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ASPNIDRAFT_175395-T1, ASPNIDRAFT_175395-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_175395-T1
Unique NameASPNIDRAFT_175395-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000010.1:1083323..1084521-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_175395-T1 ID=ASPNIDRAFT_175395-T1|Name=ASPNIDRAFT_175395-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=1199bp|location=Sequence derived from alignment at ACJE01000010.1:1083323..1084521- (Aspergillus niger ATCC 1015)
ATGTTCTCTCAGATTGTGACAGCAGCAAAGGGGTTATTTTCTCGACAGGA
CTCCGACGAATCTTCCCTCAAAAATCTGCGCCCTACAGCTACTATCACCA
CCTCCGGCGCCCCATCTGGAATCAAAAGCAGCCCCAACATACCCAAAATG
GTCACAGCAACAAGACAGCGGAAATTCCCCGCTGAGCAACAACAATCCTC
GACAGAGCCCGAAGTCAATGGATCGAATGGAAAGCGCAAGTCCGAACCCG
TGGGCGCTGAACCCACTGAGACTCAGAGCAAGAACAAGCGGCGGAAGAGA
AGCAGTCTAGAGGCGACGACACAAGAATCGGAGAGCAAACCTTCGAGTAA
CAAGAAGTCGAAGAAGATGACGGAACCGACTGAGGAGCCTGAGGAACAGC
AAGAGGAGGAAAAGAAACCTTCAGCAGCGCCGGCGGCGAAGAAGCACTTC
CGCTTTGATAGCGAGGAGCCGGAAATCCCGGAGGTTGCGGCTGTTGAGGA
TACCACGGAGGCGCAACAGGATCAGGATGATGAGAGCAGTGATGATGATG
AGGCCCCAGAGACGGTCGACAACTCTGCACAGCTGTCGAAGATGAGGATG
GAAGCTAAGAAGCAGGAACGGGCTAGGCAAATGTGAGTGATGCGCGCGAT
TTCAGCCTTGGTGCTGTTTCTGGATACGATTCTAACGTTTTCTACAGAGA
GGAGCAATTGAAGCGGGACAAACGGAAACAGTTGGATGAGTTGCGCAAAT
CCCAGGCGAAGTTGGCGAAGAAAAAGGAAGCAAAGGCCGAAGATCTGTTG
TCGGAAAGCACAGAGACCCTCCAAGGAACTACTACGCAAGATGCACGACG
CTCGGCCCTCCCTGCTCTTCTTCCCGATGATATCCTCAATGCGGCCCCCG
ATGTCCGGCCCCCGACACCTCCCGCGGAAGAGAGGACTATCATGCAGAAG
AAGCCCAACAAGCTACGATTCTTGGACAAGAAGGAGAAGCCGCCGAAGGA
TGCGCGGGTGGGAGATGTTACTATCCGGGTGTTGGATGATGGTGTATCCA
AAAAGCCCTCAAAGACGGTTCTGCCGCCTAAGGCCTCAAAAACCGGGCGC
AATGCCAAGCAGAATTGGCTGAACAAATCCCGCAACACAGGCGCTTTGAA
TGGGTTGAGAAGGACGACTGGCGGTTCCTCGGGATTCGTGCGCAAATAG
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Coding sequence (CDS) from alignment at ACJE01000010.1:1083323..1084521-

>ASPNIDRAFT_175395-T1 ID=ASPNIDRAFT_175395-T1|Name=ASPNIDRAFT_175395-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=2268bp|location=Sequence derived from alignment at ACJE01000010.1:1083323..1084521- (Aspergillus niger ATCC 1015)
AGAGGAGCAATTGAAGCGGGACAAACGGAAACAGTTGGATGAGTTGCGCA
AATCCCAGGCGAAGTTGGCGAAGAAAAAGGAAGCAAAGGCCGAAGATCTG
TTGTCGGAAAGCACAGAGACCCTCCAAGGAACTACTACGCAAGATGCACG
ACGCTCGGCCCTCCCTGCTCTTCTTCCCGATGATATCCTCAATGCGGCCC
CCGATGTCCGGCCCCCGACACCTCCCGCGGAAGAGAGGACTATCATGCAG
AAGAAGCCCAACAAGCTACGATTCTTGGACAAGAAGGAGAAGCCGCCGAA
GGATGCGCGGGTGGGAGATGTTACTATCCGGGTGTTGGATGATGGTGTAT
CCAAAAAGCCCTCAAAGACGGTTCTGCCGCCTAAGGCCTCAAAAACCGGG
CGCAATGCCAAGCAGAATTGGCTGAACAAATCCCGCAACACAGGCGCTTT
GAATGGGTTGAGAAGGACGACTGGCGGTTCCTCGGGATTCGTGCGCAAAT
AGATGTTCTCTCAGATTGTGACAGCAGCAAAGGGGTTATTTTCTCGACAG
