGTAG
CACATCTGCATCGACCTGATCCCCAAGACAATGATCATGATCTCAATGGC
AGGTACTGGCAGCGGCACCGTGCCTTTGATAATCTTCTACTTCATTTTGC
CCTCTCCATGCCAAGTCATCTGCGACTGACAGTCTTAACGACCGATCCAA
ACATCATATTCTGCAACATGGCTGTCCACACAGCAACGATTTGTCTACAT
CAAGGGGCGATATTCAAAGCTGAAAAGAATAGAATGCCGGAACAGATTGC
CACTGAGAGCAAGCGACGATGTATATTAGCTGCCGATCAAATCTCCAACA
TAATGAAGATGATCAGTCATCTGGATCTAAGTGTTGTCAGTTATAGCATA
ACTTCTATTCGACTTCATTGTGCTAACACAAAGCAGATGGATCCATTTAT
GGCTTTTTGTATATACGTGGCTGCGCGCGTTTTCATCCAATACCTGAAGT
TTCGCCCCAATGACTCCGCTGCACGTTCATCTCTCCAATTTGCCTTTTCT
GCACTCGATGTCTTGAAACAAAAGAATCCACTGGCTGAATCATTTGTGAT
CCAACTTGAACTTGATATCGGTGGGACTGCCTTTGGAGATGTTCGGACTC
CGAAA
back to top

Coding sequence (CDS) from alignment at ACJE01000004.1:1901404..1903358+

>ASPNIDRAFT_139028-T1 ID=ASPNIDRAFT_139028-T1|Name=ASPNIDRAFT_139028-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=5364bp|location=Sequence derived from alignment at ACJE01000004.1:1901404..1903358+ (Aspergillus niger ATCC 1015)
ATTCCCCGCCCCAAGCGTATCGCATGCGTACTTTGCCGAAGGAGGAAGTT
AAGATGCGATGGAAACAAACCCAGTTGCGGGAGATGCTCTCGGTTGGGTC
ATGAATGCATATTCGATGAAGTGCGCAAGAAAAGCGGTCCCAAGCGGGGT
TACGTGAAGCAGCTAGAAGCACGTCTGGCCCAGGTCGAAACACTACTCAA
AAGTCAGGGAGCACAAGTACAGCAAAGTCAGGGCAATAGTCCTATTGCCT
TACCCTCAAACAATTCGACTGGCGTGCCCGACACCTCTCCCCAGGATGAT
GTCCATATGTCATCTCCGGAAGGAGAGACTGATCCTACTTATTCGACTCC
CGCATCAAATCATGCAGGAACAGCAAGCGCCAATGAACCAGAAGGTAGAT
TGATAGGCCTGGGGCTGGAAGAACCCCTACCCACGCAGGAGGTTATTGAT
GAGCTGCAAGTTTTCCTCCCCACAACTGAGATCTTTATCCACCTTCTAAT
CATGTACAGGACCACGATATACTTCGAGAAGATACATCTGCGGCTTCCCA
TGATACATCGCCCAAGGTATCTGGCAGCTTCGAGCCTTGCTCCTGCCTCA
CGACCCCCTATATGCTTACAGTACATAATGTGGTGTCATGCGGCGTCTGT
CACCAACAAGTACTCCAGTCTTCACAGTATTTTTTACCAGCGGGCTCGTA
AGTACGCTGAACTAGACGAGTTGGAAGGTCTTGGCGAGCGTGCGTTGTCT
ACCGCACATTGTCAAACCTGGGTGCTCATCGGCACATACGAATTCAAAAT
GATGTTTCTTCCTCGAGCGTGGCTAAGTGTCGGGAAGGCTGTCAGACTGG
CGACTATGCTAGGTTTAAATGGTATAGACGAAGAGGGTATCAACGTCAAA
CAGACATTGCCGCCTCCCAAAGACTGGTCTGAGAGAGAAGAGCGAAGGAG
GGTATTTTGGATGGCGTTTTGTCTTGATAGATACGCAAGCGTCGGTACTG
GATGGCCTGTCTCGTTTGATGAGAGAGATATTTTCACGAACCTTCCTGCA
TCAGAGGAATCATTTATCGGCAACGAACCGCAACAAACCGGTCGACTCGC
AGACGTACTGGTAACCGGGAATATTGCTACGATGTCAACATTTGCAGGAA
TCGTGATATTAGCTTGCATGTTCGGAAAGAATGTAGCACATCTGCATCGA
CCTGATCCCCAAGACAATGATCATGATCTCAATGGCAGGTACTGGCAGCG
GCACCGTGCCTTTGATAATCTTCTACTTCATTTTGCCCTCTCCATGCCAA
GTCATCTGCGACTGACAGTCTTAACGACCGATCCAAACATCATATTCTGC
AACATGGCTGTCCACACAGCAACGATTTGTCTACATCAAGGGGCGATATT
CAAAGCTGAAAAGAATAGAATGCCGGAACAGATTGCCACTGAGAGCAAGC
GACGATGTATATTAGCTGCCGATCAAATCTCCAACATAATGAAGATGATC
AGTCATCTGGATCTAAGTGTTGTCAGTTATAGCATAACTTCTATTCGACT
TCATTGTGCTAACACAAAGCAGATGGATCCATTTATGGCTTTTTGTATAT
ACGTGGCTGCGCGCGTTTTCATCCAATACCTGAAGTTTCGCCCCAATGAC
