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ASPNIDRAFT_175133-T1, ASPNIDRAFT_175133-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_175133-T1
Unique NameASPNIDRAFT_175133-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000010.1:2695043..2696675-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_175133-T1 ID=ASPNIDRAFT_175133-T1|Name=ASPNIDRAFT_175133-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=1633bp|location=Sequence derived from alignment at ACJE01000010.1:2695043..2696675- (Aspergillus niger ATCC 1015)
ATGATTTTCGAGGAGCAACGGTTTATCCACGAGGACCTTGAGCGCCTAGA
GCAGGCGATTGCCGACCGCGTTGCCGAAGAGCCTCGTAATGTAAGTAACT
CTGCAGTCTCTATCTCGTCGCTCTCTGCTAACTCACTCCTTTACTTTCAG
ATTCGGGATCGCTTGGCTCGCGATCATGAAGTCGCACATTTCTTAAAGCG
TATAGAAGACCAGTCCAAGAGGTTGCTCGACATCTACAAGGATGCAGACG
GCGCGCGTGAGAAGGAAATCCAAACCATCTCAACCGGCGATCAATTCGAG
GAGTTCTACAAGCAACTGGATGAGATCAAGGACTTCCATAAGCGCTACCC
TAATGAGCCAGTGGAAAACCTTGAACGGGCATATAAGCGTCGTCAGCCCG
GAGAGGGTGAAGTAACGGGCATGGAGATCGACAATCTATTCACCGGTGAA
GAGGGTTATGGACAGTTTCTGGACCTCACAACACTGCACGAAGACTACCT
CAATTTGCCTGGGGTCAAACGGCTCTCATATGTACAATACCTCGACATAT
TCGATGCGTTTACTCCTCCGCAACTTCCGATTAAGCGAAACAACAAACTT
TCCGATCGGTATTTCAAGTATGTCGGCGAACTTGCAAACTACTTGGAAAG
CTTCATCAAGAAAGTGAAGCCGTTACAAGATCTGGACAAACTTTTTGCTA
GCTTTGATGAGGAGTTCGAGAAGCAATGGACGGCGAATCAGGTACCTGGT
TGGACGGAGGAGGTTGCTGAAAATGGTAACCAAGGTCCGAAGACCGAGGG
CTCCGGAGAAGGCATCTGGTGTGCTGACTGCGAGAGGGAGTTCAAGAATG
AGAATGTCTATAAGAATCACTTGACAGGCAAAAAGCACATTCGGGCCGCT
GAAGCTCGCAAAGCTGCCGGGGATACTGGCGCGAAACCGGCAGCCCCTGC
GACGAACGGCGCATCATCCGTGGCTCATCGTCTTAAGGAACGTGCAGTCG
CAGAGAGGGAACATCGGGTGCGTTCTCTGACGCAGGTACTGCAGCCCGAG
CGTGTAGCGACGAGGATGAACGTGGAGCGGAGACAGGGTATGACTGAACG
GGAGCGCCAGATGGAACTTGAAGCTCTGCTTAATGAGTCTGAGAACCCTG
GCGGTGATCGTGCTGGCGATCAATCTGACGAGGACGACGAAGACCGAATC
TACAATCCCCTCAAACTGCCACTTGCTTGGGACGGCAAGCCAATTCCCTA
CTGGCTTTACAAGCTGCATGGCCTGGGGGTGGAGTATCCTTGCGAGATCT
GCGGTAACTTTGTGTATATGGGCCGTCGAGCTTTTGACAAGCATTTCTCA
GAGGCCCTACATATCTTTGGTTTGAAGTGTCTTGGTATCACTTCTAATAC
CAACCTTTTCCGTGAAATCACTCGGATTGAGGATGCAATCAGGCTTTGGG
AGAAATTAGAGCAGGACCGCAAGAAGGATAGAGATAATCGCGACAATGTG
