You are here

Home

ASPNIDRAFT_172005-T1, ASPNIDRAFT_172005-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_172005-T1
Unique NameASPNIDRAFT_172005-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000004.1:1658537..1659624-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_172005-T1 ID=ASPNIDRAFT_172005-T1|Name=ASPNIDRAFT_172005-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=1088bp|location=Sequence derived from alignment at ACJE01000004.1:1658537..1659624- (Aspergillus niger ATCC 1015)
ATGGCGTCTTCTGCAACAATTCGGTCGCTTCAGCGGAAACATCCCCTGCA
GCGCCTGTCCAGCCCGTCTAGAGGCTTCTCGGCCTTGGTCCATGTGAGCA
CTTATCCGTGTCGGTCGCTCGTTCCTTGGGCTGATGTTTCTTTCCCCCAT
GGCAGTCTCTTGGTCTAGCCAGCTTCTTCTTCTCGTTCAAGTAGTACGTT
GAGTTCCGCTACAGCTCGTGCTCCCCGGTGCTCGGCCCGCCCACTAACCA
ACCGTTCTCTAGCATGCACGAGAACCCCAATAGGGCGTAAGCTCCCCATG
TCCTTGGCCTGGAGTAACCAGGATGCTGATTGACCCTTCCTGACAGTAAT
GAAGCATATGGCTGGCATTTCCAGTACCTGACCGTCATTGGGCTGACGCT
GGCCACGCTCACCTTTACCGCCGGTCTGCTGGCGGATATGACGTTATCGG
CTCGGCTATTTTTAGCCAAGAACCTTCTTTCTGTATGCAGCGCTCCAATG
GAAGTGTTGATCAGCATCCTATACTGGGGGCTCCGTCTGGTAATTACTTT
CCTCATGGTCGATTAGAATGCCATCTAATTGTCCAACAGATCGACAAGCG
TTTGGTTGTTCCTGATTGGGTGATACTTCCTATGCATGCCGGTAAGCCGG
ACTCGGATCTACTTGAAGTCTCATCTTGCTAATATCGAGTGCAAGACGTC
GGCTTCCATGCTGTACCGTCGATTGTATTACTGATTGACCTTCTTTTTCT
TTCCCCTCCTTGGACGATTACTGTTCTCCCTGCACTAGCTCTGTCCAGTA
CAATCGCTTTTGGATACTGGTTTTGGATCGAACGTTGCTTCCAGTTCAAC
GGATGGTACGTCTTGTATTTGCCTTTATGGAGATGCGACTTACTGACCGC
ACAGGTATCCTTACCCCGTCTTCGATGCTGTAGGATTTGAGGGTCGCGTT
GGACTCTTCGCCTTGAGCGCCGTTGTCATGGCGCTGAGCACGGGAACCCT
CAAATGGCTCTATGGCCGCGTGAACGGATACGGAACGAGCGCCAAAGCCC
AGTCTCGTCCTGGAGCGATCAAAAGCAACGGCAGTATC
back to top

Coding sequence (CDS) from alignment at ACJE01000004.1:1658537..1659624-

>ASPNIDRAFT_172005-T1 ID=ASPNIDRAFT_172005-T1|Name=ASPNIDRAFT_172005-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=5250bp|location=Sequence derived from alignment at ACJE01000004.1:1658537..1659624- (Aspergillus niger ATCC 1015)
GTATCCTTACCCCGTCTTCGATGCTGTAGGATTTGAGGGTCGCGTTGGAC
TCTTCGCCTTGAGCGCCGTTGTCATGGCGCTGAGCACGGGAACCCTCAAA
TGGCTCTATGGCCGCGTGAACGGATACGGAACGAGCGCCAAAGCCCAGTC
