You are here

Home

ASPNIDRAFT_174098-T1, ASPNIDRAFT_174098-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_174098-T1
Unique NameASPNIDRAFT_174098-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000010.1:1126193..1127118-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_174098-T1 ID=ASPNIDRAFT_174098-T1|Name=ASPNIDRAFT_174098-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=926bp|location=Sequence derived from alignment at ACJE01000010.1:1126193..1127118- (Aspergillus niger ATCC 1015)
ATGTTCTCGCGCCCGATCTCCTCATGGGGTCGGCTTCCTTGGTCGGGTCC
CGGCCTCCGCCCGTCCACCATGACAAATACACGATGTGTTGACTCTGGGA
GGAGATTCTTCACTCGCAGTTCATGCCTCCGGCAGAATATCAACGCACCG
TTCAATACGCCGCAGTCGCAAAAGCGCAATGCGTCGACGATGTATGTTAA
AGGAGCGCAATGGTGTCTGCAGTTCACGTCTAATAGGTTCTAGGTACTAT
GCGGCCAGTCTTATTCTCGGAACCGTTGCGCTTGCCTATGGCTCCGTCCC
TCTGTACAAAATGGTTCGACAAGCCTGCCCTTGAATTCTAGTCTGCGGCA
GAGGCTAACGGCTCTATTCTTACAGATCTGCCAACAAACCGGTTGGAACG
GTCAACCTGTACTCACTCACCGTGGAGGCGACAATGATACCTCTTCCCGC
GTCACTCCGGTCACCGACTCCCGTCGTTTGAGAATCACATTCAATGGATC
AGTTTCGGATGTTCTGCCGTGGAAGTTCACACCGCAACAACGTGAAGTTC
GAGTTCTTCCAGGCGAGACAGCGCTTGCGTTCTTTACGGCGACGAACAAG
GGCCCGACGGATATCATTGGTGTAGCGACGTACAGTGTCACTCCCGGACA
AGTTGCTCCTTACTTCAGCAAGATCCAATGCTTTTGCTTCGACGAGCAGA
AGCTGAATGCTGGAGAATCGGTTGACATGCCGGTGTTCTTCTTCATCGAC
CCCGACTTTGTCAAAGATCCGGCCATGAAGGGCATTGATACGATTACGCT
CTCATATACCTTCTTCAGTAAGACTCCAGAATGAACCCATGATGGGGTAT
GTTTGTGGCTAATGAAAGCGAAACAGAGGCGCGATATGATGACAACGGTG
TCTTGAAGCCATTGCCGTCGAGCTAA
back to top

