You are here

Home

ASPNIDRAFT_139819-T1, ASPNIDRAFT_139819-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_139819-T1
Unique NameASPNIDRAFT_139819-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000006.1:133171..134920+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_139819-T1 ID=ASPNIDRAFT_139819-T1|Name=ASPNIDRAFT_139819-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=1750bp|location=Sequence derived from alignment at ACJE01000006.1:133171..134920+ (Aspergillus niger ATCC 1015)
GACAGTTCCTCCCGTCCAGCCTCCTACAAAGCCATTGGTATCTCTCTCGC
CATCGCCTCGGGTTTCTTTATCGGCGTCTCCTTCGTACTCAAGAAAAAAG
GCCTCCTCCGCGCCAATGTCAAGTACAATGAAGAAGCCGGCGAAGGGTAT
GGATACCTGAAGAACCTCTTCTGGTGGGGCGGGATGACCCTGATGATCAT
CGGGGAGCTGTGCAACTTTGTTGCCTATGCTTTCGTCGACGCTATCCTCG
TGACGCCGATGGGCGCACTGACGGTCGTGGTGACCACCATCTTGTCGGCA
ATCTTTCTGAAGGAGCGGCTCAGTTTCGTTGGAAAAGTGGGCTGTTTTTG
CTGCATCTTAGGCAGTGTGGTTATTGCGTTGAATGCGCCAGAACAGTCGT
CTGTGAGTGATATTCAGGAGATGAAGAGCTATGTCATTTCTCCGGGGTTT
TTGTCTTATGCTGGGGTAATTATCGTGGGGTGTGTCGTCACGGCGGTTTG
GTTGGGGCCTAAATATGGCAAGAAGAGCATGTTCGTGTATATCAGCATTT
GCTCGTTGATTGGAGGGTTGAGTGTCGTGGCAACGCAGGGTCTGGGATCT
GCTATCCTGGCTCAGATTAATGGTGAGGCGCAGTTCAACCAGTGGTTTAT
GTACGTCTTGCTGGTGTTTGTTATCACGACGCTGGTGACTGAGATTGTCT
ATCTCAATGTGCGTATCCCTTATGTTCTTCATGATTTCGTTTGGTGTACT
AATGCTCAGCCAGAAAGCCCTCAACATCTTCAACGCTGCGCTGGTCACTC
CTACCTACTACGTCTTCTTCACCAGTTCCACCATTGTCACCTCCGCCGTG
CTGTTCCGCGGCTTCAAGGGGTCCGTCTCCTCCATCGTCACGGTCATCCT
AGGCTTTCTGCAGATCTGCGCTGGTGTCGTCCTGCTGCAGCTGTCCAAAT
CCGCCAAGGACGTCCCCGATGCCGCTGTCTTCAAGGGAGATCTCGACCAG
GTGCGCGAGGTCGCCACGCAAGAAGAGCCTGAATTTGAGCCCAAGGCCGA
CTCCATTCGCGCCACTGCTGCTATCATTCGTCGTATCTCCACCCCACGCC
GCCAGATGGAAGCTGACGAAGCCCGGCGCTACTTCCACGACCGCGCTGAA
GACCTTAAGCCGCCGGCGGAGAATGAGGTTATCGAGTGGGACGGGTTGCG
CCGGCGCAAGACCGTCCTCGGCGAAGGTCCAACCACCCTGGGACGCACGC
GAACCCTGCGCGACCCCTCGGTCAAGTATCCCGTCCCGCCACTGGGCATG
TCGCACGTACCGGAGGAGCGACCAGACGAGCCGGAGCGACCCGACACGAA
GCAGAGCAGCCATTCCTTCCTCGACGACCTGCGATCTCGCGCCTCGAGCC
TCTTCCATCCTGCCTGGCAGCCCATCCAGGATGAACATACCACGCCGGAC
CCGGTCTCCCTGACAGCCCTATCCGCCCACAGGCCGCATCCCGACACCCG
CTACCCACAGTCAGTCATCCCAGACGAGTCACGCAGCCACACGCCATGGG
GAGACGAACACGCGGCCCCTTCCCCGCCACCCCACGGCGGCACACGACGC
CAATTCTCATTCAACTCGATGCTCCACCGCATGAAATCAGGCCACGAAGC
AACTGCATCGCGAAGCAGCGTTGCCCCCCGACCGCCCCGCCACCGGGCAC
AGTCCGTCACCGAGGAAGAACGCCTTGGTCTCGTGCGCGGTGACTCCCGG
back to top

Coding sequence (CDS) from alignment at ACJE01000006.1:133171..134920+

