You are here

Home

ASPNIDRAFT_172648-T1, ASPNIDRAFT_172648-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_172648-T1
Unique NameASPNIDRAFT_172648-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000004.1:57669..59321-

Legend: CDSpolypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_172648-T1 ID=ASPNIDRAFT_172648-T1|Name=ASPNIDRAFT_172648-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=1653bp|location=Sequence derived from alignment at ACJE01000004.1:57669..59321- (Aspergillus niger ATCC 1015)
ATGGCTTCCACACAACCGGCTGGGTCCTCTGCACCCTCGTCTAACCTGAA
CTCTCCGATCTTGCCTCCTGGAGGAACACCATTCTTCACCGGTTCCTTTC
CCGATTCTAATGCGAGATCTTCTCCCATACCTACTAGTAACGCCCCTGCG
CAAGCTGATGGATCGAAATCGAAACGCACCAAACGTGATAGCCGCAAAAA
GCGTGAGGCCAAGGGTCTGGATCAGGAAAGCATGCCACCGAAGAAGCGAG
CAGTTGCTGTCCAAAACACTGCACTTCCCAGCTCGGATCTCAGCATACTA
AGGCCTCTCCTGTTGGCAGAGCCTCGCTCATCCGATCTGTTACCCCCACA
ACCCCGGCAGCTGAACTTTGTCAACCGAAAAACATCAGACGTTATCGGTC
AGAGCTGGGACTTTTTTGAGATTGTCGATAAGCTCACCAATAAGAATGGG
TTTCGTTATAGCTACGCCATAGCTGATCCAAGCTTTCCGCATATCAAATA
CCGTCAGACTGATGTCCAGCCCTATCACGCCCGATTTAGTTTCGAAGACT
CTCCAGCTGCCATACTCTTCAGTAAGGACGCTCTCGCAGTTACTTCTAAT
GAGCCTTGGCATACGGCACGAGCCAATGTCTGCGCGCGCGAGGGATCCTA
TTACTACGAAGCGCGCATTATCAGTGGTGTTGTGAATAATTCGCCTGCTC
CCTCTTCTAATAGCAATGGAGGCTTACCGTCCAGGGGGCATGTGCGTCTT
GGTTTTGCACGAAGGGAGGGAGACCTCGATGCCAACGTTGGTGTTGACTG
TTATGGCTACGGTATCCGTGATGTGAATGGTGAGGTCGTCAATCGGATGC
GGTGTGAATACTTTTTTCCAAAAGGCGAATCTATTCGTGAGGGCGACGTT
GTCGGCCTTCTAATCACCCTTCCGCCACTCTCTCTCCACAAGAAAGTTGT
AGAGGGAACTTATGAGTCAAGTGCAGATGGCGAGGTCTCATCACCAAGCT
CAGAAGCCCCGTCAGTCACGAATATAGTTCGTGACCGCATTCCTTTCCAC
TACAAATCAGACTTTTGTTGGCAACAGTCGAACGTGTTTCCAACAAAACA
GCTACGCGACTACGCATTCAATCTCAAAGAAACCCCTACGTTTGGGCCTC
CATCTCCGTTCAATGCCGAGGATGCATCTTTGCGAACGTTACCCGGTTCA
AGCATCACAATATTCAAGAACGGTGTAAAGATGGGCACTCCTTTTGAAGA
ACTGTATGCTTTCTTACCACCGGCCAGCCGACTCGCCAATGGCACAAACA
ACTTGGGCATCGGCGAGCGCGAGAATGCAGATGACGGAATGATCGGTTAT
TATCCTGCTGTCAGCTGCTACGGCGGAGGGGCGGTTGAATGCCGCTTTGA
CGGGCCATGGTGGGTGGGGCCACCATCTCATACGGACAACGGCGAGCCAG
TCCGGGGCATCGGCGAACGCTTCAACGAACAAATAGTTGAGGATATAGTT
GCCGATATCGTGGACGAGGTTGAGGCAATGTGCGTCTGGGGCGGAGTAGA
CGGCAACGTTGTCAACAATGCAAAGATCGATGGCTCTGGAACTGGGGCAG
TTGGTGGCTCCGAGGTGTTGAAAGGTGGTGTTAGTGCGGCTTATGAGTCT
GCT
back to top

