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Sequences
The following sequences are available for this feature:
mRNA from alignment at ACJE01000006.1:1616863..1617399+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >ASPNIDRAFT_143614-T1 ID=ASPNIDRAFT_143614-T1|Name=ASPNIDRAFT_143614-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=537bp|location=Sequence derived from alignment at ACJE01000006.1:1616863..1617399+ (Aspergillus niger ATCC 1015)
GAGTGCATCGCTGCTTATAAAGAGCTTCTATACAGAAGGGGGGCAGATAA
ACCTGCATTCGTTATCTACAAGATATCCGACGACGAACGCTCTATCGTCG
TGGAAGAAAGCTCCCCGGAGAAGAACTACGAGGCATTCCTCCAAAAGCTT
ACATCCGCACATGATAGTGACAGGAAACCTGCACCTCGATATGCAATATA
TGACGTGGAGTATGACTTGCTTGAAGACGGTAGGAGGTAATTGAGAGGAT
CTCCGGAAGTAGATAGAGCAATATGGGTATGTCGTGCTAACCTTCGTCAG
AGCGACAATTGTCTTTATCAGCTGGATGCCCGATGTGACGTCTACCCGGG
TAGGTCATCGCGCTTCTAAAGCTTTAACGTTTATCTGAGTCCCCACTGAC
ACGACGGTTAGATCCGTATGCTCTATGCTTCTACCAAGGAGCAGCTCCGA
AAGGCTCTCGATGTCAAAGTATCCATCCATGCTGATAATTTGCATGATAT
TGAATGGAAGACGGTGTTAAAAGAAGCCAGTGGTGGG back to topCoding sequence (CDS) from alignment at ACJE01000006.1:1616863..1617399+ >ASPNIDRAFT_143614-T1 ID=ASPNIDRAFT_143614-T1|Name=ASPNIDRAFT_143614-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=1233bp|location=Sequence derived from alignment at ACJE01000006.1:1616863..1617399+ (Aspergillus niger ATCC 1015)
GAGTGCATCGCTGCTTATAAAGAGCTTCTATACAGAAGGGGGGCAGATAA
ACCTGCATTCGTTATCTACAAGATATCCGACGACGAACGCTCTATCGTCG
TGGAAGAAAGCTCCCCGGAGAAGAACTACGAGGCATTCCTCCAAAAGCTT
ACATCCGCACATGATAGTGACAGGAAACCTGCACCTCGATATGCAATATA
TGACGTGGAGTATGACTTGCTTGAAGACGGTAGGAGAGCGACAATTGTCT
TTATCAGCTGGATGCCCGATGTGACGTCTACCCGGATCCGTATGCTCTAT
GCTTCTACCAAGGAGCAGCTCCGAAAGGCTCTCGATGTCAAAGTATCCAT
CCATGCTGATAATTTGCATGATATTGAATGGAAGACGGTGTTAAAAGAAG
CCAGTGGTGGGGAGTGCATCGCTGCTTATAAAGAGCTTCTATACAGAAGG
GGGGCAGATAAACCTGCATTCGTTATCTACAAGATATCCGACGACGAACG
CTCTATCGTCGTGGAAGAAAGCTCCCCGGAGAAGAACTACGAGGCATTCC
TCCAAAAGCTTACATCCGCACATGATAGTGACAGGAAACCTGCACCTCGA
TATGCAATATATGACGTGGAGTATGACTTGCTTGAAGACGGTAGGAGAGC
GACAATTGTCTTTATCAGCTGGATGCCCGATGTGACGTCTACCCGGATCC
GTATGCTCTATGCTTCTACCAAGGAGCAGCTCCGAAAGGCTCTCGATGTC
AAAGTATCCATCCATGCTGATAATTTGCATGATATTGAATGGAAGACGGT
GTTAAAAGAAGCCAGTGGTGGGGAGTGCATCGCTGCTTATAAAGAGCTTC
TATACAGAAGGGGGGCAGATAAACCTGCATTCGTTATCTACAAGATATCC
GACGACGAACGCTCTATCGTCGTGGAAGAAAGCTCCCCGGAGAAGAACTA
CGAGGCATTCCTCCAAAAGCTTACATCCGCACATGATAGTGACAGGAAAC
CTGCACCTCGATATGCAATATATGACGTGGAGTATGACTTGCTTGAAGAC
GGTAGGAGAGCGACAATTGTCTTTATCAGCTGGATGCCCGATGTGACGTC
TACCCGGATCCGTATGCTCTATGCTTCTACCAAGGAGCAGCTCCGAAAGG
CTCTCGATGTCAAAGTATCCATCCATGCTGATAATTTGCATGATATTGAA
TGGAAGACGGTGTTAAAAGAAGCCAGTGGTGGG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0015629 | actin cytoskeleton |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0030042 | actin filament depolymerization |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003779 | actin binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR017904 |
| DBxref | InterPro:IPR029006 |
| DBxref | InterPro:IPR002108 |
| DBxref | PFAM:PF00241 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ACJE01000006.1 | supercontig | ACJE01000006.1:1616863..1617399 + |
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