You are here

Home

ASPNIDRAFT_173899-T1, ASPNIDRAFT_173899-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_173899-T1
Unique NameASPNIDRAFT_173899-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000010.1:76214..77584+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_173899-T1 ID=ASPNIDRAFT_173899-T1|Name=ASPNIDRAFT_173899-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=1371bp|location=Sequence derived from alignment at ACJE01000010.1:76214..77584+ (Aspergillus niger ATCC 1015)
ATGTTGTCCCTAAGAGGAAAGCCCCTGGTCTATCTGGTCACCGTCGTCAG
CTCGACTGGCTTCTGCCTGTTCGGCTACGATAATGGCCTGATGGGCCAGG
TCATCTCAGAGCCCAACTTCCTCAACATGATCGGAAATCCAGACGCAGCC
GTGCAAGGGCTTGCAGTATCATCCTACGACATCGGATGCATGGTAGGGGC
GTTGGCTGCCGTGCTTATTAGTGAGCAGATCGGGAGAAGACGGACGATCT
TACTAGCTTGTGTTGTGCACATTGTGGGAGACGTCGTCAACGCCTCCACC
TTCTCCCTCGCCCAACTTTTGGTGTCGCGTATCATCCTTGGTATCGGTCT
GGGGCTCTTTACGAGTGCCTCTCCCGTCTGGCTGGCCGAGACTGCTACAG
CGCAGATGCGGGCTGTTATGGTGGCCGTGCAGCTGACCTTCCTCATTATC
GGCACGAACATTGCCTACTGGGTCGATTATGGGCTTGGCTTCCTTGACAA
TGAAATCAGCTGGCGTGTACCTTTTGCATTGCAGGCCATCTACCCCATTG
TGGCCTTCGGGTTTACTTTGGTGCTCCCCGAATCCCCTCGATGGCTTGCT
TCCCACGGCCATACTGAGGCTGCCGCCGCCGCTCTATCGGCCTTCCGCGA
TCTGCCAGAGGACCACGAGTTGGTCCAAGCTGAATTGCAGGATATTGCTT
CGGCAATCGCTTTGGAATCGGACGGTGGATCCTGGGGAAGCTTGTTCCGC
CAAGGCCCCAGTAAGGTGCGGACGCGTGTTATTATCGCCTGCGCGGCCAA
CTCGATGCAATCCTACACCGGGATCAACTTTGTGGAGTACTACTTCCCTT
TCATCTTGACCAATTCGGTCGGACTCGGTACCAATCTTGCGAACCTTGTG
TCGGGGTGCTCACAGATCTGGTTCCTCCTATCATCCTTCGTGACGTGGTA
CTATATCAACAAGCTGGGCCGTCGCCGACTGTTCTGCCTGGGTAATCTCG
GGATGGGGTGCTGCATGATTGCGGTGTGTATCACTCTGTGGAAAGATAGT
CAAGTTTCGGTCATCATCACCGTCGTCTTCTTCTTCCTTTATCTCTCGTT
TTTCACTTGGGGATGGATGTCGAACATGTGGACCTATCCTGCGGAGATCC
TACCACTCCATGTCCGCAGTAAAGCGCTGGCACTGTCCGTCTTCTTCCAA
TGGGCAAATCAGTTCTGGACGGTGGAAATTGCGCCCGTCACGATTGACAA
CATCGGCTGGCGAACATATATCATCTGGGCCATTCTTAACTTCGTTTGCT
GCGTGATTGTGTATTTATTTTTTCCGGAAACATCGTCCCTCACGCTCGAG
TCAGTCGATTTCCTATTTTCC
back to top

