You are here

Home

ASPNIDRAFT_140013-T1, ASPNIDRAFT_140013-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_140013-T1
Unique NameASPNIDRAFT_140013-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000020.1:195695..196935+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_140013-T1 ID=ASPNIDRAFT_140013-T1|Name=ASPNIDRAFT_140013-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=1241bp|location=Sequence derived from alignment at ACJE01000020.1:195695..196935+ (Aspergillus niger ATCC 1015)
CTGTCCACCATCATAGCTGCCCCTGTCTCCCCGTCCATCTTGGCTCATTT
TCATTCCGACAATGCCCTCTACCGCACCCTCATTGTTTCCATCTGGGAAC
TCGGTGAAATCGTAGCACCGTTACTATGGGGCCCGCTTTCTGAGTTGTAT
GGCCGACAATGGCCTCTGAATATTGCCAACCTCTTCTTCGTGGCCTTCTT
GGCTGGCACTGCCGCCAGCACCAGTATCCAGATGCTGATTGCATTCCGGT
TCCTGAGTGGTGCGGCGACTGCAGCATCAGCCATCGGTCCTGGCATTGTC
AGCGATCTCTTTCCAGAGGAAAGTCGCGGACGTGCCATGTCTATTATGTC
CTTGACCGGTGCATTGGGACCAGTAGTAGGCCCCATCATCGGCTCCTATC
TGGGTGAAAAGGCCGGATGGCGATGGGCATTCTGGTTACCGACCATTGCT
ACGGGTACTCTGTCCCTGCTCATTCTTGTTGTGTACCGTGAAACGTACAG
CGTCACTCTACAGAAACGCAAAGCTAGACAGCAGAACCCCGAGAGTGGTT
CCAAGAGTCCCGAGGATACAGACAAGACGGCCAGTCAAGTATTTTTCAAA
GCTATCCTCCGGCCACTTCGTCTGCTCATCCGGTCCCCCATGCTTATACT
AGTTACCTTCTACCTCAGCGTGGTCTACGGGTACACCTACCTGGTGATGA
CAACCATCGCACCACTGTTCCAGGATGTCTACGGCTTCTCCGAAGGAGCT
TCCGGCCTAGCCTTCCTAGGACTGTGCCTTGGGCTTATTCTGGGGGCTTT
CCTTTGCAGCTTTCTGCTAGATCGCTATGTACGCACAGCCAGGGCACGGT
CCGGCACCTCTAAACCAGAGCAGCGCCTTCCTCCCGTACTGATTGCATGC
TTCGTTATGTCAGGCGGCCTTTTTCTCTTTGGTTGGACCGCACAGTATCA
TGTCCAATGGATTGCACCAATTATTGGTACGGGCATTATTGGGTTTGGAC
TAGTGTCTACCACCATCACCTTGCAGACTTACGTCGTGGACCTCTTTGGC
ATCTACGCCGCGAGTGCTACCAGCGCAATGCTGGTGCCCAGAAATGCCTG
CGCCGCATTCTTGCCCCTTGCAGGGCCACCATTGTTTGACCGCCTTGGAT
ACAACTGGGGCGGGACTCTACTGGCGCTGATTGTATTGGTGTTCTCGCTC
ATGCCCCTAATCTTTATCAAGTATGGCGAGAGATTGCGGGG
back to top

Coding sequence (CDS) from alignment at ACJE01000020.1:195695..196935+

>ASPNIDRAFT_140013-T1 ID=ASPNIDRAFT_140013-T1|Name=ASPNIDRAFT_140013-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=1241bp|location=Sequence derived from alignment at ACJE01000020.1:195695..196935+ (Aspergillus niger ATCC 1015)
CTGTCCACCATCATAGCTGCCCCTGTCTCCCCGTCCATCTTGGCTCATTT
TCATTCCGACAATGCCCTCTACCGCACCCTCATTGTTTCCATCTGGGAAC
TCGGTGAAATCGTAGCACCGTTACTATGGGGCCCGCTTTCTGAGTTGTAT
GGCCGACAATGGCCTCTGAATATTGCCAACCTCTTCTTCGTGGCCTTCTT
GGCTGGCACTGCCGCCAGCACCAGTATCCAGATGCTGATTGCATTCCGGT
TCCTGAGTGGTGCGGCGACTGCAGCATCAGCCATCGGTCCTGGCATTGTC
AGCGATCTCTTTCCAGAGGAAAGTCGCGGACGTGCCATGTCTATTATGTC
CTTGACCGGTGCATTGGGACCAGTAGTAGGCCCCATCATCGGCTCCTATC
TGGGTGAAAAGGCCGGATGGCGATGGGCATTCTGGTTACCGACCATTGCT
ACGGGTACTCTGTCCCTGCTCATTCTTGTTGTGTACCGTGAAACGTACAG
CGTCACTCTACAGAAACGCAAAGCTAGACAGCAGAACCCCGAGAGTGGTT
CCAAGAGTCCCGAGGATACAGACAAGACGGCCAGTCAAGTATTTTTCAAA
GCTATCCTCCGGCCACTTCGTCTGCTCATCCGGTCCCCCATGCTTATACT
AGTTACCTTCTACCTCAGCGTGGTCTACGGGTACACCTACCTGGTGATGA
CAACCATCGCACCACTGTTCCAGGATGTCTACGGCTTCTCCGAAGGAGCT
TCCGGCCTAGCCTTCCTAGGACTGTGCCTTGGGCTTATTCTGGGGGCTTT
CCTTTGCAGCTTTCTGCTAGATCGCTATGTACGCACAGCCAGGGCACGGT
CCGGCACCTCTAAACCAGAGCAGCGCCTTCCTCCCGTACTGATTGCATGC
TTCGTTATGTCAGGCGGCCTTTTTCTCTTTGGTTGGACCGCACAGTATCA
TGTCCAATGGATTGCACCAATTATTGGTACGGGCATTATTGGGTTTGGAC
TAGTGTCTACCACCATCACCTTGCAGACTTACGTCGTGGACCTCTTTGGC
ATCTACGCCGCGAGTGCTACCAGCGCAATGCTGGTGCCCAGAAATGCCTG
CGCCGCATTCTTGCCCCTTGCAGGGCCACCATTGTTTGACCGCCTTGGAT
ACAACTGGGGCGGGACTCTACTGGCGCTGATTGTATTGGTGTTCTCGCTC
ATGCCCCTAATCTTTATCAAGTATGGCGAGAGATTGCGGGG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005887integral component of plasma membrane
Vocabulary: Biological Process
TermDefinition
GO:0055085transmembrane transport
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ASPNIDRAFT_140013ASPNIDRAFT_140013Aspergillus niger ATCC 1015gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_140013-T1.exon1ASPNIDRAFT_140013-T1.exon1Aspergillus niger ATCC 1015exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_140013-T1.cdsASPNIDRAFT_140013-T1.cdsAspergillus niger ATCC 1015CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_140013-T1ASPNIDRAFT_140013-T1-proteinAspergillus niger ATCC 1015polypeptide


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR036259
DBxrefInterPro:IPR020846
DBxrefInterPro:IPR011701
DBxrefPFAM:PF00083
DBxrefPFAM:PF07690
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000020.1supercontigACJE01000020.1:195695..196935 +
Powered by Drupal