TCCGCTGCACGTTCATCTCTCCAATTTGCCTTTTCTGCACTCGATGTCTT
GAAACAAAAGAATCCACTGGCTGAATCATTTGTGATCCAACTTGAACTTG
ATATCGGTGGGACTGCCTTTGGAGATGTTCGGACTCCGATTCCCCGCCCC
AAGCGTATCGCATGCGTACTTTGCCGAAGGAGGAAGTTAAGATGCGATGG
AAACAAACCCAGTTGCGGGAGATGCTCTCGGTTGGGTCATGAATGCATAT
TCGATGAAGTGCGCAAGAAAAGCGGTCCCAAGCGGGGTTACGTGAAGCAG
CTAGAAGCACGTCTGGCCCAGGTCGAAACACTACTCAAAAGTCAGGGAGC
ACAAGTACAGCAAAGTCAGGGCAATAGTCCTATTGCCTTACCCTCAAACA
ATTCGACTGGCGTGCCCGACACCTCTCCCCAGGATGATGTCCATATGTCA
TCTCCGGAAGGAGAGACTGATCCTACTTATTCGACTCCCGCATCAAATCA
TGCAGGAACAGCAAGCGCCAATGAACCAGAAGGTAGATTGATAGGCCTGG
GGCTGGAAGAACCCCTACCCACGCAGGAGGTTATTGATGAGCTGCAAGTT
TTCCTCCCCACAACTGAGATCTTTATCCACCTTCTAATCATGTACAGGAC
CACGATATACTTCGAGAAGATACATCTGCGGCTTCCCATGATACATCGCC
CAAGGTATCTGGCAGCTTCGAGCCTTGCTCCTGCCTCACGACCCCCTATA
TGCTTACAGTACATAATGTGGTGTCATGCGGCGTCTGTCACCAACAAGTA
CTCCAGTCTTCACAGTATTTTTTACCAGCGGGCTCGTAAGTACGCTGAAC
TAGACGAGTTGGAAGGTCTTGGCGAGCGTGCGTTGTCTACCGCACATTGT
CAAACCTGGGTGCTCATCGGCACATACGAATTCAAAATGATGTTTCTTCC
TCGAGCGTGGCTAAGTGTCGGGAAGGCTGTCAGACTGGCGACTATGCTAG
GTTTAAATGGTATAGACGAAGAGGGTATCAACGTCAAACAGACATTGCCG
CCTCCCAAAGACTGGTCTGAGAGAGAAGAGCGAAGGAGGGTATTTTGGAT
GGCGTTTTGTCTTGATAGATACGCAAGCGTCGGTACTGGATGGCCTGTCT
CGTTTGATGAGAGAGATATTTTCACGAACCTTCCTGCATCAGAGGAATCA
TTTATCGGCAACGAACCGCAACAAACCGGTCGACTCGCAGACGTACTGGT
AACCGGGAATATTGCTACGATGTCAACATTTGCAGGAATCGTGATATTAG
CTTGCATGTTCGGAAAGAATGTAGCACATCTGCATCGACCTGATCCCCAA
GACAATGATCATGATCTCAATGGCAGGTACTGGCAGCGGCACCGTGCCTT
TGATAATCTTCTACTTCATTTTGCCCTCTCCATGCCAAGTCATCTGCGAC
TGACAGTCTTAACGACCGATCCAAACATCATATTCTGCAACATGGCTGTC
CACACAGCAACGATTTGTCTACATCAAGGGGCGATATTCAAAGCTGAAAA
GAATAGAATGCCGGAACAGATTGCCACTGAGAGCAAGCGACGATGTATAT
TAGCTGCCGATCAAATCTCCAACATAATGAAGATGATCAGTCATCTGGAT
CTAAGTGTTGTCAGTTATAGCATAACTTCTATTCGACTTCATTGTGCTAA
CACAAAGCAGATGGATCCATTTATGGCTTTTTGTATATACGTGGCTGCGC
GCGTTTTCATCCAATACCTGAAGTTTCGCCCCAATGACTCCGCTGCACGT
TCATCTCTCCAATTTGCCTTTTCTGCACTCGATGTCTTGAAACAAAAGAA
TCCACTGGCTGAATCATTTGTGATCCAACTTGAACTTGATATCGGTGGGA
CTGCCTTTGGAGATGTTCGGACTCCGATTCCCCGCCCCAAGCGTATCGCA
TGCGTACTTTGCCGAAGGAGGAAGTTAAGATGCGATGGAAACAAACCCAG
TTGCGGGAGATGCTCTCGGTTGGGTCATGAATGCATATTCGATGAAGTGC
GCAAGAAAAGCGGTCCCAAGCGGGGTTACGTGAAGCAGCTAGAAGCACGT
CTGGCCCAGGTCGAAACACTACTCAAAAGTCAGGGAGCACAAGTACAGCA
AAGTCAGGGCAATAGTCCTATTGCCTTACCCTCAAACAATTCGACTGGCG
TGCCCGACACCTCTCCCCAGGATGATGTCCATATGTCATCTCCGGAAGGA
GAGACTGATCCTACTTATTCGACTCCCGCATCAAATCATGCAGGAACAGC
AAGCGCCAATGAACCAGAAGGTAGATTGATAGGCCTGGGGCTGGAAGAAC
CCCTACCCACGCAGGAGGTTATTGATGAGCTGCAAGTTTTCCTCCCCACA
ACTGAGATCTTTATCCACCTTCTAATCATGTACAGGACCACGATATACTT
CGAGAAGATACATCTGCGGCTTCCCATGATACATCGCCCAAGGTATCTGG
CAGCTTCGAGCCTTGCTCCTGCCTCACGACCCCCTATATGCTTACAGTAC