TCGTCCTGGAGCGATCAAAAGCAACGGCAGTATCTGCAAGACGTCGGCTT
CCATGCTGTACCGTCGATTGTATTACTGATTGACCTTCTTTTTCTTTCCC
CTCCTTGGACGATTACTGTTCTCCCTGCACTAGCTCTGTCCAGTACAATC
GCTTTTGGATACTGGTTTTGGATCGAACGTTGCTTCCAGTTCAACGGATG
ATCGACAAGCGTTTGGTTGTTCCTGATTGGGTGATACTTCCTATGCATGC
CGTAATGAAGCATATGGCTGGCATTTCCAGTACCTGACCGTCATTGGGCT
GACGCTGGCCACGCTCACCTTTACCGCCGGTCTGCTGGCGGATATGACGT
TATCGGCTCGGCTATTTTTAGCCAAGAACCTTCTTTCTGTATGCAGCGCT
CCAATGGAAGTGTTGATCAGCATCCTATACTGGGGGCTCCGTCTGCATGC
ACGAGAACCCCAATAGGGCTCTCTTGGTCTAGCCAGCTTCTTCTTCTCGT
TCAAGTAATGGCGTCTTCTGCAACAATTCGGTCGCTTCAGCGGAAACATC
CCCTGCAGCGCCTGTCCAGCCCGTCTAGAGGCTTCTCGGCCTTGGTCCAT
GTATCCTTACCCCGTCTTCGATGCTGTAGGATTTGAGGGTCGCGTTGGAC
TCTTCGCCTTGAGCGCCGTTGTCATGGCGCTGAGCACGGGAACCCTCAAA
TGGCTCTATGGCCGCGTGAACGGATACGGAACGAGCGCCAAAGCCCAGTC
TCGTCCTGGAGCGATCAAAAGCAACGGCAGTATCTGCAAGACGTCGGCTT
CCATGCTGTACCGTCGATTGTATTACTGATTGACCTTCTTTTTCTTTCCC
CTCCTTGGACGATTACTGTTCTCCCTGCACTAGCTCTGTCCAGTACAATC
GCTTTTGGATACTGGTTTTGGATCGAACGTTGCTTCCAGTTCAACGGATG
ATCGACAAGCGTTTGGTTGTTCCTGATTGGGTGATACTTCCTATGCATGC
CGTAATGAAGCATATGGCTGGCATTTCCAGTACCTGACCGTCATTGGGCT
GACGCTGGCCACGCTCACCTTTACCGCCGGTCTGCTGGCGGATATGACGT
TATCGGCTCGGCTATTTTTAGCCAAGAACCTTCTTTCTGTATGCAGCGCT
CCAATGGAAGTGTTGATCAGCATCCTATACTGGGGGCTCCGTCTGCATGC
ACGAGAACCCCAATAGGGCTCTCTTGGTCTAGCCAGCTTCTTCTTCTCGT
TCAAGTAATGGCGTCTTCTGCAACAATTCGGTCGCTTCAGCGGAAACATC
CCCTGCAGCGCCTGTCCAGCCCGTCTAGAGGCTTCTCGGCCTTGGTCCAT
GTATCCTTACCCCGTCTTCGATGCTGTAGGATTTGAGGGTCGCGTTGGAC
TCTTCGCCTTGAGCGCCGTTGTCATGGCGCTGAGCACGGGAACCCTCAAA
TGGCTCTATGGCCGCGTGAACGGATACGGAACGAGCGCCAAAGCCCAGTC
TCGTCCTGGAGCGATCAAAAGCAACGGCAGTATCTGCAAGACGTCGGCTT
CCATGCTGTACCGTCGATTGTATTACTGATTGACCTTCTTTTTCTTTCCC
CTCCTTGGACGATTACTGTTCTCCCTGCACTAGCTCTGTCCAGTACAATC
GCTTTTGGATACTGGTTTTGGATCGAACGTTGCTTCCAGTTCAACGGATG
ATCGACAAGCGTTTGGTTGTTCCTGATTGGGTGATACTTCCTATGCATGC
CGTAATGAAGCATATGGCTGGCATTTCCAGTACCTGACCGTCATTGGGCT
GACGCTGGCCACGCTCACCTTTACCGCCGGTCTGCTGGCGGATATGACGT
TATCGGCTCGGCTATTTTTAGCCAAGAACCTTCTTTCTGTATGCAGCGCT
CCAATGGAAGTGTTGATCAGCATCCTATACTGGGGGCTCCGTCTGCATGC
ACGAGAACCCCAATAGGGCTCTCTTGGTCTAGCCAGCTTCTTCTTCTCGT
TCAAGTAATGGCGTCTTCTGCAACAATTCGGTCGCTTCAGCGGAAACATC
CCCTGCAGCGCCTGTCCAGCCCGTCTAGAGGCTTCTCGGCCTTGGTCCAT
