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ASPNIDRAFT_170909-T1, ASPNIDRAFT_170909-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_170909-T1
Unique NameASPNIDRAFT_170909-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000004.1:2178322..2179090+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_170909-T1 ID=ASPNIDRAFT_170909-T1|Name=ASPNIDRAFT_170909-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=769bp|location=Sequence derived from alignment at ACJE01000004.1:2178322..2179090+ (Aspergillus niger ATCC 1015)
ATGGAACAACAACCGCTCCAGCCGCAGCAGGGCGAACTGAACTGGCGCCT
CAGTGCCCATCCGATTACTCTCCTGTTCTTCCTGGGCTTTCGCATCGGCG
CCCTACTGATGTACCTCTTCGGCGTGCTCTTTATCAAGAACTTGTGCGTA
AAACACCTTTCAAACTCAACTTCAAGATTCTAGCTCCCTTAATCTCCAAA
CCCGGAACCTCCCAGAGCTACCCTATCTAGATCCGAGCAAACAACCAAGC
TAACCACTGCAACCAGCGTCCTCGTCTTCATCATCACCCTCCTCATCCTT
TCCGCCGATTTCTACTACCTCAAAAACATCGCCGGTCGCCGACTGGTCGG
TCTCCGTTGGTGGAACGAAGTCAACACTTCCTCCGGCGACTCTACTTGGG
TCTTCGAGTCCTCCGATCCCACTACCCGCACCATCACCGCCACGGACAAA
CGCTTCTTCTGGCTGAGTCTATACGTGACGCCTGCACTATGGATCGGTCT
CGCCATTTTGGCCATTATTCGTTTGAGCAGTGTGATTTGGTTGAGTCTTG
TTGGTGAGTTTATCCTTGCACTCGTTCTCCCAGCAGGTATATAAGGAGCG
TGGATGCTAACTGTATACAGCCATTGCCCTCGCCTTGACCATCACCAACA
CTGTTGCGTTTTCCCGGTGCGATCGCTTCAGTCAGGCTTCTACCTTCGCG
AATAGTGCGCTTTCGGGTGGAGTTATGAGTAACCTTGCGGGAGGCCTGCT
GGGCAGGCTTTTCAAGTAG
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Coding sequence (CDS) from alignment at ACJE01000004.1:2178322..2179090+

>ASPNIDRAFT_170909-T1 ID=ASPNIDRAFT_170909-T1|Name=ASPNIDRAFT_170909-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=1737bp|location=Sequence derived from alignment at ACJE01000004.1:2178322..2179090+ (Aspergillus niger ATCC 1015)
ATGGAACAACAACCGCTCCAGCCGCAGCAGGGCGAACTGAACTGGCGCCT
CAGTGCCCATCCGATTACTCTCCTGTTCTTCCTGGGCTTTCGCATCGGCG
CCCTACTGATGTACCTCTTCGGCGTGCTCTTTATCAAGAACTTCGTCCTC
GTCTTCATCATCACCCTCCTCATCCTTTCCGCCGATTTCTACTACCTCAA
AAACATCGCCGGTCGCCGACTGGTCGGTCTCCGTTGGTGGAACGAAGTCA
ACACTTCCTCCGGCGACTCTACTTGGGTCTTCGAGTCCTCCGATCCCACT
ACCCGCACCATCACCGCCACGGACAAACGCTTCTTCTGGCTGAGTCTATA
CGTGACGCCTGCACTATGGATCGGTCTCGCCATTTTGGCCATTATTCGTT
TGAGCAGTGTGATTTGGTTGAGTCTTGTTGCCATTGCCCTCGCCTTGACC
ATCACCAACACTGTTGCGTTTTCCCGGTGCGATCGCTTCAGTCAGGCTTC
TACCTTCGCGAATAGTGCGCTTTCGGGTGGAGTTATGAGTAACCTTGCGG
GAGGCCTGCTGGGCAGGCTTTTCAAGTAGATGGAACAACAACCGCTCCAG
CCGCAGCAGGGCGAACTGAACTGGCGCCTCAGTGCCCATCCGATTACTCT
CCTGTTCTTCCTGGGCTTTCGCATCGGCGCCCTACTGATGTACCTCTTCG
GCGTGCTCTTTATCAAGAACTTCGTCCTCGTCTTCATCATCACCCTCCTC
ATCCTTTCCGCCGATTTCTACTACCTCAAAAACATCGCCGGTCGCCGACT
GGTCGGTCTCCGTTGGTGGAACGAAGTCAACACTTCCTCCGGCGACTCTA
CTTGGGTCTTCGAGTCCTCCGATCCCACTACCCGCACCATCACCGCCACG
GACAAACGCTTCTTCTGGCTGAGTCTATACGTGACGCCTGCACTATGGAT
CGGTCTCGCCATTTTGGCCATTATTCGTTTGAGCAGTGTGATTTGGTTGA
GTCTTGTTGCCATTGCCCTCGCCTTGACCATCACCAACACTGTTGCGTTT
TCCCGGTGCGATCGCTTCAGTCAGGCTTCTACCTTCGCGAATAGTGCGCT
TTCGGGTGGAGTTATGAGTAACCTTGCGGGAGGCCTGCTGGGCAGGCTTT
TCAAGTAGATGGAACAACAACCGCTCCAGCCGCAGCAGGGCGAACTGAAC
TGGCGCCTCAGTGCCCATCCGATTACTCTCCTGTTCTTCCTGGGCTTTCG
CATCGGCGCCCTACTGATGTACCTCTTCGGCGTGCTCTTTATCAAGAACT
TCGTCCTCGTCTTCATCATCACCCTCCTCATCCTTTCCGCCGATTTCTAC
TACCTCAAAAACATCGCCGGTCGCCGACTGGTCGGTCTCCGTTGGTGGAA
CGAAGTCAACACTTCCTCCGGCGACTCTACTTGGGTCTTCGAGTCCTCCG
ATCCCACTACCCGCACCATCACCGCCACGGACAAACGCTTCTTCTGGCTG
AGTCTATACGTGACGCCTGCACTATGGATCGGTCTCGCCATTTTGGCCAT
TATTCGTTTGAGCAGTGTGATTTGGTTGAGTCTTGTTGCCATTGCCCTCG
CCTTGACCATCACCAACACTGTTGCGTTTTCCCGGTGCGATCGCTTCAGT
CAGGCTTCTACCTTCGCGAATAGTGCGCTTTCGGGTGGAGTTATGAGTAA
CCTTGCGGGAGGCCTGCTGGGCAGGCTTTTCAAGTAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
TVP23ASPNIDRAFT_170909Aspergillus niger ATCC 1015gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_170909-T1.exon1ASPNIDRAFT_170909-T1.exon1Aspergillus niger ATCC 1015exon
ASPNIDRAFT_170909-T1.exon2ASPNIDRAFT_170909-T1.exon2Aspergillus niger ATCC 1015exon
ASPNIDRAFT_170909-T1.exon3ASPNIDRAFT_170909-T1.exon3Aspergillus niger ATCC 1015exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_170909-T1.cdsASPNIDRAFT_170909-T1.cdsAspergillus niger ATCC 1015CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_170909-T1ASPNIDRAFT_170909-T1-proteinAspergillus niger ATCC 1015polypeptide


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR008564
DBxrefPFAM:PF05832
ProductGolgi apparatus membrane protein tvp23
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000004.1supercontigACJE01000004.1:2178322..2179090 +
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