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ASPNIDRAFT_170414-T1, ASPNIDRAFT_170414-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_170414-T1
Unique NameASPNIDRAFT_170414-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000004.1:2424907..2425788+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_170414-T1 ID=ASPNIDRAFT_170414-T1|Name=ASPNIDRAFT_170414-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=882bp|location=Sequence derived from alignment at ACJE01000004.1:2424907..2425788+ (Aspergillus niger ATCC 1015)
ATGTCTTCATACGCGATCACTGGCGCCTCCAAAGGCATCGGCCGTGAATT
CGTGCGCCAACTCGCCGCCGACTCAGCCAACAGAGTCCTGGCAGTCGTGC
GAGACCCCGAATCAGCCGAAATATCAGATCTCGTATCCAAGCACTCCAAT
GTACACATCATCAAAGGCGATGTCACGGACCCAAAATCCATTCTAGAGGC
GGCCACAGCCGCAGCCGCCATTACTGACGGCAAGCTCGACGTGCTCATCC
ACAATTCCAACGCCGTCGACAAGGCTAGCATGGCCTGTACCCCAAGCCAA
CTACCATTCGACGCTCAAGCAATTCAAGAAATATTCAACCCGTCGCTCAA
CACAGCTATCTACGGCGGTCTATGGGCGACGAACGCCTTCCTACCCTTGA
TCGAGAAGGGAGTGCAGAAGAAGATTGTGCACATCTCTAGCGGCATGGCA
GACGTAGAGCTTATCAATAAGGCTGGTATCAGTAACGCCGTTGCGTATTC
TATTGCAAAAGCGGGAATGAATGTTGTGGTTGCAAAGTACGCGGCGGAGC
TTGCGCCTAAAGGGATCAAGGTTTTGGCTTTGAGCCCGGGGTGGGTTGAT
ACATGGGAGGGTAAGTCAATTCCACTGCCCTTGACTTATTCGTTCATTGG
TCTGTAGAACAGGGATGCTAATATAGTCGGTACAACAGGTGAGAAACCCG
CTGGGGTAGTATACGCAAATGAGCTCTTGCTGAAAAAGTTCCAGCTGGTT
GAGCCTGAGCTCAGGGAGCAGATCCAGCCCGAAGAGAGTGTTAAGAAGTG
TCTCCAGGTGATTGAGCGCTTGGATGCTAAGTCTAGCGGGTTGTTCTTGA
GTCATAATGGGGATAAGTCAAGGTGGTTTTGA
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Coding sequence (CDS) from alignment at ACJE01000004.1:2424907..2425788+

>ASPNIDRAFT_170414-T1 ID=ASPNIDRAFT_170414-T1|Name=ASPNIDRAFT_170414-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=1608bp|location=Sequence derived from alignment at ACJE01000004.1:2424907..2425788+ (Aspergillus niger ATCC 1015)
ATGTCTTCATACGCGATCACTGGCGCCTCCAAAGGCATCGGCCGTGAATT
CGTGCGCCAACTCGCCGCCGACTCAGCCAACAGAGTCCTGGCAGTCGTGC
GAGACCCCGAATCAGCCGAAATATCAGATCTCGTATCCAAGCACTCCAAT
GTACACATCATCAAAGGCGATGTCACGGACCCAAAATCCATTCTAGAGGC
GGCCACAGCCGCAGCCGCCATTACTGACGGCAAGCTCGACGTGCTCATCC
ACAATTCCAACGCCGTCGACAAGGCTAGCATGGCCTGTACCCCAAGCCAA
CTACCATTCGACGCTCAAGCAATTCAAGAAATATTCAACCCGTCGCTCAA
CACAGCTATCTACGGCGGTCTATGGGCGACGAACGCCTTCCTACCCTTGA
TCGAGAAGGGAGTGCAGAAGAAGATTGTGCACATCTCTAGCGGCATGGCA
GACGTAGAGCTTATCAATAAGGCTGGTATCAGTAACGCCGTTGCGTATTC
TATTGCAAAAGCGGGAATGAATGTTGTGGTTGCAAAGTACGCGGCGGAGC
TTGCGCCTAAAGGGATCAAGGTTTTGGCTTTGAGCCCGGGGTGGGTTGAT
ACATGGGAGGGTGAGAAACCCGCTGGGGTAGTATACGCAAATGAGCTCTT
GCTGAAAAAGTTCCAGCTGGTTGAGCCTGAGCTCAGGGAGCAGATCCAGC
CCGAAGAGAGTGTTAAGAAGTGTCTCCAGGTGATTGAGCGCTTGGATGCT
AAGTCTAGCGGGTTGTTCTTGAGTCATAATGGGGATAAGTCAAGGTGGTT
TTGAATGTCTTCATACGCGATCACTGGCGCCTCCAAAGGCATCGGCCGTG
AATTCGTGCGCCAACTCGCCGCCGACTCAGCCAACAGAGTCCTGGCAGTC
GTGCGAGACCCCGAATCAGCCGAAATATCAGATCTCGTATCCAAGCACTC
CAATGTACACATCATCAAAGGCGATGTCACGGACCCAAAATCCATTCTAG
AGGCGGCCACAGCCGCAGCCGCCATTACTGACGGCAAGCTCGACGTGCTC
ATCCACAATTCCAACGCCGTCGACAAGGCTAGCATGGCCTGTACCCCAAG
CCAACTACCATTCGACGCTCAAGCAATTCAAGAAATATTCAACCCGTCGC
TCAACACAGCTATCTACGGCGGTCTATGGGCGACGAACGCCTTCCTACCC
TTGATCGAGAAGGGAGTGCAGAAGAAGATTGTGCACATCTCTAGCGGCAT
GGCAGACGTAGAGCTTATCAATAAGGCTGGTATCAGTAACGCCGTTGCGT
ATTCTATTGCAAAAGCGGGAATGAATGTTGTGGTTGCAAAGTACGCGGCG
GAGCTTGCGCCTAAAGGGATCAAGGTTTTGGCTTTGAGCCCGGGGTGGGT
TGATACATGGGAGGGTGAGAAACCCGCTGGGGTAGTATACGCAAATGAGC
TCTTGCTGAAAAAGTTCCAGCTGGTTGAGCCTGAGCTCAGGGAGCAGATC
CAGCCCGAAGAGAGTGTTAAGAAGTGTCTCCAGGTGATTGAGCGCTTGGA
TGCTAAGTCTAGCGGGTTGTTCTTGAGTCATAATGGGGATAAGTCAAGGT
GGTTTTGA
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ASPNIDRAFT_170414ASPNIDRAFT_170414Aspergillus niger ATCC 1015gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_170414-T1.exon1ASPNIDRAFT_170414-T1.exon1Aspergillus niger ATCC 1015exon
ASPNIDRAFT_170414-T1.exon2ASPNIDRAFT_170414-T1.exon2Aspergillus niger ATCC 1015exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_170414-T1.cdsASPNIDRAFT_170414-T1.cdsAspergillus niger ATCC 1015CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_170414-T1ASPNIDRAFT_170414-T1-proteinAspergillus niger ATCC 1015polypeptide


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR036291
DBxrefInterPro:IPR002347
DBxrefPFAM:PF08659
DBxrefPFAM:PF13561
DBxrefPFAM:PF00106
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000004.1supercontigACJE01000004.1:2424907..2425788 +
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