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ASPNIDRAFT_173146-T1, ASPNIDRAFT_173146-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_173146-T1
Unique NameASPNIDRAFT_173146-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000010.1:2075713..2076434-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_173146-T1 ID=ASPNIDRAFT_173146-T1|Name=ASPNIDRAFT_173146-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=722bp|location=Sequence derived from alignment at ACJE01000010.1:2075713..2076434- (Aspergillus niger ATCC 1015)
ATGGGTTCCGTCGTTCTGCCACATCTGCGTACAGCCTGGCACGTCGACCA
GGCTATCCTTTCCGAGGAGGACAGACTTGTGGTGTGTATACATATCACCA
AGTCATGGCTGCGAAGCATATCATATCATACTAACCAAACGTATAAAGGT
CATCCGATTCGGTCGCGATCACGATGTCGACTGTACGACGTCACAAATCT
CCCTGATCACACTATGGGTGTAAGCTAACGCAGTGAATCGCAGGCATGCG
TCAGGACGAAGTCCTTTTCAAGATCGCTGAACGTGTGAAGAGTACGTCAA
GAAATCCTTTATCCATTCCTCCTTCCCAAAACGACTTTCTCCGGCAAGAA
GAAATTCGCAGTGACTAACCCCCAACCAGACTTCGCCGTAATCTACCTCT
GCGACATCGACGAGGTACCCGAGTTCAACACGATGTACGAACTCTTCGAC
CCAATGACCATCATGTTTTTCTACCGGAATAAGCACATGATGTGCGATTT
CGGCACAGGTAACAACAACAAGTTGAACTGGGTGCTTGAAGACAAGCAGG
AGATGATCGATATCATCGAGACCATCTACAAGGGCGCGAAGAAGGGACGT
GGTCTGGTCGTCAGCCCGAAGGGTAAGTCTATATACTGTCTTGATTGTCT
TCTTACTGGCTGGATGGTTTTGGCTGATGCATGATATCTGCTGTAGATTA
CTCGACGAGGTACCGTTACTGA
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Coding sequence (CDS) from alignment at ACJE01000010.1:2075713..2076434-

>ASPNIDRAFT_173146-T1 ID=ASPNIDRAFT_173146-T1|Name=ASPNIDRAFT_173146-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=2160bp|location=Sequence derived from alignment at ACJE01000010.1:2075713..2076434- (Aspergillus niger ATCC 1015)
ATTACTCGACGAGGTACCGTTACTGAACTTCGCCGTAATCTACCTCTGCG
ACATCGACGAGGTACCCGAGTTCAACACGATGTACGAACTCTTCGACCCA
ATGACCATCATGTTTTTCTACCGGAATAAGCACATGATGTGCGATTTCGG
CACAGGTAACAACAACAAGTTGAACTGGGTGCTTGAAGACAAGCAGGAGA
TGATCGATATCATCGAGACCATCTACAAGGGCGCGAAGAAGGGACGTGGT
CTGGTCGTCAGCCCGAAGGGCATGCGTCAGGACGAAGTCCTTTTCAAGAT
CGCTGAACGTGTGAAGAGTCATCCGATTCGGTCGCGATCACGATGTCGAC
TATGGGTTCCGTCGTTCTGCCACATCTGCGTACAGCCTGGCACGTCGACC
AGGCTATCCTTTCCGAGGAGGACAGACTTGTGATTACTCGACGAGGTACC
GTTACTGAACTTCGCCGTAATCTACCTCTGCGACATCGACGAGGTACCCG
AGTTCAACACGATGTACGAACTCTTCGACCCAATGACCATCATGTTTTTC
TACCGGAATAAGCACATGATGTGCGATTTCGGCACAGGTAACAACAACAA
GTTGAACTGGGTGCTTGAAGACAAGCAGGAGATGATCGATATCATCGAGA
CCATCTACAAGGGCGCGAAGAAGGGACGTGGTCTGGTCGTCAGCCCGAAG
GGCATGCGTCAGGACGAAGTCCTTTTCAAGATCGCTGAACGTGTGAAGAG
TCATCCGATTCGGTCGCGATCACGATGTCGACTATGGGTTCCGTCGTTCT
GCCACATCTGCGTACAGCCTGGCACGTCGACCAGGCTATCCTTTCCGAGG
AGGACAGACTTGTGATTACTCGACGAGGTACCGTTACTGAACTTCGCCGT