GTACAGATGGAGGACGCCGAAGGCAATGTGATGCCGGAGAGGATCTACCT
TGAGTACGTGCCCCCAACAGTTCCGCGGCCTAATGGAACCTTTACTAATG
TTTACCAGTCTGCAAAAGCAAGGTATACTGTAA
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Coding sequence (CDS) from alignment at ACJE01000010.1:2695043..2696675-

>ASPNIDRAFT_175133-T1 ID=ASPNIDRAFT_175133-T1|Name=ASPNIDRAFT_175133-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=4554bp|location=Sequence derived from alignment at ACJE01000010.1:2695043..2696675- (Aspergillus niger ATCC 1015)
TCTGCAAAAGCAAGGTATACTGTAAATTCGGGATCGCTTGGCTCGCGATC
ATGAAGTCGCACATTTCTTAAAGCGTATAGAAGACCAGTCCAAGAGGTTG
CTCGACATCTACAAGGATGCAGACGGCGCGCGTGAGAAGGAAATCCAAAC
CATCTCAACCGGCGATCAATTCGAGGAGTTCTACAAGCAACTGGATGAGA
TCAAGGACTTCCATAAGCGCTACCCTAATGAGCCAGTGGAAAACCTTGAA
CGGGCATATAAGCGTCGTCAGCCCGGAGAGGGTGAAGTAACGGGCATGGA
GATCGACAATCTATTCACCGGTGAAGAGGGTTATGGACAGTTTCTGGACC
TCACAACACTGCACGAAGACTACCTCAATTTGCCTGGGGTCAAACGGCTC
TCATATGTACAATACCTCGACATATTCGATGCGTTTACTCCTCCGCAACT
TCCGATTAAGCGAAACAACAAACTTTCCGATCGGTATTTCAAGTATGTCG
GCGAACTTGCAAACTACTTGGAAAGCTTCATCAAGAAAGTGAAGCCGTTA
CAAGATCTGGACAAACTTTTTGCTAGCTTTGATGAGGAGTTCGAGAAGCA
ATGGACGGCGAATCAGGTACCTGGTTGGACGGAGGAGGTTGCTGAAAATG
GTAACCAAGGTCCGAAGACCGAGGGCTCCGGAGAAGGCATCTGGTGTGCT
GACTGCGAGAGGGAGTTCAAGAATGAGAATGTCTATAAGAATCACTTGAC
AGGCAAAAAGCACATTCGGGCCGCTGAAGCTCGCAAAGCTGCCGGGGATA
CTGGCGCGAAACCGGCAGCCCCTGCGACGAACGGCGCATCATCCGTGGCT
CATCGTCTTAAGGAACGTGCAGTCGCAGAGAGGGAACATCGGGTGCGTTC
TCTGACGCAGGTACTGCAGCCCGAGCGTGTAGCGACGAGGATGAACGTGG
AGCGGAGACAGGGTATGACTGAACGGGAGCGCCAGATGGAACTTGAAGCT
CTGCTTAATGAGTCTGAGAACCCTGGCGGTGATCGTGCTGGCGATCAATC
TGACGAGGACGACGAAGACCGAATCTACAATCCCCTCAAACTGCCACTTG
CTTGGGACGGCAAGCCAATTCCCTACTGGCTTTACAAGCTGCATGGCCTG
GGGGTGGAGTATCCTTGCGAGATCTGCGGTAACTTTGTGTATATGGGCCG
TCGAGCTTTTGACAAGCATTTCTCAGAGGCCCTACATATCTTTGGTTTGA
AGTGTCTTGGTATCACTTCTAATACCAACCTTTTCCGTGAAATCACTCGG
ATTGAGGATGCAATCAGGCTTTGGGAGAAATTAGAGCAGGACCGCAAGAA
GGATAGAGATAATCGCGACAATGTGGTACAGATGGAGGACGCCGAAGGCA
ATGTGATGCCGGAGAGGATCTACCTTGAATGATTTTCGAGGAGCAACGGT
TTATCCACGAGGACCTTGAGCGCCTAGAGCAGGCGATTGCCGACCGCGTT
GCCGAAGAGCCTCGTAATTCTGCAAAAGCAAGGTATACTGTAAATTCGGG