Coding sequence (CDS) from alignment at ACJE01000010.1:1126193..1127118-

>ASPNIDRAFT_174098-T1 ID=ASPNIDRAFT_174098-T1|Name=ASPNIDRAFT_174098-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=2748bp|location=Sequence derived from alignment at ACJE01000010.1:1126193..1127118- (Aspergillus niger ATCC 1015)
AGGCGCGATATGATGACAACGGTGTCTTGAAGCCATTGCCGTCGAGCTAA
ATCTGCCAACAAACCGGTTGGAACGGTCAACCTGTACTCACTCACCGTGG
AGGCGACAATGATACCTCTTCCCGCGTCACTCCGGTCACCGACTCCCGTC
GTTTGAGAATCACATTCAATGGATCAGTTTCGGATGTTCTGCCGTGGAAG
TTCACACCGCAACAACGTGAAGTTCGAGTTCTTCCAGGCGAGACAGCGCT
TGCGTTCTTTACGGCGACGAACAAGGGCCCGACGGATATCATTGGTGTAG
CGACGTACAGTGTCACTCCCGGACAAGTTGCTCCTTACTTCAGCAAGATC
CAATGCTTTTGCTTCGACGAGCAGAAGCTGAATGCTGGAGAATCGGTTGA
CATGCCGGTGTTCTTCTTCATCGACCCCGACTTTGTCAAAGATCCGGCCA
TGAAGGGCATTGATACGATTACGCTCTCATATACCTTCTTCAGTTCTAGG
TACTATGCGGCCAGTCTTATTCTCGGAACCGTTGCGCTTGCCTATGGCTC
CGTCCCTCTGTACAAAATGATGTTCTCGCGCCCGATCTCCTCATGGGGTC
GGCTTCCTTGGTCGGGTCCCGGCCTCCGCCCGTCCACCATGACAAATACA
CGATGTGTTGACTCTGGGAGGAGATTCTTCACTCGCAAGGCGCGATATGA
TGACAACGGTGTCTTGAAGCCATTGCCGTCGAGCTAAATCTGCCAACAAA
CCGGTTGGAACGGTCAACCTGTACTCACTCACCGTGGAGGCGACAATGAT
ACCTCTTCCCGCGTCACTCCGGTCACCGACTCCCGTCGTTTGAGAATCAC
ATTCAATGGATCAGTTTCGGATGTTCTGCCGTGGAAGTTCACACCGCAAC
AACGTGAAGTTCGAGTTCTTCCAGGCGAGACAGCGCTTGCGTTCTTTACG
GCGACGAACAAGGGCCCGACGGATATCATTGGTGTAGCGACGTACAGTGT
CACTCCCGGACAAGTTGCTCCTTACTTCAGCAAGATCCAATGCTTTTGCT
TCGACGAGCAGAAGCTGAATGCTGGAGAATCGGTTGACATGCCGGTGTTC
TTCTTCATCGACCCCGACTTTGTCAAAGATCCGGCCATGAAGGGCATTGA
TACGATTACGCTCTCATATACCTTCTTCAGTTCTAGGTACTATGCGGCCA
GTCTTATTCTCGGAACCGTTGCGCTTGCCTATGGCTCCGTCCCTCTGTAC
AAAATGATGTTCTCGCGCCCGATCTCCTCATGGGGTCGGCTTCCTTGGTC
GGGTCCCGGCCTCCGCCCGTCCACCATGACAAATACACGATGTGTTGACT
CTGGGAGGAGATTCTTCACTCGCAAGGCGCGATATGATGACAACGGTGTC
TTGAAGCCATTGCCGTCGAGCTAAATCTGCCAACAAACCGGTTGGAACGG
TCAACCTGTACTCACTCACCGTGGAGGCGACAATGATACCTCTTCCCGCG
TCACTCCGGTCACCGACTCCCGTCGTTTGAGAATCACATTCAATGGATCA
GTTTCGGATGTTCTGCCGTGGAAGTTCACACCGCAACAACGTGAAGTTCG
AGTTCTTCCAGGCGAGACAGCGCTTGCGTTCTTTACGGCGACGAACAAGG
GCCCGACGGATATCATTGGTGTAGCGACGTACAGTGTCACTCCCGGACAA
GTTGCTCCTTACTTCAGCAAGATCCAATGCTTTTGCTTCGACGAGCAGAA
GCTGAATGCTGGAGAATCGGTTGACATGCCGGTGTTCTTCTTCATCGACC
CCGACTTTGTCAAAGATCCGGCCATGAAGGGCATTGATACGATTACGCTC
TCATATACCTTCTTCAGTTCTAGGTACTATGCGGCCAGTCTTATTCTCGG
AACCGTTGCGCTTGCCTATGGCTCCGTCCCTCTGTACAAAATGATGTTCT
CGCGCCCGATCTCCTCATGGGGTCGGCTTCCTTGGTCGGGTCCCGGCCTC
CGCCCGTCCACCATGACAAATACACGATGTGTTGACTCTGGGAGGAGATT
CTTCACTCGCAAGGCGCGATATGATGACAACGGTGTCTTGAAGCCATTGC
CGTCGAGCTAAATCTGCCAACAAACCGGTTGGAACGGTCAACCTGTACTC
ACTCACCGTGGAGGCGACAATGATACCTCTTCCCGCGTCACTCCGGTCAC
CGACTCCCGTCGTTTGAGAATCACATTCAATGGATCAGTTTCGGATGTTC
TGCCGTGGAAGTTCACACCGCAACAACGTGAAGTTCGAGTTCTTCCAGGC
GAGACAGCGCTTGCGTTCTTTACGGCGACGAACAAGGGCCCGACGGATAT
CATTGGTGTAGCGACGTACAGTGTCACTCCCGGACAAGTTGCTCCTTACT
TCAGCAAGATCCAATGCTTTTGCTTCGACGAGCAGAAGCTGAATGCTGGA
GAATCGGTTGACATGCCGGTGTTCTTCTTCATCGACCCCGACTTTGTCAA
AGATCCGGCCATGAAGGGCATTGATACGATTACGCTCTCATATACCTTCT
TCAGTTCTAGGTACTATGCGGCCAGTCTTATTCTCGGAACCGTTGCGCTT
GCCTATGGCTCCGTCCCTCTGTACAAAATGATGTTCTCGCGCCCGATCTC
CTCATGGGGTCGGCTTCCTTGGTCGGGTCCCGGCCTCCGCCCGTCCACCA
TGACAAATACACGATGTGTTGACTCTGGGAGGAGATTCTTCACTCGCA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005507copper ion binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ASPNIDRAFT_174098ASPNIDRAFT_174098Aspergillus niger ATCC 1015gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_174098-T1ASPNIDRAFT_174098-T1-proteinAspergillus niger ATCC 1015polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_174098-T1.cdsASPNIDRAFT_174098-T1.cdsAspergillus niger ATCC 1015CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_174098-T1.exon4ASPNIDRAFT_174098-T1.exon4Aspergillus niger ATCC 1015exon
ASPNIDRAFT_174098-T1.exon3ASPNIDRAFT_174098-T1.exon3Aspergillus niger ATCC 1015exon
ASPNIDRAFT_174098-T1.exon2ASPNIDRAFT_174098-T1.exon2Aspergillus niger ATCC 1015exon
ASPNIDRAFT_174098-T1.exon1ASPNIDRAFT_174098-T1.exon1Aspergillus niger ATCC 1015exon


Properties
Property NameValue
DBxrefInterPro:IPR023471
DBxrefInterPro:IPR007533
DBxrefPFAM:PF04442
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000010.1supercontigACJE01000010.1:1126193..1127118 -
Powered by Drupal