AATCTACCTCTGCGACATCGACGAGGTACCCGAGTTCAACACGATGTACG
AACTCTTCGACCCAATGACCATCATGTTTTTCTACCGGAATAAGCACATG
ATGTGCGATTTCGGCACAGGTAACAACAACAAGTTGAACTGGGTGCTTGA
AGACAAGCAGGAGATGATCGATATCATCGAGACCATCTACAAGGGCGCGA
AGAAGGGACGTGGTCTGGTCGTCAGCCCGAAGGGCATGCGTCAGGACGAA
GTCCTTTTCAAGATCGCTGAACGTGTGAAGAGTCATCCGATTCGGTCGCG
ATCACGATGTCGACTATGGGTTCCGTCGTTCTGCCACATCTGCGTACAGC
CTGGCACGTCGACCAGGCTATCCTTTCCGAGGAGGACAGACTTGTGATTA
CTCGACGAGGTACCGTTACTGAACTTCGCCGTAATCTACCTCTGCGACAT
CGACGAGGTACCCGAGTTCAACACGATGTACGAACTCTTCGACCCAATGA
CCATCATGTTTTTCTACCGGAATAAGCACATGATGTGCGATTTCGGCACA
GGTAACAACAACAAGTTGAACTGGGTGCTTGAAGACAAGCAGGAGATGAT
CGATATCATCGAGACCATCTACAAGGGCGCGAAGAAGGGACGTGGTCTGG
TCGTCAGCCCGAAGGGCATGCGTCAGGACGAAGTCCTTTTCAAGATCGCT
GAACGTGTGAAGAGTCATCCGATTCGGTCGCGATCACGATGTCGACTATG
GGTTCCGTCGTTCTGCCACATCTGCGTACAGCCTGGCACGTCGACCAGGC
TATCCTTTCCGAGGAGGACAGACTTGTGATTACTCGACGAGGTACCGTTA
CTGAACTTCGCCGTAATCTACCTCTGCGACATCGACGAGGTACCCGAGTT
CAACACGATGTACGAACTCTTCGACCCAATGACCATCATGTTTTTCTACC
GGAATAAGCACATGATGTGCGATTTCGGCACAGGTAACAACAACAAGTTG
AACTGGGTGCTTGAAGACAAGCAGGAGATGATCGATATCATCGAGACCAT
CTACAAGGGCGCGAAGAAGGGACGTGGTCTGGTCGTCAGCCCGAAGGGCA
TGCGTCAGGACGAAGTCCTTTTCAAGATCGCTGAACGTGTGAAGAGTCAT
CCGATTCGGTCGCGATCACGATGTCGACTATGGGTTCCGTCGTTCTGCCA
CATCTGCGTACAGCCTGGCACGTCGACCAGGCTATCCTTTCCGAGGAGGA
CAGACTTGTG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0046540U4/U6 x U5 tri-snRNP complex
Vocabulary: Biological Process
TermDefinition
GO:0000398mRNA splicing, via spliceosome
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
DIM1_2ASPNIDRAFT_173146Aspergillus niger ATCC 1015gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_173146-T1ASPNIDRAFT_173146-T1-proteinAspergillus niger ATCC 1015polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_173146-T1.cdsASPNIDRAFT_173146-T1.cdsAspergillus niger ATCC 1015CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_173146-T1.exon5ASPNIDRAFT_173146-T1.exon5Aspergillus niger ATCC 1015exon
ASPNIDRAFT_173146-T1.exon4ASPNIDRAFT_173146-T1.exon4Aspergillus niger ATCC 1015exon
ASPNIDRAFT_173146-T1.exon3ASPNIDRAFT_173146-T1.exon3Aspergillus niger ATCC 1015exon
ASPNIDRAFT_173146-T1.exon2ASPNIDRAFT_173146-T1.exon2Aspergillus niger ATCC 1015exon
ASPNIDRAFT_173146-T1.exon1ASPNIDRAFT_173146-T1.exon1Aspergillus niger ATCC 1015exon


Properties
Property NameValue
NoteBUSCO:EOG0926506U
DBxrefInterPro:IPR036249
DBxrefInterPro:IPR004123
DBxrefPFAM:PF02966
ProductDimethyladenosine transferase
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000010.1supercontigACJE01000010.1:2075713..2076434 -
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