You are here

Home

ASPNIDRAFT_142190-T1, ASPNIDRAFT_142190-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_142190-T1
Unique NameASPNIDRAFT_142190-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000002.1:1675303..1676373+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_142190-T1 ID=ASPNIDRAFT_142190-T1|Name=ASPNIDRAFT_142190-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=1071bp|location=Sequence derived from alignment at ACJE01000002.1:1675303..1676373+ (Aspergillus niger ATCC 1015)
TCAGTCCTCATTACTGGCGTCACACTCGGCAGTGTTGGCGGCGAGGCGGC
TCTTCAGCTCTCCCGCCACGCGCCGGCTCTCTTGGTCCTGGCTGGTCGCA
ACCTGGAGACTCTCCAGGCCACCGAAAATGCCATCAAAGCCGAGACACCG
GATGCCAACACCCGACTGCTCATTATAGATTTGAGCTCGCAGGAAAGCGT
CCGCAGGGCAGCTGCGGAGGTGAATAACTATCCAGAGCGCCTTGACCATC
TTATCAACAACGCAGGCATCATGGCGGCACCGTACTCGACCACGCCAGAG
GGAGTGGAACTGCAGTTTGGAATAAATCACATTGGCCACTTCCTATTCAC
GAACCTGCTCTTGGAGAAGATCATGAGCGGGGAGTCCAAGGTTCGGGTCG
TGAATGTCAGTAGTGCCGGCCATAAGCGTGGACCTGTGAGGTTTGGGGAT
GTGAATTTCGAGGTTTGTGCAGTCCCGTGGTTTATTCTTTCGTTCGGTTG
CACGCGAGCAAGGGAGATTTAATTGACGCTATGGTAGAATGGGAAATGCT
ATGACAAGTGGCAGGCATACGGCCAGAGTAAGACGGCTAACATGCTCTTC
TCGGTATCACTGGCGGAGAAGGCTGGGAACAAAGGAGTGGAGTCATTCAG
TCTTTATCCTGGCCGACGAGAGACTGGCATCGGAAGACATTTGAAGCCAG
AAGAATGGGTCAAGGCTGGTATGTAGAACTTCTGATGTGACAGCCAATTG
TCCGGTAGTGTGAAGGATGCTAACTCGATGACTCAAGGGTGGAAACATGA
GGATGGAAGTATCAATGATGACCCTAAGCTGAACTGGAGAACTGCCAGCC
AGGGAGCTGCCACCTTGATTGTAGCAGCATATGATCCTAGCAATTCTGGT
AAGCACGCTTCACCAATATGGGCGGGTAGATGGTAACGAATTGCAGACAA
AAACGGCTCGTATATGGTCAATAATCAAGTAAACAATGACGAGGCGGTGG
AATATGCTCTGGATCCGAAAAATGCAGAAAGGCTGTGGAAGCTAAGCGAG
GAGATTGTCGGCCAGAAGTTC
back to top