>ASPNIDRAFT_139819-T1 ID=ASPNIDRAFT_139819-T1|Name=ASPNIDRAFT_139819-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=3390bp|location=Sequence derived from alignment at ACJE01000006.1:133171..134920+ (Aspergillus niger ATCC 1015)
GACAGTTCCTCCCGTCCAGCCTCCTACAAAGCCATTGGTATCTCTCTCGC
CATCGCCTCGGGTTTCTTTATCGGCGTCTCCTTCGTACTCAAGAAAAAAG
GCCTCCTCCGCGCCAATGTCAAGTACAATGAAGAAGCCGGCGAAGGGTAT
GGATACCTGAAGAACCTCTTCTGGTGGGGCGGGATGACCCTGATGATCAT
CGGGGAGCTGTGCAACTTTGTTGCCTATGCTTTCGTCGACGCTATCCTCG
TGACGCCGATGGGCGCACTGACGGTCGTGGTGACCACCATCTTGTCGGCA
ATCTTTCTGAAGGAGCGGCTCAGTTTCGTTGGAAAAGTGGGCTGTTTTTG
CTGCATCTTAGGCAGTGTGGTTATTGCGTTGAATGCGCCAGAACAGTCGT
CTGTGAGTGATATTCAGGAGATGAAGAGCTATGTCATTTCTCCGGGGTTT
TTGTCTTATGCTGGGGTAATTATCGTGGGGTGTGTCGTCACGGCGGTTTG
GTTGGGGCCTAAATATGGCAAGAAGAGCATGTTCGTGTATATCAGCATTT
GCTCGTTGATTGGAGGGTTGAGTGTCGTGGCAACGCAGGGTCTGGGATCT
GCTATCCTGGCTCAGATTAATGGTGAGGCGCAGTTCAACCAGTGGTTTAT
GTACGTCTTGCTGGTGTTTGTTATCACGACGCTGGTGACTGAGATTGTCT
ATCTCAATAAAGCCCTCAACATCTTCAACGCTGCGCTGGTCACTCCTACC
TACTACGTCTTCTTCACCAGTTCCACCATTGTCACCTCCGCCGTGCTGTT
CCGCGGCTTCAAGGGGTCCGTCTCCTCCATCGTCACGGTCATCCTAGGCT
TTCTGCAGATCTGCGCTGGTGTCGTCCTGCTGCAGCTGTCCAAATCCGCC
AAGGACGTCCCCGATGCCGCTGTCTTCAAGGGAGATCTCGACCAGGTGCG
CGAGGTCGCCACGCAAGAAGAGCCTGAATTTGAGCCCAAGGCCGACTCCA
TTCGCGCCACTGCTGCTATCATTCGTCGTATCTCCACCCCACGCCGCCAG
ATGGAAGCTGACGAAGCCCGGCGCTACTTCCACGACCGCGCTGAAGACCT
TAAGCCGCCGGCGGAGAATGAGGTTATCGAGTGGGACGGGTTGCGCCGGC
GCAAGACCGTCCTCGGCGAAGGTCCAACCACCCTGGGACGCACGCGAACC
CTGCGCGACCCCTCGGTCAAGTATCCCGTCCCGCCACTGGGCATGTCGCA
CGTACCGGAGGAGCGACCAGACGAGCCGGAGCGACCCGACACGAAGCAGA
GCAGCCATTCCTTCCTCGACGACCTGCGATCTCGCGCCTCGAGCCTCTTC
CATCCTGCCTGGCAGCCCATCCAGGATGAACATACCACGCCGGACCCGGT
CTCCCTGACAGCCCTATCCGCCCACAGGCCGCATCCCGACACCCGCTACC
CACAGTCAGTCATCCCAGACGAGTCACGCAGCCACACGCCATGGGGAGAC
GAACACGCGGCCCCTTCCCCGCCACCCCACGGCGGCACACGACGCCAATT
CTCATTCAACTCGATGCTCCACCGCATGAAATCAGGCCACGAAGCAACTG
CATCGCGAAGCAGCGTTGCCCCCCGACCGCCCCGCCACCGGGCACAGTCC
GTCACCGAGGAAGAACGCCTTGGTCTCGTGCGCGGTGACTCCCGGGACAG
TTCCTCCCGTCCAGCCTCCTACAAAGCCATTGGTATCTCTCTCGCCATCG
CCTCGGGTTTCTTTATCGGCGTCTCCTTCGTACTCAAGAAAAAAGGCCTC
CTCCGCGCCAATGTCAAGTACAATGAAGAAGCCGGCGAAGGGTATGGATA
CCTGAAGAACCTCTTCTGGTGGGGCGGGATGACCCTGATGATCATCGGGG
AGCTGTGCAACTTTGTTGCCTATGCTTTCGTCGACGCTATCCTCGTGACG
CCGATGGGCGCACTGACGGTCGTGGTGACCACCATCTTGTCGGCAATCTT
TCTGAAGGAGCGGCTCAGTTTCGTTGGAAAAGTGGGCTGTTTTTGCTGCA