ATCGCTTGGCTCGCGATCATGAAGTCGCACATTTCTTAAAGCGTATAGAA
GACCAGTCCAAGAGGTTGCTCGACATCTACAAGGATGCAGACGGCGCGCG
TGAGAAGGAAATCCAAACCATCTCAACCGGCGATCAATTCGAGGAGTTCT
ACAAGCAACTGGATGAGATCAAGGACTTCCATAAGCGCTACCCTAATGAG
CCAGTGGAAAACCTTGAACGGGCATATAAGCGTCGTCAGCCCGGAGAGGG
TGAAGTAACGGGCATGGAGATCGACAATCTATTCACCGGTGAAGAGGGTT
ATGGACAGTTTCTGGACCTCACAACACTGCACGAAGACTACCTCAATTTG
CCTGGGGTCAAACGGCTCTCATATGTACAATACCTCGACATATTCGATGC
GTTTACTCCTCCGCAACTTCCGATTAAGCGAAACAACAAACTTTCCGATC
GGTATTTCAAGTATGTCGGCGAACTTGCAAACTACTTGGAAAGCTTCATC
AAGAAAGTGAAGCCGTTACAAGATCTGGACAAACTTTTTGCTAGCTTTGA
TGAGGAGTTCGAGAAGCAATGGACGGCGAATCAGGTACCTGGTTGGACGG
AGGAGGTTGCTGAAAATGGTAACCAAGGTCCGAAGACCGAGGGCTCCGGA
GAAGGCATCTGGTGTGCTGACTGCGAGAGGGAGTTCAAGAATGAGAATGT
CTATAAGAATCACTTGACAGGCAAAAAGCACATTCGGGCCGCTGAAGCTC
GCAAAGCTGCCGGGGATACTGGCGCGAAACCGGCAGCCCCTGCGACGAAC
GGCGCATCATCCGTGGCTCATCGTCTTAAGGAACGTGCAGTCGCAGAGAG
GGAACATCGGGTGCGTTCTCTGACGCAGGTACTGCAGCCCGAGCGTGTAG
CGACGAGGATGAACGTGGAGCGGAGACAGGGTATGACTGAACGGGAGCGC
CAGATGGAACTTGAAGCTCTGCTTAATGAGTCTGAGAACCCTGGCGGTGA
TCGTGCTGGCGATCAATCTGACGAGGACGACGAAGACCGAATCTACAATC
CCCTCAAACTGCCACTTGCTTGGGACGGCAAGCCAATTCCCTACTGGCTT
TACAAGCTGCATGGCCTGGGGGTGGAGTATCCTTGCGAGATCTGCGGTAA
CTTTGTGTATATGGGCCGTCGAGCTTTTGACAAGCATTTCTCAGAGGCCC
TACATATCTTTGGTTTGAAGTGTCTTGGTATCACTTCTAATACCAACCTT
TTCCGTGAAATCACTCGGATTGAGGATGCAATCAGGCTTTGGGAGAAATT
AGAGCAGGACCGCAAGAAGGATAGAGATAATCGCGACAATGTGGTACAGA
TGGAGGACGCCGAAGGCAATGTGATGCCGGAGAGGATCTACCTTGAATGA
TTTTCGAGGAGCAACGGTTTATCCACGAGGACCTTGAGCGCCTAGAGCAG
GCGATTGCCGACCGCGTTGCCGAAGAGCCTCGTAATTCTGCAAAAGCAAG
GTATACTGTAAATTCGGGATCGCTTGGCTCGCGATCATGAAGTCGCACAT
TTCTTAAAGCGTATAGAAGACCAGTCCAAGAGGTTGCTCGACATCTACAA
GGATGCAGACGGCGCGCGTGAGAAGGAAATCCAAACCATCTCAACCGGCG
ATCAATTCGAGGAGTTCTACAAGCAACTGGATGAGATCAAGGACTTCCAT
AAGCGCTACCCTAATGAGCCAGTGGAAAACCTTGAACGGGCATATAAGCG
TCGTCAGCCCGGAGAGGGTGAAGTAACGGGCATGGAGATCGACAATCTAT
TCACCGGTGAAGAGGGTTATGGACAGTTTCTGGACCTCACAACACTGCAC
GAAGACTACCTCAATTTGCCTGGGGTCAAACGGCTCTCATATGTACAATA
CCTCGACATATTCGATGCGTTTACTCCTCCGCAACTTCCGATTAAGCGAA
ACAACAAACTTTCCGATCGGTATTTCAAGTATGTCGGCGAACTTGCAAAC
TACTTGGAAAGCTTCATCAAGAAAGTGAAGCCGTTACAAGATCTGGACAA