Coding sequence (CDS) from alignment at ACJE01000002.1:1675303..1676373+

>ASPNIDRAFT_142190-T1 ID=ASPNIDRAFT_142190-T1|Name=ASPNIDRAFT_142190-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=3444bp|location=Sequence derived from alignment at ACJE01000002.1:1675303..1676373+ (Aspergillus niger ATCC 1015)
TCAGTCCTCATTACTGGCGTCACACTCGGCAGTGTTGGCGGCGAGGCGGC
TCTTCAGCTCTCCCGCCACGCGCCGGCTCTCTTGGTCCTGGCTGGTCGCA
ACCTGGAGACTCTCCAGGCCACCGAAAATGCCATCAAAGCCGAGACACCG
GATGCCAACACCCGACTGCTCATTATAGATTTGAGCTCGCAGGAAAGCGT
CCGCAGGGCAGCTGCGGAGGTGAATAACTATCCAGAGCGCCTTGACCATC
TTATCAACAACGCAGGCATCATGGCGGCACCGTACTCGACCACGCCAGAG
GGAGTGGAACTGCAGTTTGGAATAAATCACATTGGCCACTTCCTATTCAC
GAACCTGCTCTTGGAGAAGATCATGAGCGGGGAGTCCAAGGTTCGGGTCG
TGAATGTCAGTAGTGCCGGCCATAAGCGTGGACCTGTGAGGTTTGGGGAT
GTGAATTTCGAGAATGGGAAATGCTATGACAAGTGGCAGGCATACGGCCA
GAGTAAGACGGCTAACATGCTCTTCTCGGTATCACTGGCGGAGAAGGCTG
GGAACAAAGGAGTGGAGTCATTCAGTCTTTATCCTGGCCGACGAGAGACT
GGCATCGGAAGACATTTGAAGCCAGAAGAATGGGTCAAGGCTGGTATTAT
CAATGATGACCCTAAGCTGAACTGGAGAACTGCCAGCCAGGGAGCTGCCA
CCTTGATTGTAGCAGCATATGATCCTAGCAATTCTGACAAAAACGGCTCG
TATATGGTCAATAATCAAGTAAACAATGACGAGGCGGTGGAATATGCTCT
GGATCCGAAAAATGCAGAAAGGCTGTGGAAGCTAAGCGAGGAGATTGTCG
GCCAGAAGTTCTCAGTCCTCATTACTGGCGTCACACTCGGCAGTGTTGGC
GGCGAGGCGGCTCTTCAGCTCTCCCGCCACGCGCCGGCTCTCTTGGTCCT
GGCTGGTCGCAACCTGGAGACTCTCCAGGCCACCGAAAATGCCATCAAAG
CCGAGACACCGGATGCCAACACCCGACTGCTCATTATAGATTTGAGCTCG
CAGGAAAGCGTCCGCAGGGCAGCTGCGGAGGTGAATAACTATCCAGAGCG
CCTTGACCATCTTATCAACAACGCAGGCATCATGGCGGCACCGTACTCGA
CCACGCCAGAGGGAGTGGAACTGCAGTTTGGAATAAATCACATTGGCCAC
TTCCTATTCACGAACCTGCTCTTGGAGAAGATCATGAGCGGGGAGTCCAA
GGTTCGGGTCGTGAATGTCAGTAGTGCCGGCCATAAGCGTGGACCTGTGA
GGTTTGGGGATGTGAATTTCGAGAATGGGAAATGCTATGACAAGTGGCAG
GCATACGGCCAGAGTAAGACGGCTAACATGCTCTTCTCGGTATCACTGGC
GGAGAAGGCTGGGAACAAAGGAGTGGAGTCATTCAGTCTTTATCCTGGCC
GACGAGAGACTGGCATCGGAAGACATTTGAAGCCAGAAGAATGGGTCAAG
GCTGGTATTATCAATGATGACCCTAAGCTGAACTGGAGAACTGCCAGCCA
GGGAGCTGCCACCTTGATTGTAGCAGCATATGATCCTAGCAATTCTGACA
AAAACGGCTCGTATATGGTCAATAATCAAGTAAACAATGACGAGGCGGTG
GAATATGCTCTGGATCCGAAAAATGCAGAAAGGCTGTGGAAGCTAAGCGA
GGAGATTGTCGGCCAGAAGTTCTCAGTCCTCATTACTGGCGTCACACTCG
GCAGTGTTGGCGGCGAGGCGGCTCTTCAGCTCTCCCGCCACGCGCCGGCT
CTCTTGGTCCTGGCTGGTCGCAACCTGGAGACTCTCCAGGCCACCGAAAA
TGCCATCAAAGCCGAGACACCGGATGCCAACACCCGACTGCTCATTATAG
ATTTGAGCTCGCAGGAAAGCGTCCGCAGGGCAGCTGCGGAGGTGAATAAC
TATCCAGAGCGCCTTGACCATCTTATCAACAACGCAGGCATCATGGCGGC
ACCGTACTCGACCACGCCAGAGGGAGTGGAACTGCAGTTTGGAATAAATC
