You are here

Home

ASPNIDRAFT_143961-T1, ASPNIDRAFT_143961-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_143961-T1
Unique NameASPNIDRAFT_143961-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000001.1:1314290..1314717-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_143961-T1 ID=ASPNIDRAFT_143961-T1|Name=ASPNIDRAFT_143961-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=428bp|location=Sequence derived from alignment at ACJE01000001.1:1314290..1314717- (Aspergillus niger ATCC 1015)
ATAGGCTGGGGCACCCTTTGCGTCGGTAAGAAGCAGTTCCCGGAACAAAT
CCAAGCATCCATAAATCTAACATCGGAATTACAACAGCTGGCGGCGGAGC
CTACTACTTTGCTAAGAAATCCATCAACGCCGACCGTCAGACCCGATTCG
AAGCGGAAGTGAAGCGCAAGGCGCAGCTGGCTGCGATGGAAGCCGAGCAC
CGACGCCAGAACGCCCCGAACAATGCCCCGACTCCTAGTCCGACCGAAGA
TCCGAGCCTGAAGCGCGCCCAGTTAGTGCGTGCCGATGATGTGGCCTCGC
CGAGTGCTGAAGCTAGCCATGACCCCGCACCGACTCGTCACGAACCGGAG
ACAGAAGCTGAGCGGGTGCTGGAGAAGAGTAAATATGAGGCTACGCAGCC
TTTCCGGCCTCCGAGGGGAAACCGCTTG
back to top

Coding sequence (CDS) from alignment at ACJE01000001.1:1314290..1314717-

>ASPNIDRAFT_143961-T1 ID=ASPNIDRAFT_143961-T1|Name=ASPNIDRAFT_143961-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=981bp|location=Sequence derived from alignment at ACJE01000001.1:1314290..1314717- (Aspergillus niger ATCC 1015)
TGCGTGCCGATGATGTGGCCTCGCCGAGTGCTGAAGCTAGCCATGACCCC
GCACCGACTCGTCACGAACCGGAGACAGAAGCTGAGCGGGTGCTGGAGAA
GAGTAAATATGAGGCTACGCAGCCTTTCCGGCCTCCGAGGGGAAACCGCT
TGCTGGCGGCGGAGCCTACTACTTTGCTAAGAAATCCATCAACGCCGACC
GTCAGACCCGATTCGAAGCGGAAGTGAAGCGCAAGGCGCAGCTGGCTGCG
ATGGAAGCCGAGCACCGACGCCAGAACGCCCCGAACAATGCCCCGACTCC
TAATAGGCTGGGGCACCCTTTGCGTCGTGCGTGCCGATGATGTGGCCTCG
CCGAGTGCTGAAGCTAGCCATGACCCCGCACCGACTCGTCACGAACCGGA
GACAGAAGCTGAGCGGGTGCTGGAGAAGAGTAAATATGAGGCTACGCAGC
CTTTCCGGCCTCCGAGGGGAAACCGCTTGCTGGCGGCGGAGCCTACTACT
TTGCTAAGAAATCCATCAACGCCGACCGTCAGACCCGATTCGAAGCGGAA
GTGAAGCGCAAGGCGCAGCTGGCTGCGATGGAAGCCGAGCACCGACGCCA
GAACGCCCCGAACAATGCCCCGACTCCTAATAGGCTGGGGCACCCTTTGC
GTCGTGCGTGCCGATGATGTGGCCTCGCCGAGTGCTGAAGCTAGCCATGA
CCCCGCACCGACTCGTCACGAACCGGAGACAGAAGCTGAGCGGGTGCTGG
AGAAGAGTAAATATGAGGCTACGCAGCCTTTCCGGCCTCCGAGGGGAAAC
CGCTTGCTGGCGGCGGAGCCTACTACTTTGCTAAGAAATCCATCAACGCC
GACCGTCAGACCCGATTCGAAGCGGAAGTGAAGCGCAAGGCGCAGCTGGC
TGCGATGGAAGCCGAGCACCGACGCCAGAACGCCCCGAACAATGCCCCGA
CTCCTAATAGGCTGGGGCACCCTTTGCGTCG
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ASPNIDRAFT_143961ASPNIDRAFT_143961Aspergillus niger ATCC 1015gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_143961-T1ASPNIDRAFT_143961-T1-proteinAspergillus niger ATCC 1015polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_143961-T1.cdsASPNIDRAFT_143961-T1.cdsAspergillus niger ATCC 1015CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_143961-T1.exon3ASPNIDRAFT_143961-T1.exon3Aspergillus niger ATCC 1015exon
ASPNIDRAFT_143961-T1.exon2ASPNIDRAFT_143961-T1.exon2Aspergillus niger ATCC 1015exon
ASPNIDRAFT_143961-T1.exon1ASPNIDRAFT_143961-T1.exon1Aspergillus niger ATCC 1015exon


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR031833
DBxrefPFAM:PF15932
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000001.1supercontigACJE01000001.1:1314290..1314717 -
Powered by Drupal