ACTTTTTGCTAGCTTTGATGAGGAGTTCGAGAAGCAATGGACGGCGAATC
AGGTACCTGGTTGGACGGAGGAGGTTGCTGAAAATGGTAACCAAGGTCCG
AAGACCGAGGGCTCCGGAGAAGGCATCTGGTGTGCTGACTGCGAGAGGGA
GTTCAAGAATGAGAATGTCTATAAGAATCACTTGACAGGCAAAAAGCACA
TTCGGGCCGCTGAAGCTCGCAAAGCTGCCGGGGATACTGGCGCGAAACCG
GCAGCCCCTGCGACGAACGGCGCATCATCCGTGGCTCATCGTCTTAAGGA
ACGTGCAGTCGCAGAGAGGGAACATCGGGTGCGTTCTCTGACGCAGGTAC
TGCAGCCCGAGCGTGTAGCGACGAGGATGAACGTGGAGCGGAGACAGGGT
ATGACTGAACGGGAGCGCCAGATGGAACTTGAAGCTCTGCTTAATGAGTC
TGAGAACCCTGGCGGTGATCGTGCTGGCGATCAATCTGACGAGGACGACG
AAGACCGAATCTACAATCCCCTCAAACTGCCACTTGCTTGGGACGGCAAG
CCAATTCCCTACTGGCTTTACAAGCTGCATGGCCTGGGGGTGGAGTATCC
TTGCGAGATCTGCGGTAACTTTGTGTATATGGGCCGTCGAGCTTTTGACA
AGCATTTCTCAGAGGCCCTACATATCTTTGGTTTGAAGTGTCTTGGTATC
ACTTCTAATACCAACCTTTTCCGTGAAATCACTCGGATTGAGGATGCAAT
CAGGCTTTGGGAGAAATTAGAGCAGGACCGCAAGAAGGATAGAGATAATC
GCGACAATGTGGTACAGATGGAGGACGCCGAAGGCAATGTGATGCCGGAG
AGGATCTACCTTGAATGATTTTCGAGGAGCAACGGTTTATCCACGAGGAC
CTTGAGCGCCTAGAGCAGGCGATTGCCGACCGCGTTGCCGAAGAGCCTCG
TAAT
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ASPNIDRAFT_175133ASPNIDRAFT_175133Aspergillus niger ATCC 1015gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_175133-T1ASPNIDRAFT_175133-T1-proteinAspergillus niger ATCC 1015polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_175133-T1.cdsASPNIDRAFT_175133-T1.cdsAspergillus niger ATCC 1015CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_175133-T1.exon3ASPNIDRAFT_175133-T1.exon3Aspergillus niger ATCC 1015exon
ASPNIDRAFT_175133-T1.exon2ASPNIDRAFT_175133-T1.exon2Aspergillus niger ATCC 1015exon
ASPNIDRAFT_175133-T1.exon1ASPNIDRAFT_175133-T1.exon1Aspergillus niger ATCC 1015exon


Properties
Property NameValue
DBxrefInterPro:IPR036236
DBxrefInterPro:IPR013087
DBxrefInterPro:IPR024598
DBxrefInterPro:IPR022755
DBxrefInterPro:IPR021966
DBxrefInterPro:IPR031774
DBxrefPFAM:PF12874
DBxrefPFAM:PF12171
DBxrefPFAM:PF12108
DBxrefPFAM:PF16837
DBxrefPFAM:PF11931
Product subunit 3
Productsplicing factor 3a
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000010.1supercontigACJE01000010.1:2695043..2696675 -
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