ACATTGGCCACTTCCTATTCACGAACCTGCTCTTGGAGAAGATCATGAGC
GGGGAGTCCAAGGTTCGGGTCGTGAATGTCAGTAGTGCCGGCCATAAGCG
TGGACCTGTGAGGTTTGGGGATGTGAATTTCGAGAATGGGAAATGCTATG
ACAAGTGGCAGGCATACGGCCAGAGTAAGACGGCTAACATGCTCTTCTCG
GTATCACTGGCGGAGAAGGCTGGGAACAAAGGAGTGGAGTCATTCAGTCT
TTATCCTGGCCGACGAGAGACTGGCATCGGAAGACATTTGAAGCCAGAAG
AATGGGTCAAGGCTGGTATTATCAATGATGACCCTAAGCTGAACTGGAGA
ACTGCCAGCCAGGGAGCTGCCACCTTGATTGTAGCAGCATATGATCCTAG
CAATTCTGACAAAAACGGCTCGTATATGGTCAATAATCAAGTAAACAATG
ACGAGGCGGTGGAATATGCTCTGGATCCGAAAAATGCAGAAAGGCTGTGG
AAGCTAAGCGAGGAGATTGTCGGCCAGAAGTTCTCAGTCCTCATTACTGG
CGTCACACTCGGCAGTGTTGGCGGCGAGGCGGCTCTTCAGCTCTCCCGCC
ACGCGCCGGCTCTCTTGGTCCTGGCTGGTCGCAACCTGGAGACTCTCCAG
GCCACCGAAAATGCCATCAAAGCCGAGACACCGGATGCCAACACCCGACT
GCTCATTATAGATTTGAGCTCGCAGGAAAGCGTCCGCAGGGCAGCTGCGG
AGGTGAATAACTATCCAGAGCGCCTTGACCATCTTATCAACAACGCAGGC
ATCATGGCGGCACCGTACTCGACCACGCCAGAGGGAGTGGAACTGCAGTT
TGGAATAAATCACATTGGCCACTTCCTATTCACGAACCTGCTCTTGGAGA
AGATCATGAGCGGGGAGTCCAAGGTTCGGGTCGTGAATGTCAGTAGTGCC
GGCCATAAGCGTGGACCTGTGAGGTTTGGGGATGTGAATTTCGAGAATGG
GAAATGCTATGACAAGTGGCAGGCATACGGCCAGAGTAAGACGGCTAACA
TGCTCTTCTCGGTATCACTGGCGGAGAAGGCTGGGAACAAAGGAGTGGAG
TCATTCAGTCTTTATCCTGGCCGACGAGAGACTGGCATCGGAAGACATTT
GAAGCCAGAAGAATGGGTCAAGGCTGGTATTATCAATGATGACCCTAAGC
TGAACTGGAGAACTGCCAGCCAGGGAGCTGCCACCTTGATTGTAGCAGCA
TATGATCCTAGCAATTCTGACAAAAACGGCTCGTATATGGTCAATAATCA
AGTAAACAATGACGAGGCGGTGGAATATGCTCTGGATCCGAAAAATGCAG
AAAGGCTGTGGAAGCTAAGCGAGGAGATTGTCGGCCAGAAGTTC
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ASPNIDRAFT_142190ASPNIDRAFT_142190Aspergillus niger ATCC 1015gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_142190-T1.exon1ASPNIDRAFT_142190-T1.exon1Aspergillus niger ATCC 1015exon
ASPNIDRAFT_142190-T1.exon2ASPNIDRAFT_142190-T1.exon2Aspergillus niger ATCC 1015exon
ASPNIDRAFT_142190-T1.exon3ASPNIDRAFT_142190-T1.exon3Aspergillus niger ATCC 1015exon
ASPNIDRAFT_142190-T1.exon4ASPNIDRAFT_142190-T1.exon4Aspergillus niger ATCC 1015exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_142190-T1.cdsASPNIDRAFT_142190-T1.cdsAspergillus niger ATCC 1015CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_142190-T1ASPNIDRAFT_142190-T1-proteinAspergillus niger ATCC 1015polypeptide


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR036291
DBxrefInterPro:IPR002347
DBxrefPFAM:PF08659
DBxrefPFAM:PF13561
DBxrefPFAM:PF00106
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000002.1supercontigACJE01000002.1:1675303..1676373 +
Powered by Drupal