Coding sequence (CDS) from alignment at ACJE01000010.1:76214..77584+

>ASPNIDRAFT_173899-T1 ID=ASPNIDRAFT_173899-T1|Name=ASPNIDRAFT_173899-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=1371bp|location=Sequence derived from alignment at ACJE01000010.1:76214..77584+ (Aspergillus niger ATCC 1015)
ATGTTGTCCCTAAGAGGAAAGCCCCTGGTCTATCTGGTCACCGTCGTCAG
CTCGACTGGCTTCTGCCTGTTCGGCTACGATAATGGCCTGATGGGCCAGG
TCATCTCAGAGCCCAACTTCCTCAACATGATCGGAAATCCAGACGCAGCC
GTGCAAGGGCTTGCAGTATCATCCTACGACATCGGATGCATGGTAGGGGC
GTTGGCTGCCGTGCTTATTAGTGAGCAGATCGGGAGAAGACGGACGATCT
TACTAGCTTGTGTTGTGCACATTGTGGGAGACGTCGTCAACGCCTCCACC
TTCTCCCTCGCCCAACTTTTGGTGTCGCGTATCATCCTTGGTATCGGTCT
GGGGCTCTTTACGAGTGCCTCTCCCGTCTGGCTGGCCGAGACTGCTACAG
CGCAGATGCGGGCTGTTATGGTGGCCGTGCAGCTGACCTTCCTCATTATC
GGCACGAACATTGCCTACTGGGTCGATTATGGGCTTGGCTTCCTTGACAA
TGAAATCAGCTGGCGTGTACCTTTTGCATTGCAGGCCATCTACCCCATTG
TGGCCTTCGGGTTTACTTTGGTGCTCCCCGAATCCCCTCGATGGCTTGCT
TCCCACGGCCATACTGAGGCTGCCGCCGCCGCTCTATCGGCCTTCCGCGA
TCTGCCAGAGGACCACGAGTTGGTCCAAGCTGAATTGCAGGATATTGCTT
CGGCAATCGCTTTGGAATCGGACGGTGGATCCTGGGGAAGCTTGTTCCGC
CAAGGCCCCAGTAAGGTGCGGACGCGTGTTATTATCGCCTGCGCGGCCAA
CTCGATGCAATCCTACACCGGGATCAACTTTGTGGAGTACTACTTCCCTT
TCATCTTGACCAATTCGGTCGGACTCGGTACCAATCTTGCGAACCTTGTG
TCGGGGTGCTCACAGATCTGGTTCCTCCTATCATCCTTCGTGACGTGGTA
CTATATCAACAAGCTGGGCCGTCGCCGACTGTTCTGCCTGGGTAATCTCG
GGATGGGGTGCTGCATGATTGCGGTGTGTATCACTCTGTGGAAAGATAGT
CAAGTTTCGGTCATCATCACCGTCGTCTTCTTCTTCCTTTATCTCTCGTT
TTTCACTTGGGGATGGATGTCGAACATGTGGACCTATCCTGCGGAGATCC
TACCACTCCATGTCCGCAGTAAAGCGCTGGCACTGTCCGTCTTCTTCCAA
TGGGCAAATCAGTTCTGGACGGTGGAAATTGCGCCCGTCACGATTGACAA
CATCGGCTGGCGAACATATATCATCTGGGCCATTCTTAACTTCGTTTGCT
GCGTGATTGTGTATTTATTTTTTCCGGAAACATCGTCCCTCACGCTCGAG
TCAGTCGATTTCCTATTTTCC
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
GO:0016020membrane
Vocabulary: Biological Process
TermDefinition
GO:0055085transmembrane transport
Vocabulary: Molecular Function
TermDefinition
GO:0022857transmembrane transporter activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ASPNIDRAFT_173899ASPNIDRAFT_173899Aspergillus niger ATCC 1015gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_173899-T1.exon1ASPNIDRAFT_173899-T1.exon1Aspergillus niger ATCC 1015exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_173899-T1.cdsASPNIDRAFT_173899-T1.cdsAspergillus niger ATCC 1015CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_173899-T1ASPNIDRAFT_173899-T1-proteinAspergillus niger ATCC 1015polypeptide


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR036259
DBxrefInterPro:IPR020846
DBxrefInterPro:IPR005829
DBxrefInterPro:IPR005828
DBxrefInterPro:IPR003663
DBxrefPFAM:PF00083
DBxrefPFAM:PF07690
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000010.1supercontigACJE01000010.1:76214..77584 +
Powered by Drupal