GTATCCTTACCCCGTCTTCGATGCTGTAGGATTTGAGGGTCGCGTTGGAC
TCTTCGCCTTGAGCGCCGTTGTCATGGCGCTGAGCACGGGAACCCTCAAA
TGGCTCTATGGCCGCGTGAACGGATACGGAACGAGCGCCAAAGCCCAGTC
TCGTCCTGGAGCGATCAAAAGCAACGGCAGTATCTGCAAGACGTCGGCTT
CCATGCTGTACCGTCGATTGTATTACTGATTGACCTTCTTTTTCTTTCCC
CTCCTTGGACGATTACTGTTCTCCCTGCACTAGCTCTGTCCAGTACAATC
GCTTTTGGATACTGGTTTTGGATCGAACGTTGCTTCCAGTTCAACGGATG
ATCGACAAGCGTTTGGTTGTTCCTGATTGGGTGATACTTCCTATGCATGC
CGTAATGAAGCATATGGCTGGCATTTCCAGTACCTGACCGTCATTGGGCT
GACGCTGGCCACGCTCACCTTTACCGCCGGTCTGCTGGCGGATATGACGT
TATCGGCTCGGCTATTTTTAGCCAAGAACCTTCTTTCTGTATGCAGCGCT
CCAATGGAAGTGTTGATCAGCATCCTATACTGGGGGCTCCGTCTGCATGC
ACGAGAACCCCAATAGGGCTCTCTTGGTCTAGCCAGCTTCTTCTTCTCGT
TCAAGTAATGGCGTCTTCTGCAACAATTCGGTCGCTTCAGCGGAAACATC
CCCTGCAGCGCCTGTCCAGCCCGTCTAGAGGCTTCTCGGCCTTGGTCCAT
GTATCCTTACCCCGTCTTCGATGCTGTAGGATTTGAGGGTCGCGTTGGAC
TCTTCGCCTTGAGCGCCGTTGTCATGGCGCTGAGCACGGGAACCCTCAAA
TGGCTCTATGGCCGCGTGAACGGATACGGAACGAGCGCCAAAGCCCAGTC
TCGTCCTGGAGCGATCAAAAGCAACGGCAGTATCTGCAAGACGTCGGCTT
CCATGCTGTACCGTCGATTGTATTACTGATTGACCTTCTTTTTCTTTCCC
CTCCTTGGACGATTACTGTTCTCCCTGCACTAGCTCTGTCCAGTACAATC
GCTTTTGGATACTGGTTTTGGATCGAACGTTGCTTCCAGTTCAACGGATG
ATCGACAAGCGTTTGGTTGTTCCTGATTGGGTGATACTTCCTATGCATGC
CGTAATGAAGCATATGGCTGGCATTTCCAGTACCTGACCGTCATTGGGCT
GACGCTGGCCACGCTCACCTTTACCGCCGGTCTGCTGGCGGATATGACGT
TATCGGCTCGGCTATTTTTAGCCAAGAACCTTCTTTCTGTATGCAGCGCT
CCAATGGAAGTGTTGATCAGCATCCTATACTGGGGGCTCCGTCTGCATGC
ACGAGAACCCCAATAGGGCTCTCTTGGTCTAGCCAGCTTCTTCTTCTCGT
TCAAGTAATGGCGTCTTCTGCAACAATTCGGTCGCTTCAGCGGAAACATC
CCCTGCAGCGCCTGTCCAGCCCGTCTAGAGGCTTCTCGGCCTTGGTCCAT
GTATCCTTACCCCGTCTTCGATGCTGTAGGATTTGAGGGTCGCGTTGGAC
TCTTCGCCTTGAGCGCCGTTGTCATGGCGCTGAGCACGGGAACCCTCAAA
TGGCTCTATGGCCGCGTGAACGGATACGGAACGAGCGCCAAAGCCCAGTC
TCGTCCTGGAGCGATCAAAAGCAACGGCAGTATCTGCAAGACGTCGGCTT
CCATGCTGTACCGTCGATTGTATTACTGATTGACCTTCTTTTTCTTTCCC
CTCCTTGGACGATTACTGTTCTCCCTGCACTAGCTCTGTCCAGTACAATC
GCTTTTGGATACTGGTTTTGGATCGAACGTTGCTTCCAGTTCAACGGATG
ATCGACAAGCGTTTGGTTGTTCCTGATTGGGTGATACTTCCTATGCATGC
CGTAATGAAGCATATGGCTGGCATTTCCAGTACCTGACCGTCATTGGGCT
GACGCTGGCCACGCTCACCTTTACCGCCGGTCTGCTGGCGGATATGACGT
TATCGGCTCGGCTATTTTTAGCCAAGAACCTTCTTTCTGTATGCAGCGCT
CCAATGGAAGTGTTGATCAGCATCCTATACTGGGGGCTCCGTCTGCATGC