GACTCCGACGAATCTTCCCTCAAAAATCTGCGCCCTACAGCTACTATCAC
CACCTCCGGCGCCCCATCTGGAATCAAAAGCAGCCCCAACATACCCAAAA
TGGTCACAGCAACAAGACAGCGGAAATTCCCCGCTGAGCAACAACAATCC
TCGACAGAGCCCGAAGTCAATGGATCGAATGGAAAGCGCAAGTCCGAACC
CGTGGGCGCTGAACCCACTGAGACTCAGAGCAAGAACAAGCGGCGGAAGA
GAAGCAGTCTAGAGGCGACGACACAAGAATCGGAGAGCAAACCTTCGAGT
AACAAGAAGTCGAAGAAGATGACGGAACCGACTGAGGAGCCTGAGGAACA
GCAAGAGGAGGAAAAGAAACCTTCAGCAGCGCCGGCGGCGAAGAAGCACT
TCCGCTTTGATAGCGAGGAGCCGGAAATCCCGGAGGTTGCGGCTGTTGAG
GATACCACGGAGGCGCAACAGGATCAGGATGATGAGAGCAGTGATGATGA
TGAGGCCCCAGAGACGGTCGACAACTCTGCACAGCTGTCGAAGATGAGGA
TGGAAGCTAAGAAGCAGGAACGGGCTAGGCAAATAGAGGAGCAATTGAAG
CGGGACAAACGGAAACAGTTGGATGAGTTGCGCAAATCCCAGGCGAAGTT
GGCGAAGAAAAAGGAAGCAAAGGCCGAAGATCTGTTGTCGGAAAGCACAG
AGACCCTCCAAGGAACTACTACGCAAGATGCACGACGCTCGGCCCTCCCT
GCTCTTCTTCCCGATGATATCCTCAATGCGGCCCCCGATGTCCGGCCCCC
GACACCTCCCGCGGAAGAGAGGACTATCATGCAGAAGAAGCCCAACAAGC
TACGATTCTTGGACAAGAAGGAGAAGCCGCCGAAGGATGCGCGGGTGGGA
GATGTTACTATCCGGGTGTTGGATGATGGTGTATCCAAAAAGCCCTCAAA
GACGGTTCTGCCGCCTAAGGCCTCAAAAACCGGGCGCAATGCCAAGCAGA
ATTGGCTGAACAAATCCCGCAACACAGGCGCTTTGAATGGGTTGAGAAGG
ACGACTGGCGGTTCCTCGGGATTCGTGCGCAAATAGATGTTCTCTCAGAT
TGTGACAGCAGCAAAGGGGTTATTTTCTCGACAGGACTCCGACGAATCTT
CCCTCAAAAATCTGCGCCCTACAGCTACTATCACCACCTCCGGCGCCCCA
TCTGGAATCAAAAGCAGCCCCAACATACCCAAAATGGTCACAGCAACAAG
ACAGCGGAAATTCCCCGCTGAGCAACAACAATCCTCGACAGAGCCCGAAG
TCAATGGATCGAATGGAAAGCGCAAGTCCGAACCCGTGGGCGCTGAACCC
ACTGAGACTCAGAGCAAGAACAAGCGGCGGAAGAGAAGCAGTCTAGAGGC
GACGACACAAGAATCGGAGAGCAAACCTTCGAGTAACAAGAAGTCGAAGA
AGATGACGGAACCGACTGAGGAGCCTGAGGAACAGCAAGAGGAGGAAAAG
AAACCTTCAGCAGCGCCGGCGGCGAAGAAGCACTTCCGCTTTGATAGCGA
GGAGCCGGAAATCCCGGAGGTTGCGGCTGTTGAGGATACCACGGAGGCGC
AACAGGATCAGGATGATGAGAGCAGTGATGATGATGAGGCCCCAGAGACG
GTCGACAACTCTGCACAGCTGTCGAAGATGAGGATGGAAGCTAAGAAGCA
GGAACGGGCTAGGCAAAT
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0030515snoRNA binding
Vocabulary: Biological Process
TermDefinition
GO:0006364rRNA processing
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ASPNIDRAFT_175395ASPNIDRAFT_175395Aspergillus niger ATCC 1015gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_175395-T1ASPNIDRAFT_175395-T1-proteinAspergillus niger ATCC 1015polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_175395-T1.cdsASPNIDRAFT_175395-T1.cdsAspergillus niger ATCC 1015CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_175395-T1.exon2ASPNIDRAFT_175395-T1.exon2Aspergillus niger ATCC 1015exon
ASPNIDRAFT_175395-T1.exon1ASPNIDRAFT_175395-T1.exon1Aspergillus niger ATCC 1015exon


Properties
Property NameValue
DBxrefInterPro:IPR013268
DBxrefPFAM:PF08297
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000010.1supercontigACJE01000010.1:1083323..1084521 -
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