You are here

ASPNIDRAFT_173659-T1, ASPNIDRAFT_173659-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_173659-T1
Unique NameASPNIDRAFT_173659-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000010.1:271704..272303-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_173659-T1 ID=ASPNIDRAFT_173659-T1|Name=ASPNIDRAFT_173659-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=600bp|location=Sequence derived from alignment at ACJE01000010.1:271704..272303- (Aspergillus niger ATCC 1015)
ATGCAATCCTACCCTGGTTCCTGCTTCTGTCACAAAATCACCTATAACCT CAACCTCTCGTCTCCCGACGATGCCCGCACGTCCCTCTGCCATTGCAGCA GCTGCAAGGTTAGCCAGATAGCTCCACGGTTCTGATCTACGATCTACACC TAAACTTTGTCCACAAGGTGTTCAATTGACTAACACCTTTCGGGGTTATA GAAAGCTTTCGGAACAAACTACGGTCTAACCGCCAAGGTCCCCAAAGATG CCCTTCAGATCACATCCGGTAAGCTTAAGGAATACGTGGGTGATAATGGG TCTGGAAGTATGATACATCGGGAGTTTTGTGGCGATTGTGGGAGCTATAT TTGCGAGTATGGGGTATGTTCGTTCGCTCTAAGGGGGCTCGTTTGTGGGA GTGGCATAAGTGCTCTGCTAATGGGTCTTGGACAGGATGCTGTCAAGAAT GATTTCCGGTATATTTGTGTAGGGACATTGGATGATCCGGAAGTGTTGCC GCCGAAGGGAGAGTTTTTCTGTCAGAGTAGGGTTCGTTGGATGCCGGAGA TTCCGGGTGAGTGTCTGGTCTGTCTTGTCTTCATGGTGCGCAATAACTAA
back to top

Coding sequence (CDS) from alignment at ACJE01000010.1:271704..272303-

>ASPNIDRAFT_173659-T1 ID=ASPNIDRAFT_173659-T1|Name=ASPNIDRAFT_173659-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=1305bp|location=Sequence derived from alignment at ACJE01000010.1:271704..272303- (Aspergillus niger ATCC 1015)
GATGCTGTCAAGAATGATTTCCGGTATATTTGTGTAGGGACATTGGATGA
TCCGGAAGTGTTGCCGCCGAAGGGAGAGTTTTTCTGTCAGAGTAGGGTTC
GTTGGATGCCGGAGATTCCGGGTGAGTGTCTGGTCTGTCTTGTCTTCATG
GTGCGCAATAACTAAAAAGCTTTCGGAACAAACTACGGTCTAACCGCCAA
GGTCCCCAAAGATGCCCTTCAGATCACATCCGGTAAGCTTAAGGAATACG
TGGGTGATAATGGGTCTGGAAGTATGATACATCGGGAGTTTTGTGGCGAT
TGTGGGAGCTATATTTGCGAGTATGGGATGCAATCCTACCCTGGTTCCTG
CTTCTGTCACAAAATCACCTATAACCTCAACCTCTCGTCTCCCGACGATG
CCCGCACGTCCCTCTGCCATTGCAGCAGCTGCAAGGATGCTGTCAAGAAT
GATTTCCGGTATATTTGTGTAGGGACATTGGATGATCCGGAAGTGTTGCC
GCCGAAGGGAGAGTTTTTCTGTCAGAGTAGGGTTCGTTGGATGCCGGAGA
TTCCGGGTGAGTGTCTGGTCTGTCTTGTCTTCATGGTGCGCAATAACTAA
AAAGCTTTCGGAACAAACTACGGTCTAACCGCCAAGGTCCCCAAAGATGC
CCTTCAGATCACATCCGGTAAGCTTAAGGAATACGTGGGTGATAATGGGT
CTGGAAGTATGATACATCGGGAGTTTTGTGGCGATTGTGGGAGCTATATT
TGCGAGTATGGGATGCAATCCTACCCTGGTTCCTGCTTCTGTCACAAAAT
CACCTATAACCTCAACCTCTCGTCTCCCGACGATGCCCGCACGTCCCTCT
GCCATTGCAGCAGCTGCAAGGATGCTGTCAAGAATGATTTCCGGTATATT
TGTGTAGGGACATTGGATGATCCGGAAGTGTTGCCGCCGAAGGGAGAGTT
TTTCTGTCAGAGTAGGGTTCGTTGGATGCCGGAGATTCCGGGTGAGTGTC
TGGTCTGTCTTGTCTTCATGGTGCGCAATAACTAAAAAGCTTTCGGAACA
AACTACGGTCTAACCGCCAAGGTCCCCAAAGATGCCCTTCAGATCACATC
CGGTAAGCTTAAGGAATACGTGGGTGATAATGGGTCTGGAAGTATGATAC
ATCGGGAGTTTTGTGGCGATTGTGGGAGCTATATTTGCGAGTATGGGATG
CAATCCTACCCTGGTTCCTGCTTCTGTCACAAAATCACCTATAACCTCAA
CCTCTCGTCTCCCGACGATGCCCGCACGTCCCTCTGCCATTGCAGCAGCT
GCAAG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0016846carbon-sulfur lyase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ASPNIDRAFT_173659ASPNIDRAFT_173659Aspergillus niger ATCC 1015gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_173659-T1ASPNIDRAFT_173659-T1-proteinAspergillus niger ATCC 1015polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_173659-T1.cdsASPNIDRAFT_173659-T1.cdsAspergillus niger ATCC 1015CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_173659-T1.exon3ASPNIDRAFT_173659-T1.exon3Aspergillus niger ATCC 1015exon
ASPNIDRAFT_173659-T1.exon2ASPNIDRAFT_173659-T1.exon2Aspergillus niger ATCC 1015exon
ASPNIDRAFT_173659-T1.exon1ASPNIDRAFT_173659-T1.exon1Aspergillus niger ATCC 1015exon


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR011057
DBxrefInterPro:IPR006913
DBxrefPFAM:PF04828
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000010.1supercontigACJE01000010.1:271704..272303 -