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ASPNIDRAFT_170508-T1, ASPNIDRAFT_170508-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_170508-T1
Unique NameASPNIDRAFT_170508-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000004.1:1256559..1257473+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_170508-T1 ID=ASPNIDRAFT_170508-T1|Name=ASPNIDRAFT_170508-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=915bp|location=Sequence derived from alignment at ACJE01000004.1:1256559..1257473+ (Aspergillus niger ATCC 1015)
ATGCGATGGCCGCCATGGGCTTCCAACACGCAAGCCTCCAACAATGACCA
CCCTACCACCACGAACAACAATGACCCCAAGAACCTACTCGACTGGAGCG
CCTTCACCGAACTCCGCACCCTCATCCCAACTCTAGTCCTCACAACCGGC
ATCCTCAGCGCCTTCACCCTGCACCGGAACTACCTCCGCCGGTTCCCCAC
AGCAGTCAACATCACGCCCGCATATTACCGTCGCCGCAGCATCCTGGGAA
AAGTAACCAGCGTCGGTGACGGCGACAACTTTCGCATCTATCATACACCC
GGCGGAAGACTCGCGGGTTGGGGCTGGGTACCCTGGAAGAAGGTTCCCAC
GACGCGGAAGGAATTGAGAGATCAGACTGTATGTATACCTCCCCACTTTT
TTTTTTTTCATCTACGTTTATGCTACCGGAGACTATATTTCTAACATCAG
AATGAAATTAAATAGATCCATGTCCGGATAGCTGGTGTCGACGCCCCCGA
ACAAGCGCACTTCGGACGCCCCGCGCAACCCTTCGGCAAAGAAGCACACG
AGTGGCTAACGGGGTACTTGATAAACCGGCGCGTGCGGATATATGTGCAT
CGACAGGACCAGTATCAGCGTGTGGTGGCGACGGTGTTTGTGCGGCGGGC
GCTGGATTTCCCGGTTCCGTTTCGCAGGCGCGATGTCGGGTATGAGATGT
TGAGGAAGGGGTTGGCAACAGTGTATGAGGCGAAGGTTGGGGCGGAGTTT
GGGGGTGAGGTGATGGAGAAGAAGTATCGGAGTGCGGAGTGGTGGGCGAA
GGCGAGGGGGTTGGGGCTGTGGAAGGGGTTCAAGAAGAATAGGGATGCGT
GGGAGAGTCCGAGGGAGTTTAAGACTAGGACGGGGATGGAAGATGTGGGG
GATGGGAAGAAGTAG
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Coding sequence (CDS) from alignment at ACJE01000004.1:1256559..1257473+

>ASPNIDRAFT_170508-T1 ID=ASPNIDRAFT_170508-T1|Name=ASPNIDRAFT_170508-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=1656bp|location=Sequence derived from alignment at ACJE01000004.1:1256559..1257473+ (Aspergillus niger ATCC 1015)
ATGCGATGGCCGCCATGGGCTTCCAACACGCAAGCCTCCAACAATGACCA
CCCTACCACCACGAACAACAATGACCCCAAGAACCTACTCGACTGGAGCG
CCTTCACCGAACTCCGCACCCTCATCCCAACTCTAGTCCTCACAACCGGC
ATCCTCAGCGCCTTCACCCTGCACCGGAACTACCTCCGCCGGTTCCCCAC
AGCAGTCAACATCACGCCCGCATATTACCGTCGCCGCAGCATCCTGGGAA
AAGTAACCAGCGTCGGTGACGGCGACAACTTTCGCATCTATCATACACCC
GGCGGAAGACTCGCGGGTTGGGGCTGGGTACCCTGGAAGAAGGTTCCCAC
GACGCGGAAGGAATTGAGAGATCAGACTATCCATGTCCGGATAGCTGGTG
TCGACGCCCCCGAACAAGCGCACTTCGGACGCCCCGCGCAACCCTTCGGC
AAAGAAGCACACGAGTGGCTAACGGGGTACTTGATAAACCGGCGCGTGCG
GATATATGTGCATCGACAGGACCAGTATCAGCGTGTGGTGGCGACGGTGT
TTGTGCGGCGGGCGCTGGATTTCCCGGTTCCGTTTCGCAGGCGCGATGTC
GGGTATGAGATGTTGAGGAAGGGGTTGGCAACAGTGTATGAGGCGAAGGT
TGGGGCGGAGTTTGGGGGTGAGGTGATGGAGAAGAAGTATCGGAGTGCGG
AGTGGTGGGCGAAGGCGAGGGGGTTGGGGCTGTGGAAGGGGTTCAAGAAG
AATAGGGATGCGTGGGAGAGTCCGAGGGAGTTTAAGACTAGGACGGGGAT
GGAAGATGTGGGGGATGGGAAGAAGTAGATGCGATGGCCGCCATGGGCTT
CCAACACGCAAGCCTCCAACAATGACCACCCTACCACCACGAACAACAAT
GACCCCAAGAACCTACTCGACTGGAGCGCCTTCACCGAACTCCGCACCCT
CATCCCAACTCTAGTCCTCACAACCGGCATCCTCAGCGCCTTCACCCTGC
ACCGGAACTACCTCCGCCGGTTCCCCACAGCAGTCAACATCACGCCCGCA
TATTACCGTCGCCGCAGCATCCTGGGAAAAGTAACCAGCGTCGGTGACGG
CGACAACTTTCGCATCTATCATACACCCGGCGGAAGACTCGCGGGTTGGG
GCTGGGTACCCTGGAAGAAGGTTCCCACGACGCGGAAGGAATTGAGAGAT
CAGACTATCCATGTCCGGATAGCTGGTGTCGACGCCCCCGAACAAGCGCA
CTTCGGACGCCCCGCGCAACCCTTCGGCAAAGAAGCACACGAGTGGCTAA
CGGGGTACTTGATAAACCGGCGCGTGCGGATATATGTGCATCGACAGGAC
CAGTATCAGCGTGTGGTGGCGACGGTGTTTGTGCGGCGGGCGCTGGATTT
CCCGGTTCCGTTTCGCAGGCGCGATGTCGGGTATGAGATGTTGAGGAAGG
GGTTGGCAACAGTGTATGAGGCGAAGGTTGGGGCGGAGTTTGGGGGTGAG
GTGATGGAGAAGAAGTATCGGAGTGCGGAGTGGTGGGCGAAGGCGAGGGG
GTTGGGGCTGTGGAAGGGGTTCAAGAAGAATAGGGATGCGTGGGAGAGTC
CGAGGGAGTTTAAGACTAGGACGGGGATGGAAGATGTGGGGGATGGGAAG
AAGTAG
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
LCL3ASPNIDRAFT_170508Aspergillus niger ATCC 1015gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_170508-T1.exon1ASPNIDRAFT_170508-T1.exon1Aspergillus niger ATCC 1015exon
ASPNIDRAFT_170508-T1.exon2ASPNIDRAFT_170508-T1.exon2Aspergillus niger ATCC 1015exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_170508-T1.cdsASPNIDRAFT_170508-T1.cdsAspergillus niger ATCC 1015CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_170508-T1ASPNIDRAFT_170508-T1-proteinAspergillus niger ATCC 1015polypeptide


Properties
Property NameValue
NoteEggNog:ENOG41
NoteBUSCO:EOG092644K0
DBxrefInterPro:IPR035437
DBxrefInterPro:IPR016071
DBxrefPFAM:PF00565
Productputative endonuclease lcl3
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000004.1supercontigACJE01000004.1:1256559..1257473 +
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