Coding sequence (CDS) from alignment at ACJE01000004.1:57669..59321-

>ASPNIDRAFT_172648-T1 ID=ASPNIDRAFT_172648-T1|Name=ASPNIDRAFT_172648-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=1653bp|location=Sequence derived from alignment at ACJE01000004.1:57669..59321- (Aspergillus niger ATCC 1015)
ATGGCTTCCACACAACCGGCTGGGTCCTCTGCACCCTCGTCTAACCTGAA
CTCTCCGATCTTGCCTCCTGGAGGAACACCATTCTTCACCGGTTCCTTTC
CCGATTCTAATGCGAGATCTTCTCCCATACCTACTAGTAACGCCCCTGCG
CAAGCTGATGGATCGAAATCGAAACGCACCAAACGTGATAGCCGCAAAAA
GCGTGAGGCCAAGGGTCTGGATCAGGAAAGCATGCCACCGAAGAAGCGAG
CAGTTGCTGTCCAAAACACTGCACTTCCCAGCTCGGATCTCAGCATACTA
AGGCCTCTCCTGTTGGCAGAGCCTCGCTCATCCGATCTGTTACCCCCACA
ACCCCGGCAGCTGAACTTTGTCAACCGAAAAACATCAGACGTTATCGGTC
AGAGCTGGGACTTTTTTGAGATTGTCGATAAGCTCACCAATAAGAATGGG
TTTCGTTATAGCTACGCCATAGCTGATCCAAGCTTTCCGCATATCAAATA
CCGTCAGACTGATGTCCAGCCCTATCACGCCCGATTTAGTTTCGAAGACT
CTCCAGCTGCCATACTCTTCAGTAAGGACGCTCTCGCAGTTACTTCTAAT
GAGCCTTGGCATACGGCACGAGCCAATGTCTGCGCGCGCGAGGGATCCTA
TTACTACGAAGCGCGCATTATCAGTGGTGTTGTGAATAATTCGCCTGCTC
CCTCTTCTAATAGCAATGGAGGCTTACCGTCCAGGGGGCATGTGCGTCTT
GGTTTTGCACGAAGGGAGGGAGACCTCGATGCCAACGTTGGTGTTGACTG
TTATGGCTACGGTATCCGTGATGTGAATGGTGAGGTCGTCAATCGGATGC
GGTGTGAATACTTTTTTCCAAAAGGCGAATCTATTCGTGAGGGCGACGTT
GTCGGCCTTCTAATCACCCTTCCGCCACTCTCTCTCCACAAGAAAGTTGT
AGAGGGAACTTATGAGTCAAGTGCAGATGGCGAGGTCTCATCACCAAGCT
CAGAAGCCCCGTCAGTCACGAATATAGTTCGTGACCGCATTCCTTTCCAC
TACAAATCAGACTTTTGTTGGCAACAGTCGAACGTGTTTCCAACAAAACA
GCTACGCGACTACGCATTCAATCTCAAAGAAACCCCTACGTTTGGGCCTC
CATCTCCGTTCAATGCCGAGGATGCATCTTTGCGAACGTTACCCGGTTCA
AGCATCACAATATTCAAGAACGGTGTAAAGATGGGCACTCCTTTTGAAGA
ACTGTATGCTTTCTTACCACCGGCCAGCCGACTCGCCAATGGCACAAACA
ACTTGGGCATCGGCGAGCGCGAGAATGCAGATGACGGAATGATCGGTTAT
TATCCTGCTGTCAGCTGCTACGGCGGAGGGGCGGTTGAATGCCGCTTTGA
CGGGCCATGGTGGGTGGGGCCACCATCTCATACGGACAACGGCGAGCCAG
TCCGGGGCATCGGCGAACGCTTCAACGAACAAATAGTTGAGGATATAGTT
GCCGATATCGTGGACGAGGTTGAGGCAATGTGCGTCTGGGGCGGAGTAGA
CGGCAACGTTGTCAACAATGCAAAGATCGATGGCTCTGGAACTGGGGCAG
TTGGTGGCTCCGAGGTGTTGAAAGGTGGTGTTAGTGCGGCTTATGAGTCT
GCT
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ASPNIDRAFT_172648ASPNIDRAFT_172648Aspergillus niger ATCC 1015gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_172648-T1.cdsASPNIDRAFT_172648-T1.cdsAspergillus niger ATCC 1015CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_172648-T1.exon1ASPNIDRAFT_172648-T1.exon1Aspergillus niger ATCC 1015exon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_172648-T1ASPNIDRAFT_172648-T1-proteinAspergillus niger ATCC 1015polypeptide


Properties
Property NameValue
NoteBUSCO:EOG09262X7T
DBxrefInterPro:IPR013320
DBxrefInterPro:IPR001870
DBxrefInterPro:IPR003877
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000004.1supercontigACJE01000004.1:57669..59321 -
Powered by Drupal