ACGAGAACCCCAATAGGGCTCTCTTGGTCTAGCCAGCTTCTTCTTCTCGT
TCAAGTAATGGCGTCTTCTGCAACAATTCGGTCGCTTCAGCGGAAACATC
CCCTGCAGCGCCTGTCCAGCCCGTCTAGAGGCTTCTCGGCCTTGGTCCAT
GTATCCTTACCCCGTCTTCGATGCTGTAGGATTTGAGGGTCGCGTTGGAC
TCTTCGCCTTGAGCGCCGTTGTCATGGCGCTGAGCACGGGAACCCTCAAA
TGGCTCTATGGCCGCGTGAACGGATACGGAACGAGCGCCAAAGCCCAGTC
TCGTCCTGGAGCGATCAAAAGCAACGGCAGTATCTGCAAGACGTCGGCTT
CCATGCTGTACCGTCGATTGTATTACTGATTGACCTTCTTTTTCTTTCCC
CTCCTTGGACGATTACTGTTCTCCCTGCACTAGCTCTGTCCAGTACAATC
GCTTTTGGATACTGGTTTTGGATCGAACGTTGCTTCCAGTTCAACGGATG
ATCGACAAGCGTTTGGTTGTTCCTGATTGGGTGATACTTCCTATGCATGC
CGTAATGAAGCATATGGCTGGCATTTCCAGTACCTGACCGTCATTGGGCT
GACGCTGGCCACGCTCACCTTTACCGCCGGTCTGCTGGCGGATATGACGT
TATCGGCTCGGCTATTTTTAGCCAAGAACCTTCTTTCTGTATGCAGCGCT
CCAATGGAAGTGTTGATCAGCATCCTATACTGGGGGCTCCGTCTGCATGC
ACGAGAACCCCAATAGGGCTCTCTTGGTCTAGCCAGCTTCTTCTTCTCGT
TCAAGTAATGGCGTCTTCTGCAACAATTCGGTCGCTTCAGCGGAAACATC
CCCTGCAGCGCCTGTCCAGCCCGTCTAGAGGCTTCTCGGCCTTGGTCCAT
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ASPNIDRAFT_172005ASPNIDRAFT_172005Aspergillus niger ATCC 1015gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_172005-T1ASPNIDRAFT_172005-T1-proteinAspergillus niger ATCC 1015polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_172005-T1.cdsASPNIDRAFT_172005-T1.cdsAspergillus niger ATCC 1015CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_172005-T1.exon7ASPNIDRAFT_172005-T1.exon7Aspergillus niger ATCC 1015exon
ASPNIDRAFT_172005-T1.exon6ASPNIDRAFT_172005-T1.exon6Aspergillus niger ATCC 1015exon
ASPNIDRAFT_172005-T1.exon5ASPNIDRAFT_172005-T1.exon5Aspergillus niger ATCC 1015exon
ASPNIDRAFT_172005-T1.exon4ASPNIDRAFT_172005-T1.exon4Aspergillus niger ATCC 1015exon
ASPNIDRAFT_172005-T1.exon3ASPNIDRAFT_172005-T1.exon3Aspergillus niger ATCC 1015exon
ASPNIDRAFT_172005-T1.exon2ASPNIDRAFT_172005-T1.exon2Aspergillus niger ATCC 1015exon
ASPNIDRAFT_172005-T1.exon1ASPNIDRAFT_172005-T1.exon1Aspergillus niger ATCC 1015exon


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR006838
DBxrefPFAM:PF04750
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000004.1supercontigACJE01000004.1:1658537..1659624 -
Powered by Drupal