TCTTAGGCAGTGTGGTTATTGCGTTGAATGCGCCAGAACAGTCGTCTGTG
AGTGATATTCAGGAGATGAAGAGCTATGTCATTTCTCCGGGGTTTTTGTC
TTATGCTGGGGTAATTATCGTGGGGTGTGTCGTCACGGCGGTTTGGTTGG
GGCCTAAATATGGCAAGAAGAGCATGTTCGTGTATATCAGCATTTGCTCG
TTGATTGGAGGGTTGAGTGTCGTGGCAACGCAGGGTCTGGGATCTGCTAT
CCTGGCTCAGATTAATGGTGAGGCGCAGTTCAACCAGTGGTTTATGTACG
TCTTGCTGGTGTTTGTTATCACGACGCTGGTGACTGAGATTGTCTATCTC
AATAAAGCCCTCAACATCTTCAACGCTGCGCTGGTCACTCCTACCTACTA
CGTCTTCTTCACCAGTTCCACCATTGTCACCTCCGCCGTGCTGTTCCGCG
GCTTCAAGGGGTCCGTCTCCTCCATCGTCACGGTCATCCTAGGCTTTCTG
CAGATCTGCGCTGGTGTCGTCCTGCTGCAGCTGTCCAAATCCGCCAAGGA
CGTCCCCGATGCCGCTGTCTTCAAGGGAGATCTCGACCAGGTGCGCGAGG
TCGCCACGCAAGAAGAGCCTGAATTTGAGCCCAAGGCCGACTCCATTCGC
GCCACTGCTGCTATCATTCGTCGTATCTCCACCCCACGCCGCCAGATGGA
AGCTGACGAAGCCCGGCGCTACTTCCACGACCGCGCTGAAGACCTTAAGC
CGCCGGCGGAGAATGAGGTTATCGAGTGGGACGGGTTGCGCCGGCGCAAG
ACCGTCCTCGGCGAAGGTCCAACCACCCTGGGACGCACGCGAACCCTGCG
CGACCCCTCGGTCAAGTATCCCGTCCCGCCACTGGGCATGTCGCACGTAC
CGGAGGAGCGACCAGACGAGCCGGAGCGACCCGACACGAAGCAGAGCAGC
CATTCCTTCCTCGACGACCTGCGATCTCGCGCCTCGAGCCTCTTCCATCC
TGCCTGGCAGCCCATCCAGGATGAACATACCACGCCGGACCCGGTCTCCC
TGACAGCCCTATCCGCCCACAGGCCGCATCCCGACACCCGCTACCCACAG
TCAGTCATCCCAGACGAGTCACGCAGCCACACGCCATGGGGAGACGAACA
CGCGGCCCCTTCCCCGCCACCCCACGGCGGCACACGACGCCAATTCTCAT
TCAACTCGATGCTCCACCGCATGAAATCAGGCCACGAAGCAACTGCATCG
CGAAGCAGCGTTGCCCCCCGACCGCCCCGCCACCGGGCACAGTCCGTCAC
CGAGGAAGAACGCCTTGGTCTCGTGCGCGGTGACTCCCGG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
Vocabulary: Biological Process
TermDefinition
GO:0015693magnesium ion transport
Vocabulary: Molecular Function
TermDefinition
GO:0015095magnesium ion transmembrane transporter activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ASPNIDRAFT_139819ASPNIDRAFT_139819Aspergillus niger ATCC 1015gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_139819-T1.exon1ASPNIDRAFT_139819-T1.exon1Aspergillus niger ATCC 1015exon
ASPNIDRAFT_139819-T1.exon2ASPNIDRAFT_139819-T1.exon2Aspergillus niger ATCC 1015exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_139819-T1.cdsASPNIDRAFT_139819-T1.cdsAspergillus niger ATCC 1015CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_139819-T1ASPNIDRAFT_139819-T1-proteinAspergillus niger ATCC 1015polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR008521
DBxrefPFAM:PF05653
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000006.1supercontigACJE01000006.1:133171..134920 +
Powered by Drupal