ATAATGTGGTGTCATGCGGCGTCTGTCACCAACAAGTACTCCAGTCTTCA
CAGTATTTTTTACCAGCGGGCTCGTAAGTACGCTGAACTAGACGAGTTGG
AAGGTCTTGGCGAGCGTGCGTTGTCTACCGCACATTGTCAAACCTGGGTG
CTCATCGGCACATACGAATTCAAAATGATGTTTCTTCCTCGAGCGTGGCT
AAGTGTCGGGAAGGCTGTCAGACTGGCGACTATGCTAGGTTTAAATGGTA
TAGACGAAGAGGGTATCAACGTCAAACAGACATTGCCGCCTCCCAAAGAC
TGGTCTGAGAGAGAAGAGCGAAGGAGGGTATTTTGGATGGCGTTTTGTCT
TGATAGATACGCAAGCGTCGGTACTGGATGGCCTGTCTCGTTTGATGAGA
GAGATATTTTCACGAACCTTCCTGCATCAGAGGAATCATTTATCGGCAAC
GAACCGCAACAAACCGGTCGACTCGCAGACGTACTGGTAACCGGGAATAT
TGCTACGATGTCAACATTTGCAGGAATCGTGATATTAGCTTGCATGTTCG
GAAAGAATGTAGCACATCTGCATCGACCTGATCCCCAAGACAATGATCAT
GATCTCAATGGCAGGTACTGGCAGCGGCACCGTGCCTTTGATAATCTTCT
ACTTCATTTTGCCCTCTCCATGCCAAGTCATCTGCGACTGACAGTCTTAA
CGACCGATCCAAACATCATATTCTGCAACATGGCTGTCCACACAGCAACG
ATTTGTCTACATCAAGGGGCGATATTCAAAGCTGAAAAGAATAGAATGCC
GGAACAGATTGCCACTGAGAGCAAGCGACGATGTATATTAGCTGCCGATC
AAATCTCCAACATAATGAAGATGATCAGTCATCTGGATCTAAGTGTTGTC
AGTTATAGCATAACTTCTATTCGACTTCATTGTGCTAACACAAAGCAGAT
GGATCCATTTATGGCTTTTTGTATATACGTGGCTGCGCGCGTTTTCATCC
AATACCTGAAGTTTCGCCCCAATGACTCCGCTGCACGTTCATCTCTCCAA
TTTGCCTTTTCTGCACTCGATGTCTTGAAACAAAAGAATCCACTGGCTGA
ATCATTTGTGATCCAACTTGAACTTGATATCGGTGGGACTGCCTTTGGAG
ATGTTCGGACTCCG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
Vocabulary: Biological Process
TermDefinition
GO:0006351transcription, DNA-templated
GO:0006355regulation of transcription, DNA-templated
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
GO:0008270zinc ion binding
GO:0000981DNA-binding transcription factor activity, RNA polymerase II-specific
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ASPNIDRAFT_139028ASPNIDRAFT_139028Aspergillus niger ATCC 1015gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_139028-T1.exon1ASPNIDRAFT_139028-T1.exon1Aspergillus niger ATCC 1015exon
ASPNIDRAFT_139028-T1.exon2ASPNIDRAFT_139028-T1.exon2Aspergillus niger ATCC 1015exon
ASPNIDRAFT_139028-T1.exon3ASPNIDRAFT_139028-T1.exon3Aspergillus niger ATCC 1015exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_139028-T1.cdsASPNIDRAFT_139028-T1.cdsAspergillus niger ATCC 1015CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_139028-T1.utr3p1ASPNIDRAFT_139028-T1.utr3p1Aspergillus niger ATCC 1015three_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_139028-T1ASPNIDRAFT_139028-T1-proteinAspergillus niger ATCC 1015polypeptide


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR036864
DBxrefInterPro:IPR007219
DBxrefInterPro:IPR001138
DBxrefPFAM:PF00172
DBxrefPFAM:PF04082
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000004.1supercontigACJE01000004.1:1901404..1903358 +
Powered by Drupal